CmaCh03G011600 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G011600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Terminal flower
Location	Cma_Chr03 : 7797993 .. 7798828 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAGCAGCCTCTGGTTCTGGGAAGAGTGATCGGAGATGTGGTGGATCCCTTCATCCCAACCATTAAAATGTGTGCCACTTTCAGCAACAAGCAAGTCCTCAACGGCCATGAATTCTTCCCCTCTTCCCTCTCCTTCAAGCCCAGGGTTCTCATTCAAGGAGAAGACATGAGATCCCTGTTCACTCTGGTAACCTTCAATTCTTTCTACCCCTTCTTCTTTCTAAATTTGACCCTTTTTTGTTGTTGTTCTTGCTTAGATCATGGTTGACCCAGATGTCCCTGGCCCTAGTGATCCATACATGAGGGAACACCTTCACTGGTATTTCAGCTACAATGTGCAATAACATCTTTCTCTGAGGACTAGAGTTGCAAAAAACATAACTTTCTTGAAAACCCATTTCCAAAAATGGATTTTTTAAAAAGGGTATCTAACAAAATTCGAAATGGTTACCAAATTCTTGGTCTTTTTTTTCAGGTTGGTGACTGACATTCCAGGAACTACGGATGCTACTTTTGGTAATAGGGTTATTTCCTTTGGTTATCATTCATTAAAAGGGAATGAAATGAAGAGATTTGATGGGTTCTTTTCTTTTTCTTTTTTTGGGTGAGACAGGAAAGGAATTAATGAGCTATGAAATTCCAAAGCCGACAATAGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACGGCGTCGTTCAGTGAACCCTCCATCTTCAAGGGATCGTTTCAACACTCGAAGATTTTCAGCTGAGAATGATTTGGGTCTTCCTGTGGCTGCTGTTTATTTCAATGCACAGAGAGAAACTGCTGCAAGAAGGCGATAG

mRNA sequence

ATGGCCGAGCAGCCTCTGGTTCTGGGAAGAGTGATCGGAGATGTGGTGGATCCCTTCATCCCAACCATTAAAATGTGTGCCACTTTCAGCAACAAGCAAGTCCTCAACGGCCATGAATTCTTCCCCTCTTCCCTCTCCTTCAAGCCCAGGGTTCTCATTCAAGGAGAAGACATGAGATCCCTGTTCACTCTGATCATGGTTGACCCAGATGTCCCTGGCCCTAGTGATCCATACATGAGGGAACACCTTCACTGGTTGGTGACTGACATTCCAGGAACTACGGATGCTACTTTTGGAAAGGAATTAATGAGCTATGAAATTCCAAAGCCGACAATAGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACGGCGTCGTTCAGTGAACCCTCCATCTTCAAGGGATCGTTTCAACACTCGAAGATTTTCAGCTGAGAATGATTTGGGTCTTCCTGTGGCTGCTGTTTATTTCAATGCACAGAGAGAAACTGCTGCAAGAAGGCGATAG

Coding sequence (CDS)

ATGGCCGAGCAGCCTCTGGTTCTGGGAAGAGTGATCGGAGATGTGGTGGATCCCTTCATCCCAACCATTAAAATGTGTGCCACTTTCAGCAACAAGCAAGTCCTCAACGGCCATGAATTCTTCCCCTCTTCCCTCTCCTTCAAGCCCAGGGTTCTCATTCAAGGAGAAGACATGAGATCCCTGTTCACTCTGATCATGGTTGACCCAGATGTCCCTGGCCCTAGTGATCCATACATGAGGGAACACCTTCACTGGTTGGTGACTGACATTCCAGGAACTACGGATGCTACTTTTGGAAAGGAATTAATGAGCTATGAAATTCCAAAGCCGACAATAGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACGGCGTCGTTCAGTGAACCCTCCATCTTCAAGGGATCGTTTCAACACTCGAAGATTTTCAGCTGAGAATGATTTGGGTCTTCCTGTGGCTGCTGTTTATTTCAATGCACAGAGAGAAACTGCTGCAAGAAGGCGATAG

Protein sequence

MAEQPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFKQKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR

Homology

[Close]

