CmaCh04G001170 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G001170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionARM repeat superfamily protein
LocationCma_Chr04 : 566149 .. 569426 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGAGTCATTTCATACTTCGCCCCAAAACTCAAAGCCATAAATTTGTTTTGCGGCGGAGCGGGTTGCAGTTCACAAACGGAGTCGACCCACACTGCCGGAGCCGGCGGCTGATTCTGCACCATGCGCATAATTGTATCGAAGCTAACCGCCGTAAAATTCTCCTCTCTCTCTCTCTCGAGCTTTCTGTTTTCAGAAATTTCCTCCATGGTTTTTCCCCTTACTTGCATTAGTTTCAGCATCTCTGCAGAAGGGAACCTGCGCGGACCCTGCAATTTCGCCCTTTTTCAGCTTACGACGAACGTGGTAAATCTTGTTTGAAATTATCGATCTCTTTTTTTGTTTGCTGAAGGGACGGATTGTTTTGGCTGCTCAGATGATGCATATAAAATGGAATTTAAGGGTTTATTTTTTCGTTTGATGCCTATTCGATGGCTATCGTTGCCTTTTTCTGTTTGGATATTGGAATCCGGTTGCTTGTATCGAAAAGAAATTAATCCCATAGTGCTCTAAGCCGGGATTAAAGCATTATTGACGGGAATGCTAGTCCCTTAATTTTATGGATGTTGACATAAATAAGCTGTCAATCTTATTGTTTATCTTTCTTTTTCTTTTTTCATCGATATTTGTATAGTATGTTAGCAATATTGGTTGATCTCTAATACCAATTGCTGAACCTTTGATTATTGATAGTATCAATGGGAATATTATTATGTTGATGGATATTCTATTACTTGGTTCTAACAACGAAGTAGGGGACAGTACGCTTTTAGTCTTATTTTCATATGTTCATTTATCTGTGGCCTTTGTTTTACTCTTTGATCCAAAAGGAATGTTTGCAATCTGTAAAAGTAAATAGATGAGTTCCATACTTACTGACATTGTTGTTGAATGCCTGATTGAAATTGAGTTAATTTCAGAGATCGAGAAGGAGGCTGAAAGAAAAGTAGGATGGCTATTAAAACTAATCTTTGCTGGGACTGCCACATTTCTGGGTTACCACATTTTTCCGTACATGGGTCAGAAAATTATATCTCTAAGTTACTTTTGATTTCTTTGGATGTTAAATGTTTGTAGTTTTCAATCCTTTCAGGGTGTAATCTTGAGTTAAATTTGTTCTTACAGGGGATAACTTGTTGCAGCAATCTGTTTCCCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCGAGATTAGCTCGCTTTTCAATTGATGGTATCTCCTCACCTTTTCCCCTCCTGAATTGTTTAAGGCTTTTAACTATCGATGGTAAAACTTGTCTCAAACTCTGCCCTTACTTACAGGATTTGTTCTATAGATTGCGTAACTGTGAGTTCTAGATACTTGTTCCGAACTTTTCTATCGTGTTGAAACTTTGTCGTGGGGCATATAATCCCTTGCCTGCTGTCTTGCTGCAGTAAATCTTGTTAGCCCATCACATTTTTTCTCACCAGGATTCTAAGAAATTGTTTTAAGACCTCTTATTGAGATTCTGTAATCATGATACCAACGTAAATACATATACTAATAGCTAAAGAAGGCTTTCGAATTTATCATAAAGCTCCTTTGCTCTGCTAACTTAGAAAAATGTTAGCAAGCTAAATTGCTGGGTCAGAAACTTCCAGCTGCATTGGCCAATAAAAGAAGCATCTTTCAAGAAAGGATTTTAGATTTGCACTCTTTCTACCTCAGCAACCTCACTCATAATTGAAAAAAACTCAAGCCCACTACTAGCAAATATTGTCCTCTTTGAGCTTTCCTTTTTGAGTTTCCCCTCAAGGTTTTTAGAACGCGGGTGCTAGGGTGAGGTTTCCACACCTTTATAAAAAAATGTTTCGTTCTTCTCCCCCCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGGGGCCCAACATCCTTTTTGGCACTCGTTCCCTTCTCTAATCAATGTGGGACCCCCCAAATCCACCCCCTTCAGGGACTAGCATCCTTGCTGGCACACTGCCCCGTGTCCACCCTCCGGTCGTCCGATGTCTGGCTCTGATATCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTAGGTTTTCCCTTCCGGACTTCCCCTCAAAGTTTTTAAAACACATGTGCTATAGAGAGGTTTTCACACTCTTATAAAGAATGCTTCGTTCTCTTCCCCAACCAATATAGGATCTCACAAAAAACATTTTGTATCTTTTGAATCGGTAAATGTTAAGAGTTGTGACAGTCTTGTCTCTAGTATTGACTGATTGCACTTTTGTTGGTAACTTCAAAAACTCAGGGCAAGCCTGTTGAATTTATTGCTGAAATCTGACTATTACATTTTTCTTTCTTTGCAACTACAGATGAAAAAAGGATGAAAATAGTGGAGATAGGTGGGGCTCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGACGACCGTACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCATATTCAGGTTCAAATTCTAATTTCCACAGATACTTCTTTAATTTATTATCTACGCTTTAGCTTTAGTTTTGATCTTATTAACCTAGGAGTTGGTGCATAAACATGCAACACATCTGGATTTCTGGTGTTCTGTAGAACGTTACGTCCTGATCTTGAAACCACACAATGATTTAGAGCTTCCTTGTATGTCTAGAAACTGCGACAATATAGGTGGTTCTACATCCATTTTGAAACGCTCGTTTTTCATATTTAATTTTCCAGATGAAGCTGTTGGTGCTTTGCATAAAGCAGGGGCGATCTTGGTTATTAAATCGACCCCGGATTCAGCTGAAGATACGCAAGTAAACGAGTACAAGTCAAACCTAATGAAGAGATTTAGAGATCTTAGCTATGATGTTTCATCTTGAAGGAGATGGGCTGTCTTACATTTGCGAGATCGGTTGTTTCCACTCAAAATACTTTAACCATGTTAGAGATGTTGGGAAGGATTGAGATGTTGAGACCAGTTTTGTTATGCTTTTTAAGATTAAAATCAAGGCTTCTTCCTTACAGAGAATGTATAGTAGAGCCAACCCATCAGAGCCAGTACCATTGCTCTGATGACAAAATGAGCGAACCCATAAAGACCAATTATTGAACAAATTTCTCAAATTTACAATTTTTTTTAAATATCGAGTATCGTGTTCTCTCAACTCCCATTGTTGTTCTTAGCATATCGAATAAAATTTTAAGGATGTTATGAACCTTGTTAAGTGTTGTAATTACACTATTGAACTTCTAATCAATCAGCTC

