CmaCh04G002610 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G002610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger CCCH domain-containing protein 11
Location	Cma_Chr04 : 1281395 .. 1284103 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATTTGCTTATTCCAGCGTGCAAAAGTTAAAACCACTACTCCCATTACACCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGAATGAAAGAGATGCTGGTTTGGCTGCACAACAAGCAGAGAGAGCTAAGAATGATCGCATGAGGTTTCTACATTACTCATATAGTTAATTTTACTTTTAAAGGTAATTAATAGTCATATAAGTTCCATTTTGTTCTTCAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGATGACGCCGAGGCGTATGAAAAATATCAGCGAGAAGAACCTGAAGCTGACGATGAACAAAAGGTAATTCTATGTGTGAAATTCGTACAGATTGCTTGTTGCTTCAGTCATTTGCGATTCTGGCTCATGAGTTATGCCGAACAGTTTGTTCATGGCCGTGTCCTTAGTTTACAACATTACCTTGCCAGTCAAATTTCCTTCCATGCTGTCTGGTTAATGAGTTTTCTATCCCTTTATGCCCTCTATTTTTCATGTGTTTCTGTAGTGTCTTCCCCTCCTCACTCTCTGGTTCAAGAACGAATGTTATGGATCCAAAAAGAAATAGGAAAAGGAGTACAAGTAATTCTAGTCCACTAAGAGACCAAGGGGGATGACTGAACGGCCCTCTAGTTGTTTAATATTAAATAGTGAAATTACAAGAAAACCTTTTTGAGGTTTCACTACTTTGAGGCTTAAAACTAGTTAAAATCCTAACTCTAACCCATACGGATTGAATAATTCTCTTCTCTCCCCCAAAGATAGACACCATCATATAGCTGTGTAAGCCCATTCATATAAAGGCTTCAACTTGGTTAATTGAACAAACTATATCAGTAGAATTTGCCCGATCTCACCCTTTGAAGTTACAAAAATTGAAGAATATCCATATTCTTTCGGAAGAAGGGAAGTAGCATAAGTGGTGTATTTGGTTTTCATTATATGCACAAGTGATATGTTTGGTTTTCATTATACTTGTTGCAAAGAACTCACCAGCTTGGGAAATGATTGAACAGTGGTTGTTCTCCTAGCAATGGTCCACCGAGTATTTAACTTTCTACAAATTGCTGATAAAACAAAGACTTTCACCTTCTTAGGAGCTTTGAAGTTCCGTAGTTCATTGGAGAGTGATCTTGTAATAACCTCCAACTGCTTGGCAAGGCAGTCAAACAAAATCTTACTAGTGAATGTCCTTGGTTTATCTAATTTCTGAATTCGGTTATCACATTAGCTATTCTAACACACAAAAATCAATCTGTCGGTGAGGCTGGATCACCTCCACCTTTCTATGGATGAGGTTCCTCCTGAAATATTTTTCTAATATCTGCAAGTGTATTGGGTCAATTTTGTGCACTCCGACTAATCTTATGGGACAACTGCATTGCCTAGAAAATTTATAGGATTTTAAATCCTAGGAAGTAGCCACCATGATTTCTCTTGGCCATAACAAGCACTAGGCCTTGAATAGGAGATCTCAATTCTCAACCACCATCTTCCAATCCAAGTGCGCCATCAATGATTGTACTTGTTAATTGGAAGTATGACAATCTACTCTATCCTCCCATTCTAATGAAATCTCTTAATCGTCCATCAATCTTATCAACCTTCAACAGAATCGTGAAGATGTGAGAGATGGTGAATTTCTAAAGCTTTCGGGTTCAAAGGTGTGCATGATTGATATAGCTTCTTTCAAAAGAATGCCTTCATTGATCTTTGTAGCTCATTCTTCCCAAGATCTGATACCTAAAACTTATGAGACAGTAGGATTTCTTTGATGAGAATACAATTACGCGGATACCCTTGCTCCACCTTGGATCTTCATTGATTACAAAATTGGTCCTAGATAGATAGCAGTTAGAGAAAGGAACTCTGTCCATAAAGCAACACTTGAAGCTTCGATATACCAATCAAAGCTTTGTAGACGTTCCTTCTCAAGACTCTTCATGTCTATTGCATCTCAATCACTGTGAAAATCATTTGAGAGGGCAAGTCGTTGGAAAACGAAGCCTGCACTCAAGGCCATTGTTAGCACCAAACAGGTCCCCCCTTGGCCTTCCATTTAGTGGGGGATAGATCTGGTAGGAGCATTCCCAATTAGCGGTTGGGCAAAAGCAGCATTCAATTATGGACTTAAGATTAAAAGTTTTATCATTCAAGAATAGTTATGAAGTCTAGGCATTCTACTTTTGGGGCATTAAGCTTCAAATATTCTTATATCCTTTTTTTTACCCCGTGCAATTTCAGGCCAAGGATAATTCAACGGGTAGACCCACTTCCTCAACAAGTGCTGTGGATGATTCTGAGGATGTTCTCTTGGATGATGACGACGACGACGACGACGAACTAGATCTTGACGAGCTAAACGAGCTTGAGGCAAGTTTATCTAGAACGTCAATTCAGATCCGGGAGCCAGGTATTGAGCCCTCTTGAGACATTTGTTCATTACTGCGGAGTATGTGTTTGTAATCTAATCTGGTAAAGAATTGAAGAACATAATGGATTTGAGTTTATGTTCTCTTATTTAGAAGTGGAATGACTCCAATGGTTGCCATATAACATATTCAAATTTTGACTCCCTGTTCTTCTGTTTGCCCCTTTAGCCTCAGTGTAAACAAGCTATTACTGGTTTGCAATAATTTCGACTCCACTTGTAATTGTGCTCGTTTTTTCACCATTTCGTTAT

