Cla97C07G133230 (gene) Watermelon (97103) v2

NameCla97C07G133230
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionARM repeat superfamily protein
LocationCla97Chr07 : 5773515 .. 5774903 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAGAAGTTCTGTCTCTAAGTTCCCTTTTGATTTCTTTGAAAACTAGAAACATTTGAGTTAAATTTGTTCTTACAGGAGATAACTTGCTGCAACAATCTGTGTCGCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCTAGATTAGCTCGCTTTTCGATTGATGGTACCTCTATCTACCTCCTCACATTTTCCTCTCTGAATTGGTTATAGCTTTTGAAATTATTGATTGTTAAACTTGTCTCATACTTTTATACGCGTCGTTGGAACTTTTCCTGGGGTCAACAATGTCATACCTGCTCTCTTTCTACAGTAGATCTTGTTAACCCATCCCATTTCTCTCCCCAGGGTTCTATAATAAAATATTTTAAGACCCCTTTTTTTAGATAAAATAATCTCGACACCAACATAAATACATATAACAGTAGCTAAAACAAAGAACTTCAAATTAAAGATGAAGCTATGTTGTACTGCAACTTAGAGAAGGGTAAAATAGTGCATAGGAAAATAAAAGAAGCATCTTTGAAGAAGGGATCATAGATTTGCACTCTTTCTACCTTAGAAACTTGACCTTCAAATGAAATACATTTTGTAGCCTTTGTTTGCTATTTGCTAAGTTCTAATGAGACTTTTTCAACCTTTTTCCTAGTGCATTTGATCAAAATTTGCCAATTTAGAAGTCTAACTAGAAAACATGAAAGTTAAGACAGTCCGTCTCTAGTTTCACCCAAAACCTGATTGCACTTTTATTGGTAACTTTAAGAATCTCAACTGCTTTTATAGTCAGCGAAAGCCTGTTGAGTTATAGTATTCATTCTTTGCTATACAGATGAAAGAAGGATGAAAATAGTGGAGATAGGTGGTGCCCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGATGACCGGACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACGTTCAGGTTCAAATTCTAATTCACACATATATTACTTTAATTTATTATTTAAACTTTAGTTTCAGTCTTGTTTACTTAGGAGTCATGAATAACTCATCTGGATTTGTGGTATGCTAGTTTAGCCATGCTCGGTTTGGCTAGTTGAGTGCTGATCTTGAAACTAACACAATGATTTAGAGCTTCCTTATATGTCTAGAAACTGCGACGATGTAGGTGGTTTTACATCCATTTTGAAACATTCATTTTCCATATTTAGTTTTCTCCTTTGTTACATTTTCAGATGAAGCTGTTGGTGCGTTGCATAAAGCAGGGGCAATCTTGGTTATTAAATCTACTCCAGATTCGGGTGAAGATATGAAAGTGAATGAGTACAAGTCAGACCTAATGAAGAGATTTAGAGATCTTAGATATGATGTTTCATCTTGA

mRNA sequence

ATGGGAGATAACTTGCTGCAACAATCTGTGTCGCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCTAGATTAGCTCGCTTTTCGATTGATGATGAAAGAAGGATGAAAATAGTGGAGATAGGTGGTGCCCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGATGACCGGACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACGTTCAGATGAAGCTGTTGGTGCGTTGCATAAAGCAGGGGCAATCTTGGTTATTAAATCTACTCCAGATTCGGGTGAAGATATGAAAGTGAATGAGTACAAGTCAGACCTAATGAAGAGATTTAGAGATCTTAGATATGATGTTTCATCTTGA

Coding sequence (CDS)

ATGGGAGATAACTTGCTGCAACAATCTGTGTCGCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCTAGATTAGCTCGCTTTTCGATTGATGATGAAAGAAGGATGAAAATAGTGGAGATAGGTGGTGCCCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGATGACCGGACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACGTTCAGATGAAGCTGTTGGTGCGTTGCATAAAGCAGGGGCAATCTTGGTTATTAAATCTACTCCAGATTCGGGTGAAGATATGAAAGTGAATGAGTACAAGTCAGACCTAATGAAGAGATTTAGAGATCTTAGATATGATGTTTCATCTTGA

Protein sequence

MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRYDVSS
BLAST of Cla97C07G133230 vs. NCBI nr
Match: XP_004146451.1 (PREDICTED: uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 3.0e-56
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDD
Sbjct: 67  MGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDD 126

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKALHAIS SDEA GALHKAGAILVIKSTPDS EDMKVNEYKS+LMKRFRDLRY
Sbjct: 127 RTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRY 186