mRNA sequence

AATTGAGTCATTTCATACTTCGCCCCAAAACTCAAAGCCATAAATTTGTTTTGCGGCGGAGCGGGTTGCAGTTCACAAACGGAGTCGACCCACACTGCCGGAGCCGGCGGCTGATTCTGCACCATGCGCATAATTGTATCGAAGCTAACCGCCCATCTCTGCAGAAGGGAACCTGCGCGGACCCTGCAATTTCGCCCTTTTTCAGCTTACGACGAACGTGAGATCGAGAAGGAGGCTGAAAGAAAAGTAGGATGGCTATTAAAACTAATCTTTGCTGGGACTGCCACATTTCTGGGTTACCACATTTTTCCGTACATGGGGGATAACTTGTTGCAGCAATCTGTTTCCCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCGAGATTAGCTCGCTTTTCAATTGATGATGAAAAAAGGATGAAAATAGTGGAGATAGGTGGGGCTCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGACGACCGTACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCATATTCAGATGAAGCTGTTGGTGCTTTGCATAAAGCAGGGGCGATCTTGGTTATTAAATCGACCCCGGATTCAGCTGAAGATACGCAAGTAAACGAGTACAAGTCAAACCTAATGAAGAGATTTAGAGATCTTAGCTATGATGTTTCATCTTGAAGGAGATGGGCTGTCTTACATTTGCGAGATCGGTTGTTTCCACTCAAAATACTTTAACCATGTTAGAGATGTTGGGAAGGATTGAGATGTTGAGACCAGTTTTGTTATGCTTTTTAAGATTAAAATCAAGGCTTCTTCCTTACAGAGAATGTATAGTAGAGCCAACCCATCAGAGCCAGTACCATTGCTCTGATGACAAAATGAGCGAACCCATAAAGACCAATTATTGAACAAATTTCTCAAATTTACAATTTTTTTTAAATATCGAGTATCGTGTTCTCTCAACTCCCATTGTTGTTCTTAGCATATCGAATAAAATTTTAAGGATGTTATGAACCTTGTTAAGTGTTGTAATTACACTATTGAACTTCTAATCAATCAGCTC