mRNA sequence

ATGTTTATTTGCTTATTCCAGCGTGCAAAAGTTAAAACCACTACTCCCATTACACCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGAATGAAAGAGATGCTGGTTTGGCTGCACAACAAGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGATGACGCCGAGGCGTATGAAAAATATCAGCGAGAAGAACCTGAAGCTGACGATGAACAAAAGGCCAAGGATAATTCAACGGGTAGACCCACTTCCTCAACAAGTGCTGTGGATGATTCTGAGGATGTTCTCTTGGATGATGACGACGACGACGACGACGAACTAGATCTTGACGAGCTAAACGAGCTTGAGGCAAGTTTATCTAGAACGTCAATTCAGATCCGGGAGCCAGGTATTGAGCCCTCTTGAGACATTTGTTCATTACTGCGGAGTATGTGTTTGTAATCTAATCTGGTAAAGAATTGAAGAACATAATGGATTTGAGTTTATGTTCTCTTATTTAGAAGTGGAATGACTCCAATGGTTGCCATATAACATATTCAAATTTTGACTCCCTGTTCTTCTGTTTGCCCCTTTAGCCTCAGTGTAAACAAGCTATTACTGGTTTGCAATAATTTCGACTCCACTTGTAATTGTGCTCGTTTTTTCACCATTTCGTTAT

Coding sequence (CDS)

ATGTTTATTTGCTTATTCCAGCGTGCAAAAGTTAAAACCACTACTCCCATTACACCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGAATGAAAGAGATGCTGGTTTGGCTGCACAACAAGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGATGACGCCGAGGCGTATGAAAAATATCAGCGAGAAGAACCTGAAGCTGACGATGAACAAAAGGCCAAGGATAATTCAACGGGTAGACCCACTTCCTCAACAAGTGCTGTGGATGATTCTGAGGATGTTCTCTTGGATGATGACGACGACGACGACGACGAACTAGATCTTGACGAGCTAAACGAGCTTGAGGCAAGTTTATCTAGAACGTCAATTCAGATCCGGGAGCCAGGTATTGAGCCCTCTTGA

Protein sequence

MFICLFQRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELNELEASLSRTSIQIREPGIEPS

Homology

[Close]

BLAST of CmaCh04G002610 vs. Swiss-Prot
Match: C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-37
Identity = 93/144 (64.58%), Postives = 113/144 (78.47%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           +RAK++T T +TP LF +WK+KK+ ERDAGLAA QAERAKNDRMSGRELFL+NASLFVDD
Sbjct: 227 ERAKLQTATQMTPALFMEWKRKKIAERDAGLAASQAERAKNDRMSGRELFLSNASLFVDD 286

Query: 67  AEAYEKYQREEPEADDEQKAKDN--STGRPTSSTSAVDDSEDV--LLDDDDDDDDELDLD 126
           AEA E+Y+RE  + + EQKAK+     G   SS  A   S++V    +DDDDDDD+LD+D
Sbjct: 287 AEACEEYEREREQEETEQKAKNKEAEAGTSKSSGDAEQSSKEVNEEEEDDDDDDDDLDMD 346

Query: 127 ELNELEASLSRTSIQIREPGIEPS 147
           EL+ELEASLS+TSIQIREP  E S
Sbjct: 347 ELDELEASLSKTSIQIREPNDEGS 370

[Close]

BLAST of CmaCh04G002610 vs. Swiss-Prot
Match: C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 5.1e-35
Identity = 87/139 (62.59%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QR KVKTTTP+T +LF +WK+KK  ER+AGLAA +AERAKNDRMSGRELF+A++S+FVDD
Sbjct: 227 QRKKVKTTTPMTTDLFMEWKRKKAEEREAGLAALRAERAKNDRMSGRELFMADSSVFVDD 286

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGRPTSSTS---AVDDSEDVLLDDDDDDDDELDLDE 126
           AEAY+ Y+R+E    +E+ +  N    P+SSTS    V++S+    D+D + DD+LD+DE
Sbjct: 287 AEAYDVYERQEESEANEEPSNKNQDEGPSSSTSNGKEVEESD----DEDINIDDDLDIDE 346

Query: 127 LNELEASLSRTSIQIREPG 143
           LNELEASLSRTSIQIREPG
Sbjct: 347 LNELEASLSRTSIQIREPG 361

[Close]

BLAST of CmaCh04G002610 vs. Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-07
Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAER-----AKNDRMSGRELFLANAS 66
           +RAK+  +TP+T E F +WK++K  +++      Q +R     A    MSGRE+F+ N  
Sbjct: 233 ERAKLTKSTPVTLETFLRWKEEKRLQKEKAAKDAQDKRLADIKAGKTSMSGREMFVFNPD 292

Query: 67  LFVDDAEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLLDDDDDDDDELDL 124
           LFVDD  A +   +E  ++++E  A  N       +   V  S+D   DDDDDDDDE   
Sbjct: 293 LFVDDESAIDTKSKEYEKSEEEIAALANQINTSLFTDGGVLPSDDDDDDDDDDDDDEDGD 352

[Close]

BLAST of CmaCh04G002610 vs. TrEMBL
Match: A0A0A0KQ23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175990 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.8e-54
Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           +RAKVKTTTPITPELFFQWKKKKM+ER+AGLAAQQAERAKNDRMSGRELFLANASLFVDD
Sbjct: 225 ERAKVKTTTPITPELFFQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDD 284

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELNE 126
           AEAYEKYQREE    DE KAKDNSTG P++ST+AVDDSED LL  D+DDDDELDLDELNE
Sbjct: 285 AEAYEKYQREEEPEADESKAKDNSTGGPSTSTNAVDDSEDDLL--DEDDDDELDLDELNE 344

Query: 127 LEASLSRTSIQIREPGIEPS 147
           LEA+LSRTSIQIREPGIE S
Sbjct: 345 LEATLSRTSIQIREPGIEAS 362

[Close]