BLAST of CmaCh03G011600 vs. Swiss-Prot
Match: TFL1_ARATH (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.9e-68
Identity = 118/168 (70.24%), Postives = 147/168 (87.50%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 63
           +PL++GRV+GDV+D F PT KM  +++ KQV NGHE FPSS+S KPRV I G D+RS FT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 64  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 123
           L+M+DPDVPGPSDP+++EHLHW+VT+IPGTTDATFGKE++SYE+P+P+IGIHRFVFVLF+
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 124 QKRRRSVNPP-SSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           QK+RR + P   SRD FNTR+F+ E DLGLPVAAV+FNAQRETAAR+R
Sbjct: 130 QKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of CmaCh03G011600 vs. Swiss-Prot
Match: CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.8e-67
Identity = 118/168 (70.24%), Postives = 145/168 (86.31%), Query Frame = 1


Query: 5   PLVLGRVIGDVVDPFIPTIKMCATF-SNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 64
           PLV+GRVIG+VVD F P++KM  T+ S+K V NGHE FPSS++ KPRV + G D+RS FT
Sbjct: 8   PLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFFT 67

Query: 65  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 124
           +IM+DPDVPGPSDPY+REHLHW+VTDIPGTTD +FGKE++ YE+P+P IGIHRFVF+LFK
Sbjct: 68  MIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLLFK 127

Query: 125 QKRRRSV-NPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           QK+R++V   P SRDRFNTR+F+ EN+LG PVAAV+FN QRETAARRR
Sbjct: 128 QKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CmaCh03G011600 vs. Swiss-Prot
Match: CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.7e-66
Identity = 117/168 (69.64%), Postives = 145/168 (86.31%), Query Frame = 1


Query: 5   PLVLGRVIGDVVDPFIPTIKMCATF-SNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 64
           PLV+GRVIG+VVD F P++KM  T+ S+K V NGHE FPSS++ KPRV + G D+RS FT
Sbjct: 8   PLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFFT 67

Query: 65  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 124
           LIM+DPDVPGPSDPY+REHLHW+VTDIPGTTD +FG+E++ YE+P+P IGIHRFVF+LFK
Sbjct: 68  LIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVFLLFK 127

Query: 125 QKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           QK+R++ ++ P SRDRFNTR+FS EN+LG PVAA +FN QRETAARRR
Sbjct: 128 QKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

[Close]

BLAST of CmaCh03G011600 vs. Swiss-Prot
Match: SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.9e-66
Identity = 115/169 (68.05%), Postives = 147/169 (86.98%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSLF 63
           +PLV+GRVIG+VVD F P++KM   ++N K V NGHEFFPSS++ KPRV + G D+RS F
Sbjct: 7   EPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRSFF 66

Query: 64  TLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLF 123
           TLIM+DPDVPGPSDPY+REHLHW+VTDIPGTTD +FG+E++ YE+P+P IGIHRFVF+LF
Sbjct: 67  TLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFLLF 126

Query: 124 KQKRRRSV-NPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           KQK+R+++ + P SRD+F++R+FS EN+LG PVAAV+FN QRETAARRR
Sbjct: 127 KQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CmaCh03G011600 vs. Swiss-Prot
Match: CEN_ARATH (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 8.4e-66
Identity = 117/172 (68.02%), Postives = 144/172 (83.72%), Query Frame = 1


Query: 1   MAEQPLVLGRVIGDVVDPFIPTIKMCATF-SNKQVLNGHEFFPSSLSFKPRVLIQGEDMR 60
           ++  PL++GRVIGDVVD  +  +KM  T+ S+KQV NGHE FPS +++KP+V + G DMR
Sbjct: 4   ISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMR 63

Query: 61  SLFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVF 120
           S FTL+M DPDVPGPSDPY+REHLHW+VTDIPGTTD +FGKE++ YE+P+P IGIHRFV+
Sbjct: 64  SFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVY 123

Query: 121 VLFKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           +LFKQ RR S V+ PS RD+FNTR F+ ENDLGLPVAAV+FN QRETAARRR
Sbjct: 124 LLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CmaCh03G011600 vs. TrEMBL
Match: A0A0A0KFB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452100 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.5e-82
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLSFKPRV IQGEDMR L
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSFKPRVHIQGEDMRPL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVL 122
           FTL+MVDPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHRFVF+L
Sbjct: 73  FTLVMVDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFIL 132

Query: 123 FKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           FKQK+RRS VNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 FKQKQRRSVVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 182

[Close]

BLAST of CmaCh03G011600 vs. TrEMBL
Match: B9ZYL1_CUCSA (TFL1-like protein OS=Cucumis sativus GN=CsTFL1a PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 7.6e-82
Identity = 153/170 (90.00%), Postives = 159/170 (93.53%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLSFKPRV IQGEDMRSL
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSFKPRVHIQGEDMRSL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVL 122
           FT +MVDPDVPGP DPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHRFVF+L
Sbjct: 73  FTRVMVDPDVPGPRDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFIL 132