Coding sequence (CDS)

ATGCGCATAATTGTATCGAAGCTAACCGCCCATCTCTGCAGAAGGGAACCTGCGCGGACCCTGCAATTTCGCCCTTTTTCAGCTTACGACGAACGTGAGATCGAGAAGGAGGCTGAAAGAAAAGTAGGATGGCTATTAAAACTAATCTTTGCTGGGACTGCCACATTTCTGGGTTACCACATTTTTCCGTACATGGGGGATAACTTGTTGCAGCAATCTGTTTCCCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCGAGATTAGCTCGCTTTTCAATTGATGATGAAAAAAGGATGAAAATAGTGGAGATAGGTGGGGCTCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGACGACCGTACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCATATTCAGATGAAGCTGTTGGTGCTTTGCATAAAGCAGGGGCGATCTTGGTTATTAAATCGACCCCGGATTCAGCTGAAGATACGCAAGTAAACGAGTACAAGTCAAACCTAATGAAGAGATTTAGAGATCTTAGCTATGATGTTTCATCTTGA

Protein sequence

MRIIVSKLTAHLCRREPARTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKRFRDLSYDVSS
Homology
[Close]
BLAST of CmaCh04G001170 vs. TrEMBL
Match: A0A0A0KM85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218790 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 3.1e-92
Identity = 177/188 (94.15%), Postives = 180/188 (95.74%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPARTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYH 60
           MRII SKLT HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLGY 
Sbjct: 1   MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQ 60

Query: 61  IFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA 120
           IFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA
Sbjct: 61  IFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA 120

Query: 121 AKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKRFR 180
           AKDDRTRKEALKALHAIS+SDEA GALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFR
Sbjct: 121 AKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFR 180

Query: 181 DLSYDVSS 189
           DL YDVSS
Sbjct: 181 DLRYDVSS 188

[Close]
BLAST of CmaCh04G001170 vs. TrEMBL
Match: F6HC93_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02240 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-69
Identity = 137/190 (72.11%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPA--RTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60
           MR I S+LT +LCRR+P   R+  F  ++  DER +E++AERKVGWLLKLIFAGTAT + 
Sbjct: 30  MRTIASQLT-YLCRRKPGNVRSRNFSSYNGKDERSLEEDAERKVGWLLKLIFAGTATAVA 89

Query: 61  YHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML 120
           Y  FPY+GDNLLQQSVSLL VKDPLFKRMGASRLARF+IDDE+RMKIVE+GGAQEL+NML
Sbjct: 90  YQFFPYLGDNLLQQSVSLLHVKDPLFKRMGASRLARFAIDDERRMKIVEMGGAQELINML 149

Query: 121 GAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKR 180
           GAAKDDRTRKEALKAL A+S+S+EAVGALH AGAI V+KSTPDS E  ++ +YK NL+KR
Sbjct: 150 GAAKDDRTRKEALKALAALSHSEEAVGALHHAGAISVVKSTPDSTECAEIEKYKVNLLKR 209