BLAST of CmaCh04G002610 vs. TrEMBL
Match: A0A067FXF4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017965mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.3e-44
Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QR K+K+TTP+T ELF QWKKKKM ER+AGLAAQQAERAKNDRMSGRELFL+NASLFVDD
Sbjct: 224 QRGKLKSTTPMTTELFMQWKKKKMEERNAGLAAQQAERAKNDRMSGRELFLSNASLFVDD 283

Query: 67  AEAYEKYQREEPEADDEQKAKDNS-TGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELN 126
           AEA+E+Y REE    +EQK KD S T  P++S+ AV DSE++L   DDDDDDELDLDELN
Sbjct: 284 AEAFEEYHREEEAESNEQKGKDESATSGPSNSSGAVADSEEIL--PDDDDDDELDLDELN 343

Query: 127 ELEASLSRTSIQIREPGIEPS 147
           ELEASLSRTSIQI EPGIE S
Sbjct: 344 ELEASLSRTSIQICEPGIEAS 362

[Close]

BLAST of CmaCh04G002610 vs. TrEMBL
Match: V4TI73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031903mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.3e-44
Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QR K+K+TTP+T ELF QWKKKKM ER+AGLAAQQAERAKNDRMSGRELFL+NASLFVDD
Sbjct: 224 QRGKLKSTTPMTTELFMQWKKKKMEERNAGLAAQQAERAKNDRMSGRELFLSNASLFVDD 283

Query: 67  AEAYEKYQREEPEADDEQKAKDNS-TGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELN 126
           AEA+E+Y REE    +EQK KD S T  P++S+ AV DSE++L   DDDDDDELDLDELN
Sbjct: 284 AEAFEEYHREEEAESNEQKGKDESATSGPSNSSGAVADSEEIL--PDDDDDDELDLDELN 343

Query: 127 ELEASLSRTSIQIREPGIEPS 147
           ELEASLSRTSIQI EPGIE S
Sbjct: 344 ELEASLSRTSIQICEPGIEAS 362

[Close]

BLAST of CmaCh04G002610 vs. TrEMBL
Match: W9RFQ8_9ROSA (Zinc finger CCCH domain-containing protein 11 OS=Morus notabilis GN=L484_017234 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 103/140 (73.57%), Postives = 121/140 (86.43%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QRAKVKTTTP+TP+LFFQWKKKK+ ERDAGLAAQQAERAKNDRMSGRELFL++ASLFVDD
Sbjct: 329 QRAKVKTTTPMTPDLFFQWKKKKIEERDAGLAAQQAERAKNDRMSGRELFLSDASLFVDD 388

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELNE 126
            EAYEKY R+EP+  +E+ +   + G P++S+ A  DSE+V   D DDD+DELD+DELNE
Sbjct: 389 VEAYEKYTRQEPQHAEEKVSGSMAAGGPSTSSGAAADSEEV--SDVDDDEDELDMDELNE 448

Query: 127 LEASLSRTSIQIREPGIEPS 147
           LEASLS+TSIQIREPGIE S
Sbjct: 449 LEASLSKTSIQIREPGIEAS 466

[Close]

BLAST of CmaCh04G002610 vs. TrEMBL
Match: M5X9Q0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007639mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.6e-43
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QRAKV T TP+T +LF QW+KKK  E++AGLA Q+AERAKNDRMSGRELFLA+AS+FVDD
Sbjct: 222 QRAKVTTCTPMTTDLFMQWRKKKTEEKEAGLAVQRAERAKNDRMSGRELFLADASVFVDD 281

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLL-DDDDDDDDELDLDELN 126
           AEAYEKYQR+EPEA  E+K KDNS     S++++V  SE+V + DDDDDDDDELDLDELN
Sbjct: 282 AEAYEKYQRQEPEA-AEEKVKDNSAAAGPSASTSVAGSEEVPIDDDDDDDDDELDLDELN 341

Query: 127 ELEASLSRTSIQIREPGIEPS 147
           ELEASLSRTSIQIREPGIE S
Sbjct: 342 ELEASLSRTSIQIREPGIEAS 361

[Close]