Query: 121 DVSS 125
           DVSS
Sbjct: 187 DVSS 190

BLAST of Cla97C07G133230 vs. NCBI nr
Match: XP_011655026.1 (PREDICTED: uncharacterized protein LOC101212969 isoform X2 [Cucumis sativus] >KGN50713.1 hypothetical protein Csa_5G218790 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 3.0e-56
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDD
Sbjct: 65  MGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDD 124

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKALHAIS SDEA GALHKAGAILVIKSTPDS EDMKVNEYKS+LMKRFRDLRY
Sbjct: 125 RTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRY 184

Query: 121 DVSS 125
           DVSS
Sbjct: 185 DVSS 188

BLAST of Cla97C07G133230 vs. NCBI nr
Match: XP_023526983.1 (uncharacterized protein LOC111790336 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 5.0e-56
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDD
Sbjct: 65  MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDD 124

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKALHAIS SDEAVGALHKAGAILVIKSTPDS EDM+VNEYKS+LMKRFRDL Y
Sbjct: 125 RTRKEALKALHAISHSDEAVGALHKAGAILVIKSTPDSAEDMQVNEYKSNLMKRFRDLSY 184

Query: 121 DVSS 125
           DVSS
Sbjct: 185 DVSS 188

BLAST of Cla97C07G133230 vs. NCBI nr
Match: XP_023526974.1 (uncharacterized protein LOC111790336 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 5.0e-56
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDD
Sbjct: 67  MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDD 126

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKALHAIS SDEAVGALHKAGAILVIKSTPDS EDM+VNEYKS+LMKRFRDL Y
Sbjct: 127 RTRKEALKALHAISHSDEAVGALHKAGAILVIKSTPDSAEDMQVNEYKSNLMKRFRDLSY 186

Query: 121 DVSS 125
           DVSS
Sbjct: 187 DVSS 190

BLAST of Cla97C07G133230 vs. NCBI nr
Match: XP_022941867.1 (uncharacterized protein LOC111447100 isoform X1 [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDD
Sbjct: 67  MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDD 126

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKALHAIS SDEAVGALHKAGAILVIKSTPDS ED +VNEYKS+LMKRFRDL Y
Sbjct: 127 RTRKEALKALHAISHSDEAVGALHKAGAILVIKSTPDSAEDTQVNEYKSNLMKRFRDLSY 186

Query: 121 DVSS 125
           DVSS
Sbjct: 187 DVSS 190

BLAST of Cla97C07G133230 vs. TrEMBL
Match: tr|A0A0A0KM85|A0A0A0KM85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218790 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.0e-56
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSVSLL+VKDPLFKRMGASRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDD
Sbjct: 65  MGDNLLQQSVSLLRVKDPLFKRMGASRLARFSIDDEKRMKIVEIGGAQELLNMLGAAKDD 124

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKALHAIS SDEA GALHKAGAILVIKSTPDS EDMKVNEYKS+LMKRFRDLRY
Sbjct: 125 RTRKEALKALHAISHSDEAAGALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRY 184

Query: 121 DVSS 125
           DVSS
Sbjct: 185 DVSS 188

BLAST of Cla97C07G133230 vs. TrEMBL
Match: tr|A0A1S3C497|A0A1S3C497_CUCME (uncharacterized protein LOC103496719 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496719 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.4e-53
Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSV+LL+VKDPLFKRMGASRLARFSIDD+RRMKIVE GGAQELLNML  AKDD
Sbjct: 65  MGDNLLQQSVTLLRVKDPLFKRMGASRLARFSIDDKRRMKIVEFGGAQELLNMLEVAKDD 124

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKAL+AIS SDEAVG LHKAGAILVIKSTPDS EDMKVNEYKS+LMKRFRDLRY
Sbjct: 125 RTRKEALKALYAISHSDEAVGYLHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRY 184

Query: 121 DVSS 125
           DVSS
Sbjct: 185 DVSS 188

BLAST of Cla97C07G133230 vs. TrEMBL
Match: tr|A0A1S3C4C9|A0A1S3C4C9_CUCME (uncharacterized protein LOC103496719 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496719 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.4e-53
Identity = 113/124 (91.13%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNLLQQSV+LL+VKDPLFKRMGASRLARFSIDD+RRMKIVE GGAQELLNML  AKDD
Sbjct: 67  MGDNLLQQSVTLLRVKDPLFKRMGASRLARFSIDDKRRMKIVEFGGAQELLNMLEVAKDD 126

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKAL+AIS SDEAVG LHKAGAILVIKSTPDS EDMKVNEYKS+LMKRFRDLRY
Sbjct: 127 RTRKEALKALYAISHSDEAVGYLHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRY 186