Query: 181 FRDLSYDVSS 189
           F+DL YD+ S
Sbjct: 210 FQDLRYDIPS 218

[Close]
BLAST of CmaCh04G001170 vs. TrEMBL
Match: V4T789_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032836mg PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.3e-69
Identity = 136/191 (71.20%), Postives = 163/191 (85.34%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPARTLQFRPFSAY---DEREIEKEAERKVGWLLKLIFAGTATFL 60
           MR + S+LT ++CR   A  +QFR FS+Y   D+  +E++AERK+GWLLKL+FAGTA  +
Sbjct: 1   MRTLASQLTTYVCRGR-AGNVQFRNFSSYNGKDDLALEQDAERKIGWLLKLLFAGTAAAV 60

Query: 61  GYHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNM 120
           GY  FPYMGDNL+QQSVSLL+VKDPLFKRMGASRL RF+IDDE+RMKIVEIGGAQEL+NM
Sbjct: 61  GYQFFPYMGDNLMQQSVSLLKVKDPLFKRMGASRLTRFAIDDERRMKIVEIGGAQELVNM 120

Query: 121 LGAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMK 180
           LGAAKDDRTRKEALKAL A+S+SDEA GALH AGAI VIKSTPDS +D +V +YKS+L+K
Sbjct: 121 LGAAKDDRTRKEALKALAALSHSDEAAGALHHAGAISVIKSTPDSLDDAEVEKYKSSLLK 180

Query: 181 RFRDLSYDVSS 189
           RF+DL YD+ S
Sbjct: 181 RFQDLRYDIPS 190

[Close]
BLAST of CmaCh04G001170 vs. TrEMBL
Match: M5XKS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011690mg PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-67
Identity = 134/191 (70.16%), Postives = 159/191 (83.25%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPARTLQFRPFSAY---DEREIEKEAERKVGWLLKLIFAGTATFL 60
           MR + ++LT + CRR P R  Q R FS Y   DE  +E++AERK+GWLLKLIFAGTAT +
Sbjct: 1   MRTLAARLTTYYCRRNPVRNSQPRNFSTYNGRDELSLEQDAERKIGWLLKLIFAGTATCI 60

Query: 61  GYHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNM 120
            Y+I PYMGDNLLQQSVSLL VKDPLFKRMGASRLA+F+IDDE+RMKIVE+GGAQEL+NM
Sbjct: 61  AYNIMPYMGDNLLQQSVSLLTVKDPLFKRMGASRLAQFAIDDERRMKIVEMGGAQELVNM 120

Query: 121 LGAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMK 180
           L  AKDDRTRKEALKAL A+S SD+A+GALH+AGAI VI+STPDS E  ++ +YKS L+K
Sbjct: 121 LVDAKDDRTRKEALKALSALSPSDQAIGALHQAGAISVIRSTPDSLESAEIEKYKSGLLK 180

Query: 181 RFRDLSYDVSS 189
           RF+DL YDV S
Sbjct: 181 RFQDLRYDVPS 191

[Close]
BLAST of CmaCh04G001170 vs. TrEMBL
Match: A0A061FLT1_THECC (ARM repeat superfamily protein OS=Theobroma cacao GN=TCM_042405 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-66
Identity = 135/191 (70.68%), Postives = 160/191 (83.77%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPARTLQFRPFSAY---DEREIEKEAERKVGWLLKLIFAGTATFL 60
           MR + ++L   L +R+P   +Q R FS+Y   DE  +E+EAERK+GWLLKLIFAGTA+F+
Sbjct: 1   MRALAAQLNTFLFKRKPWN-VQSRNFSSYNGKDEAYLEQEAERKIGWLLKLIFAGTASFV 60

Query: 61  GYHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNM 120
            Y  FPYMGDNL+ QSVSLL VKDPLFKRMGASRLARF+IDDE+RMKIVEIGGAQELLNM
Sbjct: 61  AYQFFPYMGDNLMHQSVSLLHVKDPLFKRMGASRLARFAIDDERRMKIVEIGGAQELLNM 120