BLAST of CmaCh04G002610 vs. TAIR10
Match: AT2G20280.1 (AT2G20280.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-38
Identity = 93/144 (64.58%), Postives = 113/144 (78.47%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           +RAK++T T +TP LF +WK+KK+ ERDAGLAA QAERAKNDRMSGRELFL+NASLFVDD
Sbjct: 227 ERAKLQTATQMTPALFMEWKRKKIAERDAGLAASQAERAKNDRMSGRELFLSNASLFVDD 286

Query: 67  AEAYEKYQREEPEADDEQKAKDN--STGRPTSSTSAVDDSEDV--LLDDDDDDDDELDLD 126
           AEA E+Y+RE  + + EQKAK+     G   SS  A   S++V    +DDDDDDD+LD+D
Sbjct: 287 AEACEEYEREREQEETEQKAKNKEAEAGTSKSSGDAEQSSKEVNEEEEDDDDDDDDLDMD 346

Query: 127 ELNELEASLSRTSIQIREPGIEPS 147
           EL+ELEASLS+TSIQIREP  E S
Sbjct: 347 ELDELEASLSKTSIQIREPNDEGS 370

[Close]

BLAST of CmaCh04G002610 vs. NCBI nr
Match: gi|659090100|ref|XP_008445838.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54
Identity = 123/140 (87.86%), Postives = 131/140 (93.57%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           +RAKVKTTTPITPELFFQWKKKKM+ER+AGLAAQQAERAKNDRMSGRELFLANASLFVDD
Sbjct: 225 ERAKVKTTTPITPELFFQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDD 284

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELNE 126
           AEAYEKYQREE    DE KAKDNSTG P++ST+AVDDSEDVLL  D+DDDDELDLDELNE
Sbjct: 285 AEAYEKYQREEEPEADESKAKDNSTGGPSTSTNAVDDSEDVLL--DEDDDDELDLDELNE 344

Query: 127 LEASLSRTSIQIREPGIEPS 147
           LEA+LSRTSIQIREPGIE S
Sbjct: 345 LEATLSRTSIQIREPGIEAS 362

[Close]

BLAST of CmaCh04G002610 vs. NCBI nr
Match: gi|449451709|ref|XP_004143604.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 8.3e-54
Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           +RAKVKTTTPITPELFFQWKKKKM+ER+AGLAAQQAERAKNDRMSGRELFLANASLFVDD
Sbjct: 225 ERAKVKTTTPITPELFFQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDD 284

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELNE 126
           AEAYEKYQREE    DE KAKDNSTG P++ST+AVDDSED LL  D+DDDDELDLDELNE
Sbjct: 285 AEAYEKYQREEEPEADESKAKDNSTGGPSTSTNAVDDSEDDLL--DEDDDDELDLDELNE 344

Query: 127 LEASLSRTSIQIREPGIEPS 147
           LEA+LSRTSIQIREPGIE S
Sbjct: 345 LEATLSRTSIQIREPGIEAS 362

[Close]

BLAST of CmaCh04G002610 vs. NCBI nr
Match: gi|1009120805|ref|XP_015877122.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-44
Identity = 111/141 (78.72%), Postives = 123/141 (87.23%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QRAKV TTTP+TPELF QWKKKKM ERDAGLAAQ+AERAKNDRMSGRELFL++ASLFVDD
Sbjct: 226 QRAKVTTTTPMTPELFLQWKKKKMEERDAGLAAQRAERAKNDRMSGRELFLSDASLFVDD 285

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGR-PTSSTSAVDDSEDVLLDDDDDDDDELDLDELN 126
           AEAYEKY REEPE   E+KA+DN+    P++S+SAV  SE+    DDDDDDDELD+DELN
Sbjct: 286 AEAYEKYLREEPEVA-ERKAQDNTAVEGPSASSSAVAGSEEAP-PDDDDDDDELDMDELN 345

Query: 127 ELEASLSRTSIQIREPGIEPS 147
           ELEASLSRTSIQIREPGIE S
Sbjct: 346 ELEASLSRTSIQIREPGIEAS 364

[Close]