Query: 123 FKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           FKQK+RRS VNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 FKQKQRRSVVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 182

[Close]

BLAST of CmaCh03G011600 vs. TrEMBL
Match: B0ZT31_PONTR (CTRSTFL-like protein OS=Poncirus trifoliata PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.6e-74
Identity = 132/167 (79.04%), Postives = 150/167 (89.82%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 63
           +PL +GRVIGDV++ F P+IKM  T++NKQV NGHE FPS++  KPRV IQG DMRS FT
Sbjct: 7   EPLAVGRVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 66

Query: 64  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 123
           L+M DPDVPGPSDPY+REHLHW+VTDIPGTTDATFG+EL+SYEIP+P IGIHRFVFVLFK
Sbjct: 67  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 126

Query: 124 QKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           Q RR++VNPPSSRD FNTR F+AENDLGLPVAAVYFNAQRETAARRR
Sbjct: 127 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 173

[Close]

BLAST of CmaCh03G011600 vs. TrEMBL
Match: V4T1S3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013475mg PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.6e-74
Identity = 132/167 (79.04%), Postives = 150/167 (89.82%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 63
           +PL +GRVIGDV++ F P+IKM  T++NKQV NGHE FPS++  KPRV IQG DMRS FT
Sbjct: 7   EPLAVGRVIGDVIESFTPSIKMSVTYNNKQVCNGHELFPSTVVSKPRVEIQGGDMRSFFT 66

Query: 64  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 123
           L+M DPDVPGPSDPY+REHLHW+VTDIPGTTDATFG+EL+SYEIP+P IGIHRFVFVLFK
Sbjct: 67  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGRELVSYEIPRPNIGIHRFVFVLFK 126

Query: 124 QKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           Q RR++VNPPSSRD FNTR F+AENDLGLPVAAVYFNAQRETAARRR
Sbjct: 127 QTRRQTVNPPSSRDHFNTRAFAAENDLGLPVAAVYFNAQRETAARRR 173

[Close]

BLAST of CmaCh03G011600 vs. TrEMBL
Match: A4GG72_VITVI (TFL1B protein OS=Vitis vinifera GN=TFL1B PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.4e-74
Identity = 129/167 (77.25%), Postives = 152/167 (91.02%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 63
           +PL++GRVIGDV+DPF PTIKM  T+ NKQ+ NG+E +PSS++ KPRV +QG D+RS FT
Sbjct: 6   EPLIVGRVIGDVLDPFPPTIKMTVTYHNKQICNGYELYPSSITVKPRVEVQGGDLRSFFT 65

Query: 64  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 123
           L+M DPDVPGPSDPY+REHLHW+VTDIPGTTDATFG+E++SYEIPKP IGIHRFVFVLFK
Sbjct: 66  LVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGREVLSYEIPKPNIGIHRFVFVLFK 125

Query: 124 QKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           QKRR++VN P+SRD FNTR F+AENDLGLPVAAV+FNAQRETAARRR
Sbjct: 126 QKRRQTVNTPTSRDHFNTRSFAAENDLGLPVAAVFFNAQRETAARRR 172

[Close]

BLAST of CmaCh03G011600 vs. TAIR10
Match: AT5G03840.1 (AT5G03840.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 258.1 bits (658), Expect = 3.9e-69
Identity = 118/168 (70.24%), Postives = 147/168 (87.50%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFT 63
           +PL++GRV+GDV+D F PT KM  +++ KQV NGHE FPSS+S KPRV I G D+RS FT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 64  LIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFK 123
           L+M+DPDVPGPSDP+++EHLHW+VT+IPGTTDATFGKE++SYE+P+P+IGIHRFVFVLF+
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 124 QKRRRSVNPP-SSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           QK+RR + P   SRD FNTR+F+ E DLGLPVAAV+FNAQRETAAR+R
Sbjct: 130 QKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of CmaCh03G011600 vs. TAIR10
Match: AT2G27550.1 (AT2G27550.1 centroradialis)

HSP 1 Score: 251.1 bits (640), Expect = 4.7e-67
Identity = 117/172 (68.02%), Postives = 144/172 (83.72%), Query Frame = 1


Query: 1   MAEQPLVLGRVIGDVVDPFIPTIKMCATF-SNKQVLNGHEFFPSSLSFKPRVLIQGEDMR 60
           ++  PL++GRVIGDVVD  +  +KM  T+ S+KQV NGHE FPS +++KP+V + G DMR
Sbjct: 4   ISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMR 63