Query: 121 DVSS 125
           DVSS
Sbjct: 187 DVSS 190

BLAST of Cla97C07G133230 vs. TrEMBL
Match: tr|V4T789|V4T789_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032836mg PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.4e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNL+QQSVSLL+VKDPLFKRMGASRL RF+IDDERRMKIVEIGGAQEL+NMLGAAKDD
Sbjct: 67  MGDNLMQQSVSLLKVKDPLFKRMGASRLTRFAIDDERRMKIVEIGGAQELVNMLGAAKDD 126

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKAL A+S SDEA GALH AGAI VIKSTPDS +D +V +YKS L+KRF+DLRY
Sbjct: 127 RTRKEALKALAALSHSDEAAGALHHAGAISVIKSTPDSLDDAEVEKYKSSLLKRFQDLRY 186

Query: 121 DVSS 125
           D+ S
Sbjct: 187 DIPS 190

BLAST of Cla97C07G133230 vs. TrEMBL
Match: tr|A0A2H5NK47|A0A2H5NK47_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_052750 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.4e-48
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           MGDNL+QQSVSLL+VKDPLFKRMGASRL RF+IDDERRMKIVEIGGAQEL+NMLGAAKDD
Sbjct: 86  MGDNLMQQSVSLLKVKDPLFKRMGASRLTRFAIDDERRMKIVEIGGAQELVNMLGAAKDD 145

Query: 61  RTRKEALKALHAISRSDEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDLRY 120
           RTRKEALKAL A+S SDEA GALH AGAI VIKSTPDS +D +V +YKS L+KRF+DLRY
Sbjct: 146 RTRKEALKALAALSHSDEAAGALHHAGAISVIKSTPDSLDDAEVEKYKSSLLKRFQDLRY 205

Query: 121 DVSS 125
           D+ S
Sbjct: 206 DIPS 209

BLAST of Cla97C07G133230 vs. TAIR10
Match: AT3G56210.5 (ARM repeat superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 2.2e-37
Identity = 79/126 (62.70%), Postives = 103/126 (81.75%), Query Frame = 0

Query: 1   MGDNLLQQSVSLLQVKDPLFKRMGASRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDD 60
           +GDNL+ QS+SLL VKDPLFKRMGASRL+RF+IDDERRMK+VE+GGAQELL+MLG+AKDD
Sbjct: 67  LGDNLIHQSISLLHVKDPLFKRMGASRLSRFAIDDERRMKVVEMGGAQELLHMLGSAKDD 126

Query: 61  RTRKEALKALHAISRS--DEAVGALHKAGAILVIKSTPDSGEDMKVNEYKSDLMKRFRDL 120
           +TRKEALKAL A+S+S   EA   L   GA+ ++KSTP+S ED  ++ YKS+++++  + 
Sbjct: 127 KTRKEALKALAALSKSVAGEAAKFLGSNGALSIVKSTPNSLEDSDISTYKSNILEKLVEK 186

Query: 121 RYDVSS 125
              VSS
Sbjct: 187 NLAVSS 192

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004146451.13.0e-5695.16PREDICTED: uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus][more]
XP_011655026.13.0e-5695.16PREDICTED: uncharacterized protein LOC101212969 isoform X2 [Cucumis sativus] >KG... [more]
XP_023526983.15.0e-5695.16uncharacterized protein LOC111790336 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023526974.15.0e-5695.16uncharacterized protein LOC111790336 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022941867.12.5e-5594.35uncharacterized protein LOC111447100 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
tr|A0A0A0KM85|A0A0A0KM85_CUCSA2.0e-5695.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218790 PE=4 SV=1[more]
tr|A0A1S3C497|A0A1S3C497_CUCME3.4e-5391.13uncharacterized protein LOC103496719 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3C4C9|A0A1S3C4C9_CUCME3.4e-5391.13uncharacterized protein LOC103496719 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|V4T789|V4T789_9ROSI7.4e-4882.26Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032836mg PE=4 ... [more]
tr|A0A2H5NK47|A0A2H5NK47_CITUN7.4e-4882.26Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_052750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT3G56210.52.2e-3762.70ARM repeat superfamily protein[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0033036 macromolecule localization
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0071702 organic substance transport
biological_process GO:1902582 single-organism intracellular transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G133230.1Cla97C07G133230.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 3..122
e-value: 4.8E-10
score: 41.5
IPR016024Armadillo-type foldSUPERFAMILYSSF48371ARM repeatcoord: 10..98

The following gene(s) are paralogous to this gene:

None