Query: 121 LGAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMK 180
           LG+AKD+RT KEALKAL A+S SD+AVGALH AGAI VIKSTPD+ ED ++  YKSNL+K
Sbjct: 121 LGSAKDERTLKEALKALSALSKSDQAVGALHHAGAISVIKSTPDTFEDIEIGIYKSNLLK 180

Query: 181 RFRDLSYDVSS 189
           RF+DL YD+SS
Sbjct: 181 RFQDLRYDISS 190

[Close]
BLAST of CmaCh04G001170 vs. TAIR10
Match: AT3G56210.5 (AT3G56210.5 ARM repeat superfamily protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-57
Identity = 110/192 (57.29%), Postives = 148/192 (77.08%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPA--RTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60
           MRI+ +++  H CR   A  R+  F   +  D+  +E+EAERK+GW LK+ FAGTAT++G
Sbjct: 1   MRILTARIANHFCRARNANPRSRNFSSSNKKDDLTLEEEAERKIGWCLKIFFAGTATYIG 60

Query: 61  YHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML 120
           Y  FPY+GDNL+ QS+SLL VKDPLFKRMGASRL+RF+IDDE+RMK+VE+GGAQELL+ML
Sbjct: 61  YQFFPYLGDNLIHQSISLLHVKDPLFKRMGASRLSRFAIDDERRMKVVEMGGAQELLHML 120

Query: 121 GAAKDDRTRKEALKALHAISYS--DEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLM 180
           G+AKDD+TRKEALKAL A+S S   EA   L   GA+ ++KSTP+S ED+ ++ YKSN++
Sbjct: 121 GSAKDDKTRKEALKALAALSKSVAGEAAKFLGSNGALSIVKSTPNSLEDSDISTYKSNIL 180

Query: 181 KRFRDLSYDVSS 189
           ++  + +  VSS
Sbjct: 181 EKLVEKNLAVSS 192

[Close]
BLAST of CmaCh04G001170 vs. NCBI nr
Match: gi|778701461|ref|XP_011655026.1| (PREDICTED: uncharacterized protein LOC101212969 isoform X2 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 4.4e-92
Identity = 177/188 (94.15%), Postives = 180/188 (95.74%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPARTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYH 60
           MRII SKLT HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLGY 
Sbjct: 1   MRIIASKLTTHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQ 60

Query: 61  IFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA 120
           IFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA
Sbjct: 61  IFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA 120

Query: 121 AKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKRFR 180
           AKDDRTRKEALKALHAIS+SDEA GALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFR
Sbjct: 121 AKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFR 180

Query: 181 DLSYDVSS 189
           DL YDVSS
Sbjct: 181 DLRYDVSS 188

[Close]
BLAST of CmaCh04G001170 vs. NCBI nr
Match: gi|449457429|ref|XP_004146451.1| (PREDICTED: uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.4e-90
Identity = 177/190 (93.16%), Postives = 180/190 (94.74%), Query Frame = 1 

Query: 1   MRIIVSKLTA--HLCRREPARTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60
           MRII SKLT   HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLG
Sbjct: 1   MRIIASKLTTFQHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60

Query: 61  YHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML 120
           Y IFPYMGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML
Sbjct: 61  YQIFPYMGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML 120

Query: 121 GAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKR 180
           GAAKDDRTRKEALKALHAIS+SDEA GALHKAGAILVIKSTPDSAED +VNEYKSNLMKR
Sbjct: 121 GAAKDDRTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKR 180

Query: 181 FRDLSYDVSS 189
           FRDL YDVSS
Sbjct: 181 FRDLRYDVSS 190

[Close]
BLAST of CmaCh04G001170 vs. NCBI nr
Match: gi|659114110|ref|XP_008456907.1| (PREDICTED: uncharacterized protein LOC103496719 isoform X2 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-88
Identity = 171/188 (90.96%), Postives = 178/188 (94.68%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPARTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYH 60
           MRII SKLTAHLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLGY 
Sbjct: 1   MRIIASKLTAHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLGYQ 60