BLAST of CmaCh04G002610 vs. NCBI nr
Match: gi|1009120809|ref|XP_015877124.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-44
Identity = 111/141 (78.72%), Postives = 123/141 (87.23%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QRAKV TTTP+TPELF QWKKKKM ERDAGLAAQ+AERAKNDRMSGRELFL++ASLFVDD
Sbjct: 225 QRAKVTTTTPMTPELFLQWKKKKMEERDAGLAAQRAERAKNDRMSGRELFLSDASLFVDD 284

Query: 67  AEAYEKYQREEPEADDEQKAKDNSTGR-PTSSTSAVDDSEDVLLDDDDDDDDELDLDELN 126
           AEAYEKY REEPE   E+KA+DN+    P++S+SAV  SE+    DDDDDDDELD+DELN
Sbjct: 285 AEAYEKYLREEPEVA-ERKAQDNTAVEGPSASSSAVAGSEEAP-PDDDDDDDELDMDELN 344

Query: 127 ELEASLSRTSIQIREPGIEPS 147
           ELEASLSRTSIQIREPGIE S
Sbjct: 345 ELEASLSRTSIQIREPGIEAS 363

[Close]

BLAST of CmaCh04G002610 vs. NCBI nr
Match: gi|567887338|ref|XP_006436191.1| (hypothetical protein CICLE_v10031903mg [Citrus clementina])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 1


Query: 7   QRAKVKTTTPITPELFFQWKKKKMNERDAGLAAQQAERAKNDRMSGRELFLANASLFVDD 66
           QR K+K+TTP+T ELF QWKKKKM ER+AGLAAQQAERAKNDRMSGRELFL+NASLFVDD
Sbjct: 224 QRGKLKSTTPMTTELFMQWKKKKMEERNAGLAAQQAERAKNDRMSGRELFLSNASLFVDD 283

Query: 67  AEAYEKYQREEPEADDEQKAKDNS-TGRPTSSTSAVDDSEDVLLDDDDDDDDELDLDELN 126
           AEA+E+Y REE    +EQK KD S T  P++S+ AV DSE++L   DDDDDDELDLDELN
Sbjct: 284 AEAFEEYHREEEAESNEQKGKDESATSGPSNSSGAVADSEEIL--PDDDDDDELDLDELN 343

Query: 127 ELEASLSRTSIQIREPGIEPS 147
           ELEASLSRTSIQI EPGIE S
Sbjct: 344 ELEASLSRTSIQICEPGIEAS 362

The following BLAST results are available for this feature:

BLAST of CmaCh04G002610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H21_ARATH	5.4e-37	64.58	Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g202...	[more]
C3H11_ORYSJ	5.1e-35	62.59	Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN...	[more]
ZC3HF_DICDI	2.0e-07	36.89	Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideu...	[more]

BLAST of CmaCh04G002610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ23_CUCSA	5.8e-54	87.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175990 PE=4 SV=1	[more]
A0A067FXF4_CITSI	9.3e-44	75.89	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017965mg PE=4 SV=1	[more]
V4TI73_9ROSI	9.3e-44	75.89	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031903mg PE=4 SV=1	[more]
W9RFQ8_9ROSA	1.2e-43	73.57	Zinc finger CCCH domain-containing protein 11 OS=Morus notabilis GN=L484_017234 ...	[more]
M5X9Q0_PRUPE	4.6e-43	74.47	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007639mg PE=4 SV=1	[more]

