CmaCh03G014810 (gene) Cucurbita maxima (Rimu)

NameCmaCh03G014810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionVacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein
LocationCma_Chr03 : 9229950 .. 9231222 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGCGTCATTACGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCATATTGTTATATGGTTTTAACCATAATTTGATTCCTGGTAAGATTTATTGGCATAAATACTAGCATCTATTGCTTATGCAAGATTTTTAGCGGTCATCTTTTTCAGTATGTGCAGACTTGTGTTTAATTATGAATCCAAGATACCAGTCTTGTGTTGGACTCACTACCCAATTCAAGAGGAACCAAGAGCTCTCTCTACGCAGTGTACTATTTTCTCAAAGGCACCCTCACACACGCTGCCTACCACACTATTAAAAGCCCACACCAGATTACACTAACTTTCAGAATTGGACCTCCCATTTATGCCCCTCTTGTTATATTGTGATTAGAGGCCTGATACTAACTTACTTCCTCATTGATATAAAGAACCCAGTCTTTTCTAGCTTTCTTTTTATATTCTGATTATTACCAGTAAGTGCATTTTGTTCTTGTCTGGATGGTGTTACCTAAAGGGCATGGTTTGGTATGCCATCTTTACTGCTTCATGGCTACTGGTCGTCAGACGCAATTATTGATTGATGATGCATACGTTTAGGGAATCGTAAAATTTTAATTGCACGCTCATAATAATCCATTTATCTTCCTGTCTGTAAATTTGTTAGTATAGAAACAACTTTTATGTGAAATGTAAAGTATTTCTTAGGAACGTGGAAACCTTGAACCCCCTCGTTTTCCTTCCTGAACTAGGTTAATGTAAACCTCTCTCAATAATGCTTGTCCCTCTTCCTCACTACCTTCTTTACTCATAACTGTTGGTCATTACCAAATCACTCTAACACGACTTCTGATTTGGTTCTTCTAAGATAATGAATTTTGTGTCTAACAAAAGTATTACTTCATATTTGTTTATTATTATCTTTTATTGGCGTTTTGTTCGTTCTTTTAGTTTTGATCTTGTACTTTTTGTTTATTGTCATTAACCTGTCTTTTCTTATTATTTTCTTGCATGCGCGTGATTACATTTCTAAGTAAATACTTTCCTGGACCAGGTTCAACACATTTGAATCCGCATTCTCTTACGCTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAATGTTGTCATTGCCATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAACCAGGCTCCTGGGAAAGCAGAGGACCCCTCACAAGCCAATAATAAGAAGGAAGAATAG

mRNA sequence

ATGGCAGGCGTCATTACGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCATATTGTTATATGGTTTTAACCATAATTTGATTCCTGGTTCAACACATTTGAATCCGCATTCTCTTACGCTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAATGTTGTCATTGCCATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAACCAGGCTCCTGGGAAAGCAGAGGACCCCTCACAAGCCAATAATAAGAAGGAAGAATAG

Coding sequence (CDS)

ATGGCAGGCGTCATTACGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCATATTGTTATATGGTTTTAACCATAATTTGATTCCTGGTTCAACACATTTGAATCCGCATTCTCTTACGCTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAATGTTGTCATTGCCATTTATATTATCATGGCAATGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTGTTGCCGAGGCAAAAGCTAGTATAAACCAGGCTCCTGGGAAAGCAGAGGACCCCTCACAAGCCAATAATAAGAAGGAAGAATAG

Protein sequence

MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE
BLAST of CmaCh03G014810 vs. TrEMBL
Match: A0A0A0KPB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G526400 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.0e-41
Identity = 93/106 (87.74%), Postives = 97/106 (91.51%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MA VI KFFIASLFMWITPI LL+GFNHN IPGST LNPHSLTLLSGFLAVISVNVVIAI
Sbjct: 173 MANVIMKFFIASLFMWITPITLLHGFNHNWIPGSTQLNPHSLTLLSGFLAVISVNVVIAI 232

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE 107
           YIIMAMKEPSSKHEPDP F+AEAKASINQ+ GKA+ PSQA NKKEE
Sbjct: 233 YIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADGPSQAQNKKEE 278

BLAST of CmaCh03G014810 vs. TrEMBL
Match: F6HFT6_VITVI (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Vitis vinifera GN=VIT_01s0011g01270 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-33
Identity = 77/106 (72.64%), Postives = 91/106 (85.85%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MAGVI KFFIAS+ MWI PI +LYGFNHNL PGST L+ +S TLLSGF+AVISVN+VIA 
Sbjct: 1   MAGVIKKFFIASMLMWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQA-PGKAEDPSQANNKKE 106
           YI MAMKEPS KHEPDPAF+A AKAS++Q+ PG+ EDPSQ+ +K+E
Sbjct: 61  YIFMAMKEPSDKHEPDPAFLAAAKASVSQSTPGETEDPSQSRDKQE 106