Query: 61  IFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGA 120
           IFPYMGDNLLQQSV+LL+VKDPLFKRMGASRLARFSIDD++RMKIVE GGAQELLNML  
Sbjct: 61  IFPYMGDNLLQQSVTLLRVKDPLFKRMGASRLARFSIDDKRRMKIVEFGGAQELLNMLEV 120

Query: 121 AKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKRFR 180
           AKDDRTRKEALKAL+AIS+SDEAVG LHKAGAILVIKSTPDSAED +VNEYKSNLMKRFR
Sbjct: 121 AKDDRTRKEALKALYAISHSDEAVGYLHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFR 180

Query: 181 DLSYDVSS 189
           DL YDVSS
Sbjct: 181 DLRYDVSS 188

[Close]
BLAST of CmaCh04G001170 vs. NCBI nr
Match: gi|659114108|ref|XP_008456906.1| (PREDICTED: uncharacterized protein LOC103496719 isoform X1 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 4.3e-87
Identity = 171/190 (90.00%), Postives = 178/190 (93.68%), Query Frame = 1 

Query: 1   MRIIVSKLTA--HLCRREPARTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60
           MRII SKLTA  HLCRREP RTLQFR FSAYDEREIEKEAERKVGWLLKLIFAGTATFLG
Sbjct: 1   MRIIASKLTAFQHLCRREPVRTLQFRTFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60

Query: 61  YHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML 120
           Y IFPYMGDNLLQQSV+LL+VKDPLFKRMGASRLARFSIDD++RMKIVE GGAQELLNML
Sbjct: 61  YQIFPYMGDNLLQQSVTLLRVKDPLFKRMGASRLARFSIDDKRRMKIVEFGGAQELLNML 120

Query: 121 GAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKR 180
             AKDDRTRKEALKAL+AIS+SDEAVG LHKAGAILVIKSTPDSAED +VNEYKSNLMKR
Sbjct: 121 EVAKDDRTRKEALKALYAISHSDEAVGYLHKAGAILVIKSTPDSAEDMKVNEYKSNLMKR 180

Query: 181 FRDLSYDVSS 189
           FRDL YDVSS
Sbjct: 181 FRDLRYDVSS 190

[Close]
BLAST of CmaCh04G001170 vs. NCBI nr
Match: gi|297736530|emb|CBI25401.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 268.9 bits (686), Expect = 6.9e-69
Identity = 137/190 (72.11%), Postives = 162/190 (85.26%), Query Frame = 1 

Query: 1   MRIIVSKLTAHLCRREPA--RTLQFRPFSAYDEREIEKEAERKVGWLLKLIFAGTATFLG 60
           MR I S+LT +LCRR+P   R+  F  ++  DER +E++AERKVGWLLKLIFAGTAT + 
Sbjct: 1   MRTIASQLT-YLCRRKPGNVRSRNFSSYNGKDERSLEEDAERKVGWLLKLIFAGTATAVA 60

Query: 61  YHIFPYMGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNML 120
           Y  FPY+GDNLLQQSVSLL VKDPLFKRMGASRLARF+IDDE+RMKIVE+GGAQEL+NML
Sbjct: 61  YQFFPYLGDNLLQQSVSLLHVKDPLFKRMGASRLARFAIDDERRMKIVEMGGAQELINML 120

Query: 121 GAAKDDRTRKEALKALHAISYSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKR 180
           GAAKDDRTRKEALKAL A+S+S+EAVGALH AGAI V+KSTPDS E  ++ +YK NL+KR
Sbjct: 121 GAAKDDRTRKEALKALAALSHSEEAVGALHHAGAISVVKSTPDSTECAEIEKYKVNLLKR 180