Query: 61  SLFTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVF 120
           S FTL+M DPDVPGPSDPY+REHLHW+VTDIPGTTD +FGKE++ YE+P+P IGIHRFV+
Sbjct: 64  SFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVY 123

Query: 121 VLFKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           +LFKQ RR S V+ PS RD+FNTR F+ ENDLGLPVAAV+FN QRETAARRR
Sbjct: 124 LLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of CmaCh03G011600 vs. TAIR10
Match: AT5G62040.1 (AT5G62040.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 218.4 bits (555), Expect = 3.4e-57
Identity = 107/169 (63.31%), Postives = 131/169 (77.51%), Query Frame = 1


Query: 4   QPLVLGRVIGDVVDPFIPTIKMCATF-SNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLF 63
           +PL++GRVIGDV++ F P++ M  TF SN  V NGHE  PS L  KPRV I G+D+RS F
Sbjct: 6   EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFF 65

Query: 64  TLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLF 123
           TLIM+DPD P PS+PYMRE+LHW+VTDIPGTTDA+FG+E++ YE PKP  GIHR+VF LF
Sbjct: 66  TLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFALF 125

Query: 124 KQKRRRSVN-PPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           KQ+ R++V   P +R+ FNT  FS+   L  PVAAVYFNAQRETA RRR
Sbjct: 126 KQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

[Close]

BLAST of CmaCh03G011600 vs. TAIR10
Match: AT1G65480.1 (AT1G65480.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 198.0 bits (502), Expect = 4.8e-51
Identity = 91/166 (54.82%), Postives = 121/166 (72.89%), Query Frame = 1


Query: 5   PLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFTL 64
           PL++ RV+GDV+DPF  +I +  T+  ++V NG +  PS +  KPRV I GED+R+ +TL
Sbjct: 8   PLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTL 67

Query: 65  IMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFKQ 124
           +MVDPDVP PS+P++RE+LHWLVTDIP TT  TFG E++ YE P PT GIHR VF+LF+Q
Sbjct: 68  VMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILFRQ 127

Query: 125 KRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
             R++V  P  R  FNTR F+   +LGLPVAAV++N QRE+    R
Sbjct: 128 LGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

[Close]

BLAST of CmaCh03G011600 vs. TAIR10
Match: AT4G20370.1 (AT4G20370.1 PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1


Query: 5   PLVLGRVIGDVVDPFIPTIKMCATFSNKQVLNGHEFFPSSLSFKPRVLIQGEDMRSLFTL 64
           PLV+G V+GDV+DPF   + +  T+ +++V NG +  PS +  KP V I G+D R+ +TL
Sbjct: 8   PLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTL 67

Query: 65  IMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVLFKQ 124
           +MVDPDVP PS+P+ RE+LHWLVTDIP TT   FG E++ YE P+P  GIHR V VLF+Q
Sbjct: 68  VMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLFRQ 127

Query: 125 KRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
             R++V  P  R +FNTR F+   +LGLPVAA YFN QRE     R
Sbjct: 128 LGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGR 173

[Close]

BLAST of CmaCh03G011600 vs. NCBI nr
Match: gi|659125205|ref|XP_008462564.1| (PREDICTED: CEN-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 4.0e-84
Identity = 155/169 (91.72%), Postives = 160/169 (94.67%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLS KPRV IQGEDMRSL
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSLKPRVHIQGEDMRSL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVL 122
           FTL+MVDPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHRFVF+L
Sbjct: 73  FTLVMVDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFIL 132

Query: 123 FKQKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           FKQKRRRSVNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 FKQKRRRSVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 181

[Close]

BLAST of CmaCh03G011600 vs. NCBI nr
Match: gi|659125203|ref|XP_008462563.1| (PREDICTED: CEN-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 155/171 (90.64%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLS KPRV IQGEDMRSL
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSLKPRVHIQGEDMRSL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATF--GKELMSYEIPKPTIGIHRFVF 122
           FTL+MVDPDVPGPSDPY+REHLHWLVTDIPGTTDATF  GKE MSYEIPKPTIGIHRFVF
Sbjct: 73  FTLVMVDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGIGKEEMSYEIPKPTIGIHRFVF 132

Query: 123 VLFKQKRRRSVNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           +LFKQKRRRSVNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 ILFKQKRRRSVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 183

[Close]

BLAST of CmaCh03G011600 vs. NCBI nr
Match: gi|778717475|ref|XP_011657698.1| (PREDICTED: CEN-like protein 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-82
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLSFKPRV IQGEDMR L
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSFKPRVHIQGEDMRPL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVL 122
           FTL+MVDPDVPGPSDPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHRFVF+L
Sbjct: 73  FTLVMVDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFIL 132