BLAST of CmaCh03G014810 vs. TrEMBL
Match: A0A067JWH7_JATCU (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Jatropha curcas GN=JCGZ_27104 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 74/106 (69.81%), Postives = 91/106 (85.85%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MAGVI KFFI S+FMW+ P+++LY FN++L+PG THL+PH+LTLLSGFLAVISVNVVIA 
Sbjct: 1   MAGVIQKFFITSMFMWMAPVLILYAFNNDLLPGVTHLSPHALTLLSGFLAVISVNVVIAF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE 107
           YI MAMKEP+ KHEPDP FV++AKAS++Q  GKAE+ S  + KKEE
Sbjct: 61  YIYMAMKEPAEKHEPDPKFVSDAKASVSQLTGKAEESSSQSVKKEE 106

BLAST of CmaCh03G014810 vs. TrEMBL
Match: W9QP27_9ROSA (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Morus notabilis GN=L484_020864 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.5e-32
Identity = 73/105 (69.52%), Postives = 91/105 (86.67%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           M GVI KFFIAS+ MW+TPI +LYGFNHNL+PGS++L+PH+LTL+SGF+AVISVN+VIA 
Sbjct: 1   MKGVIQKFFIASMLMWMTPIAILYGFNHNLLPGSSNLSPHTLTLVSGFVAVISVNIVIAF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKE 106
           YI MAMKEPS KHEPDPAF+AEAKAS+NQ+   ++  SQ+  K+E
Sbjct: 61  YIYMAMKEPSHKHEPDPAFLAEAKASVNQSANDSDKSSQSLKKEE 105

BLAST of CmaCh03G014810 vs. TrEMBL
Match: V4TMZ1_9ROSI (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Citrus clementina GN=CICLE_v10017270mg PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.5e-31
Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MA V+ KFFIAS+FMW+ P+ +LY FNHNL+PGST+L P+S TLLSGFLAVISVN+VIA 
Sbjct: 1   MAAVVKKFFIASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKE 106
           YI MAM+EPS KHEPDP F+AEAKAS++Q   KAE  S++  KKE
Sbjct: 61  YIYMAMREPSDKHEPDPKFLAEAKASVSQPTDKAEVSSESLKKKE 105

BLAST of CmaCh03G014810 vs. TAIR10
Match: AT1G05780.1 (AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-30
Identity = 68/106 (64.15%), Postives = 81/106 (76.42%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MAGV+ KF IAS+FMWI P+ +LYGFNHNL+PGST L+PHSL LLSGFLAV+SVN VI  
Sbjct: 1   MAGVMHKFLIASMFMWILPVAILYGFNHNLLPGSTTLSPHSLILLSGFLAVVSVNTVIVF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE 107
           YI MAMKEP+ KH+PD AF+AEAK S+N+    A        KK+E
Sbjct: 61  YICMAMKEPADKHKPDAAFLAEAKDSVNKLTKGATSSDDHALKKQE 106

BLAST of CmaCh03G014810 vs. TAIR10
Match: AT2G31710.1 (AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain)

HSP 1 Score: 124.4 bits (311), Expect = 4.2e-29
Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MAGV+ KF IAS+FMWI PI +LYGFN++L+PGST L+PHSLTLLSGFLAV+SVNVVI  
Sbjct: 1   MAGVMQKFLIASMFMWILPIAILYGFNNDLLPGSTTLSPHSLTLLSGFLAVVSVNVVIVF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKE 106
           YI +A+KEP+ KH+PD +FVAEAK S+ +      +   A  K+E
Sbjct: 61  YICLALKEPADKHKPDASFVAEAKDSVKKLTSGVTNTDPALKKQE 105

BLAST of CmaCh03G014810 vs. NCBI nr
Match: gi|659077983|ref|XP_008439487.1| (PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 3.4e-41
Identity = 93/106 (87.74%), Postives = 99/106 (93.40%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MA VITKFFIASLFMWITPI LL+GFNHN IPGST LNPHSLTLLSGFLAVISVNVVI I
Sbjct: 1   MANVITKFFIASLFMWITPITLLHGFNHNWIPGSTRLNPHSLTLLSGFLAVISVNVVIVI 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE 107
           YIIMAMKEPSSKHEPDPAF+AEAKASINQ+ GKA+ PS+A+NKKEE
Sbjct: 61  YIIMAMKEPSSKHEPDPAFLAEAKASINQSTGKADGPSEAHNKKEE 106

BLAST of CmaCh03G014810 vs. NCBI nr
Match: gi|449433513|ref|XP_004134542.1| (PREDICTED: uncharacterized protein LOC101206493 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40
Identity = 93/106 (87.74%), Postives = 97/106 (91.51%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MA VI KFFIASLFMWITPI LL+GFNHN IPGST LNPHSLTLLSGFLAVISVNVVIAI
Sbjct: 1   MANVIMKFFIASLFMWITPITLLHGFNHNWIPGSTQLNPHSLTLLSGFLAVISVNVVIAI 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE 107
           YIIMAMKEPSSKHEPDP F+AEAKASINQ+ GKA+ PSQA NKKEE
Sbjct: 61  YIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADGPSQAQNKKEE 106