BLAST of CmaCh04G002610 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20280.1	3.0e-38	64.58	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of CmaCh04G002610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090100\|ref\|XP_008445838.1\|	1.3e-54	87.86	PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis melo]	[more]
gi\|449451709\|ref\|XP_004143604.1\|	8.3e-54	87.14	PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis sativus]	[more]
gi\|1009120805\|ref\|XP_015877122.1\|	2.1e-44	78.72	PREDICTED: zinc finger CCCH domain-containing protein 11 isoform X1 [Ziziphus ju...	[more]
gi\|1009120809\|ref\|XP_015877124.1\|	2.1e-44	78.72	PREDICTED: zinc finger CCCH domain-containing protein 11 isoform X2 [Ziziphus ju...	[more]
gi\|567887338\|ref\|XP_006436191.1\|	1.3e-43	75.89	hypothetical protein CICLE_v10031903mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G002610.1	CmaCh04G002610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12681	ZINC FINGER-CONTAINING PROTEIN P48ZNF	coord: 7..146 score: 1.2
None	No IPR available	PANTHER	PTHR12681:SF4	SUBFAMILY NOT NAMED	coord: 7..146 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G002610	Cucumber (Gy14) v2	cgybcmaB411
CmaCh04G002610	Cucumber (Gy14) v2	cgybcmaB548
CmaCh04G002610	Cucumber (Gy14) v2	cgybcmaB674
CmaCh04G002610	Melon (DHL92) v3.6.1	cmamedB738
CmaCh04G002610	Melon (DHL92) v3.6.1	cmamedB770
CmaCh04G002610	Silver-seed gourd	carcmaB0427
CmaCh04G002610	Silver-seed gourd	carcmaB0215
CmaCh04G002610	Silver-seed gourd	carcmaB1171
CmaCh04G002610	Cucumber (Chinese Long) v3	cmacucB0883
CmaCh04G002610	Cucumber (Chinese Long) v3	cmacucB0830
CmaCh04G002610	Cucumber (Chinese Long) v3	cmacucB0850
CmaCh04G002610	Cucumber (Chinese Long) v3	cmacucB0892
CmaCh04G002610	Cucumber (Chinese Long) v3	cmacucB0915
CmaCh04G002610	Watermelon (97103) v2	cmawmbB720
CmaCh04G002610	Watermelon (97103) v2	cmawmbB741
CmaCh04G002610	Watermelon (97103) v2	cmawmbB743
CmaCh04G002610	Watermelon (97103) v2	cmawmbB751
CmaCh04G002610	Wax gourd	cmawgoB0824
CmaCh04G002610	Wax gourd	cmawgoB0880
CmaCh04G002610	Wax gourd	cmawgoB0894
CmaCh04G002610	Cucurbita maxima (Rimu)	cmacmaB234
CmaCh04G002610	Cucurbita maxima (Rimu)	cmacmaB319
CmaCh04G002610	Cucurbita maxima (Rimu)	cmacmaB486
CmaCh04G002610	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G002610	Cucumber (Gy14) v1	cgycmaB0471
CmaCh04G002610	Cucumber (Gy14) v1	cgycmaB0845
CmaCh04G002610	Cucurbita moschata (Rifu)	cmacmoB719
CmaCh04G002610	Cucurbita moschata (Rifu)	cmacmoB722
CmaCh04G002610	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G002610	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G002610	Wild cucumber (PI 183967)	cmacpiB757
CmaCh04G002610	Wild cucumber (PI 183967)	cmacpiB763
CmaCh04G002610	Cucumber (Chinese Long) v2	cmacuB701
CmaCh04G002610	Cucumber (Chinese Long) v2	cmacuB747
CmaCh04G002610	Cucumber (Chinese Long) v2	cmacuB754
CmaCh04G002610	Melon (DHL92) v3.5.1	cmameB631
CmaCh04G002610	Melon (DHL92) v3.5.1	cmameB654
CmaCh04G002610	Watermelon (Charleston Gray)	cmawcgB642
CmaCh04G002610	Watermelon (97103) v1	cmawmB650
CmaCh04G002610	Watermelon (97103) v1	cmawmB724
CmaCh04G002610	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G002610	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G002610	Cucurbita pepo (Zucchini)	cmacpeB751
CmaCh04G002610	Bottle gourd (USVL1VR-Ls)	cmalsiB630
CmaCh04G002610	Bottle gourd (USVL1VR-Ls)	cmalsiB646
CmaCh04G002610	Bottle gourd (USVL1VR-Ls)	cmalsiB661
CmaCh04G002610	Bottle gourd (USVL1VR-Ls)	cmalsiB677