Query: 181 FRDLSYDVSS 189
           F+DL YD+ S
Sbjct: 181 FQDLRYDIPS 189

The following BLAST results are available for this feature:
BLAST of CmaCh04G001170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G001170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM85_CUCSA3.1e-9294.15Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218790 PE=4 SV=1[more]
F6HC93_VITVI4.8e-6972.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02240 PE=4 SV=... [more]
V4T789_9ROSI6.3e-6971.20Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032836mg PE=4 SV=1[more]
M5XKS5_PRUPE1.2e-6770.16Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011690mg PE=4 SV=1[more]
A0A061FLT1_THECC1.7e-6670.68ARM repeat superfamily protein OS=Theobroma cacao GN=TCM_042405 PE=4 SV=1[more]
BLAST of CmaCh04G001170 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56210.51.3e-5757.29 ARM repeat superfamily protein[more]
BLAST of CmaCh04G001170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778701461|ref|XP_011655026.1|4.4e-9294.15PREDICTED: uncharacterized protein LOC101212969 isoform X2 [Cucumis sativus][more]
gi|449457429|ref|XP_004146451.1|1.4e-9093.16PREDICTED: uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus][more]
gi|659114110|ref|XP_008456907.1|1.3e-8890.96PREDICTED: uncharacterized protein LOC103496719 isoform X2 [Cucumis melo][more]
gi|659114108|ref|XP_008456906.1|4.3e-8790.00PREDICTED: uncharacterized protein LOC103496719 isoform X1 [Cucumis melo][more]
gi|297736530|emb|CBI25401.3|6.9e-6972.11unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G001170.1CmaCh04G001170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 69..156
score: 4.0
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 70..159
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G001170Cucsa.144170Cucumber (Gy14) v1cgycmaB0401
CmaCh04G001170Cla007266Watermelon (97103) v1cmawmB691
CmaCh04G001170Csa5G218790Cucumber (Chinese Long) v2cmacuB747
CmaCh04G001170MELO3C020107Melon (DHL92) v3.5.1cmameB643
CmaCh04G001170ClCG07G004800Watermelon (Charleston Gray)cmawcgB674
CmaCh04G001170CSPI05G11300Wild cucumber (PI 183967)cmacpiB757
CmaCh04G001170MELO3C020107.2Melon (DHL92) v3.6.1cmamedB743
CmaCh04G001170CsaV3_5G010720Cucumber (Chinese Long) v3cmacucB0883
CmaCh04G001170Cla97C07G133230Watermelon (97103) v2cmawmbB781
CmaCh04G001170Bhi07G000441Wax gourdcmawgoB0890
CmaCh04G001170Carg24486Silver-seed gourdcarcmaB1249
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G001170Cucumber (Gy14) v2cgybcmaB674
CmaCh04G001170Cucumber (Gy14) v2cgybcmaB842
CmaCh04G001170Silver-seed gourdcarcmaB0214
CmaCh04G001170Silver-seed gourdcarcmaB0949
CmaCh04G001170Silver-seed gourdcarcmaB1385
CmaCh04G001170Cucumber (Chinese Long) v3cmacucB0913
CmaCh04G001170Watermelon (97103) v2cmawmbB729
CmaCh04G001170Wax gourdcmawgoB0865
CmaCh04G001170Cucurbita maxima (Rimu)cmacmaB274
CmaCh04G001170Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G001170Cucurbita maxima (Rimu)cmacmaB534
CmaCh04G001170Cucurbita maxima (Rimu)cmacmaB543
CmaCh04G001170Cucurbita moschata (Rifu)cmacmoB683
CmaCh04G001170Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G001170Cucurbita moschata (Rifu)cmacmoB730
CmaCh04G001170Cucurbita moschata (Rifu)cmacmoB736
CmaCh04G001170Cucurbita moschata (Rifu)cmacmoB751
CmaCh04G001170Wild cucumber (PI 183967)cmacpiB784
CmaCh04G001170Cucumber (Chinese Long) v2cmacuB774
CmaCh04G001170Watermelon (Charleston Gray)cmawcgB625
CmaCh04G001170Watermelon (97103) v1cmawmB742
CmaCh04G001170Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G001170Cucurbita pepo (Zucchini)cmacpeB722
CmaCh04G001170Cucurbita pepo (Zucchini)cmacpeB746
CmaCh04G001170Cucurbita pepo (Zucchini)cmacpeB758
CmaCh04G001170Bottle gourd (USVL1VR-Ls)cmalsiB660
CmaCh04G001170Bottle gourd (USVL1VR-Ls)cmalsiB671