BLAST of CmaCh03G014810 vs. NCBI nr
Match: gi|700194302|gb|KGN49506.1| (hypothetical protein Csa_6G526400 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40
Identity = 93/106 (87.74%), Postives = 97/106 (91.51%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MA VI KFFIASLFMWITPI LL+GFNHN IPGST LNPHSLTLLSGFLAVISVNVVIAI
Sbjct: 173 MANVIMKFFIASLFMWITPITLLHGFNHNWIPGSTQLNPHSLTLLSGFLAVISVNVVIAI 232

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKEE 107
           YIIMAMKEPSSKHEPDP F+AEAKASINQ+ GKA+ PSQA NKKEE
Sbjct: 233 YIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADGPSQAQNKKEE 278

BLAST of CmaCh03G014810 vs. NCBI nr
Match: gi|470118803|ref|XP_004295511.1| (PREDICTED: uncharacterized protein LOC101310395 [Fragaria vesca subsp. vesca])

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-33
Identity = 78/105 (74.29%), Postives = 91/105 (86.67%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MAGVITKFF ASLFMWITP+ +LYG+N+NLIPGS+ L+PH+LTLLSGFLAV+SVN+VIA 
Sbjct: 1   MAGVITKFFTASLFMWITPVAILYGYNNNLIPGSSDLSPHTLTLLSGFLAVVSVNIVIAF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKE 106
           YI MAMKEPS KHEPDPAF+AEAKASINQ    A   SQ++ K+E
Sbjct: 61  YIYMAMKEPSDKHEPDPAFLAEAKASINQCTTDAGSSSQSSKKEE 105

BLAST of CmaCh03G014810 vs. NCBI nr
Match: gi|470120994|ref|XP_004296570.1| (PREDICTED: uncharacterized protein LOC101295033 [Fragaria vesca subsp. vesca])

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-33
Identity = 77/105 (73.33%), Postives = 90/105 (85.71%), Query Frame = 1

Query: 1   MAGVITKFFIASLFMWITPIILLYGFNHNLIPGSTHLNPHSLTLLSGFLAVISVNVVIAI 60
           MAGVITKFF ASLFMWI P+ +LYG+N+NLIPGS+ L+PH+LTLLSGFLAV+SVN+VIA 
Sbjct: 1   MAGVITKFFTASLFMWIAPVAILYGYNNNLIPGSSDLSPHTLTLLSGFLAVVSVNIVIAF 60

Query: 61  YIIMAMKEPSSKHEPDPAFVAEAKASINQAPGKAEDPSQANNKKE 106
           YI MAMKEPS KHEPDPAF+AEAKASINQ+   A   SQ++ K E
Sbjct: 61  YIYMAMKEPSDKHEPDPAFLAEAKASINQSTADAGSSSQSSKKNE 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KPB7_CUCSA7.0e-4187.74Uncharacterized protein OS=Cucumis sativus GN=Csa_6G526400 PE=3 SV=1[more]
F6HFT6_VITVI4.1e-3372.64Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Vitis vinife... [more]
A0A067JWH7_JATCU1.2e-3269.81Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Jatropha cur... [more]
W9QP27_9ROSA3.5e-3269.52Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Morus notabi... [more]
V4TMZ1_9ROSI8.5e-3168.57Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Citrus cleme... [more]
Match NameE-valueIdentityDescription
AT1G05780.12.2e-3064.15 Vacuolar ATPase assembly integral membrane protein VMA21-like domain[more]
AT2G31710.14.2e-2961.90 Vacuolar ATPase assembly integral membrane protein VMA21-like domain[more]
Match NameE-valueIdentityDescription
gi|659077983|ref|XP_008439487.1|3.4e-4187.74PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo][more]
gi|449433513|ref|XP_004134542.1|1.0e-4087.74PREDICTED: uncharacterized protein LOC101206493 [Cucumis sativus][more]
gi|700194302|gb|KGN49506.1|1.0e-4087.74hypothetical protein Csa_6G526400 [Cucumis sativus][more]
gi|470118803|ref|XP_004295511.1|1.2e-3374.29PREDICTED: uncharacterized protein LOC101310395 [Fragaria vesca subsp. vesca][more]
gi|470120994|ref|XP_004296570.1|2.6e-3373.33PREDICTED: uncharacterized protein LOC101295033 [Fragaria vesca subsp. vesca][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019013Vma21
Vocabulary: Biological Process
TermDefinition
GO:0070072vacuolar proton-transporting V-type ATPase complex assembly
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0012507 ER to Golgi transport vesicle membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G014810.1CmaCh03G014810.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019013Vacuolar ATPase assembly integral membrane protein Vma21HAMAPMF_03058VMA21coord: 1..87
score: 20
IPR019013Vacuolar ATPase assembly integral membrane protein Vma21PANTHERPTHR31792FAMILY NOT NAMEDcoord: 1..88
score: 3.7
IPR019013Vacuolar ATPase assembly integral membrane protein Vma21PFAMPF09446VMA21coord: 4..66
score: 7.7