Query: 123 FKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           FKQK+RRS VNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 FKQKQRRSVVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 182

[Close]

BLAST of CmaCh03G011600 vs. NCBI nr
Match: gi|224775505|dbj|BAH28254.1| (TFL1-like protein [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 1.1e-81
Identity = 153/170 (90.00%), Postives = 159/170 (93.53%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLSFKPRV IQGEDMRSL
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSFKPRVHIQGEDMRSL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATFGKELMSYEIPKPTIGIHRFVFVL 122
           FT +MVDPDVPGP DPY+REHLHWLVTDIPGTTDATFGKE MSYEIPKPTIGIHRFVF+L
Sbjct: 73  FTRVMVDPDVPGPRDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFIL 132

Query: 123 FKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           FKQK+RRS VNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 FKQKQRRSVVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 182

[Close]

BLAST of CmaCh03G011600 vs. NCBI nr
Match: gi|778717472|ref|XP_011657697.1| (PREDICTED: CEN-like protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 7.1e-81
Identity = 154/172 (89.53%), Postives = 160/172 (93.02%), Query Frame = 1


Query: 3   EQPLVLGRVIGDVVDPFIPTIKMCATFSN-KQVLNGHEFFPSSLSFKPRVLIQGEDMRSL 62
           + PLVLGRVIGDVVDPF PTIKM  TF+N KQVLNGHEFFPSSLSFKPRV IQGEDMR L
Sbjct: 13  QNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSFKPRVHIQGEDMRPL 72

Query: 63  FTLIMVDPDVPGPSDPYMREHLHWLVTDIPGTTDATF--GKELMSYEIPKPTIGIHRFVF 122
           FTL+MVDPDVPGPSDPY+REHLHWLVTDIPGTTDATF  GKE MSYEIPKPTIGIHRFVF
Sbjct: 73  FTLVMVDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGTGKEEMSYEIPKPTIGIHRFVF 132

Query: 123 VLFKQKRRRS-VNPPSSRDRFNTRRFSAENDLGLPVAAVYFNAQRETAARRR 171
           +LFKQK+RRS VNPPSSRDRFNTRRFS ENDLGLPVAAVYFNAQRETAARRR
Sbjct: 133 ILFKQKQRRSVVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR 184

The following BLAST results are available for this feature:

BLAST of CmaCh03G011600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TFL1_ARATH	6.9e-68	70.24	Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1	[more]
CET2_TOBAC	5.8e-67	70.24	CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1	[more]
CET4_TOBAC	1.7e-66	69.64	CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1	[more]
SELFP_SOLLC	2.9e-66	68.05	Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1	[more]
CEN_ARATH	8.4e-66	68.02	Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1	[more]

BLAST of CmaCh03G011600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFB9_CUCSA	1.5e-82	90.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452100 PE=4 SV=1	[more]
B9ZYL1_CUCSA	7.6e-82	90.00	TFL1-like protein OS=Cucumis sativus GN=CsTFL1a PE=2 SV=1	[more]
B0ZT31_PONTR	2.6e-74	79.04	CTRSTFL-like protein OS=Poncirus trifoliata PE=2 SV=1	[more]
V4T1S3_9ROSI	2.6e-74	79.04	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013475mg PE=4 SV=1	[more]
A4GG72_VITVI	3.4e-74	77.25	TFL1B protein OS=Vitis vinifera GN=TFL1B PE=2 SV=1	[more]

BLAST of CmaCh03G011600 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03840.1	3.9e-69	70.24	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT2G27550.1	4.7e-67	68.02	centroradialis	[more]
AT5G62040.1	3.4e-57	63.31	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT1G65480.1	4.8e-51	54.82	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	1.4e-47	53.01	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

BLAST of CmaCh03G011600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125205\|ref\|XP_008462564.1\|	4.0e-84	91.72	PREDICTED: CEN-like protein 2 isoform X2 [Cucumis melo]	[more]
gi\|659125203\|ref\|XP_008462563.1\|	1.3e-82	90.64	PREDICTED: CEN-like protein 2 isoform X1 [Cucumis melo]	[more]
gi\|778717475\|ref\|XP_011657698.1\|	2.2e-82	90.59	PREDICTED: CEN-like protein 2 isoform X2 [Cucumis sativus]	[more]
gi\|224775505\|dbj\|BAH28254.1\|	1.1e-81	90.00	TFL1-like protein [Cucumis sativus]	[more]
gi\|778717472\|ref\|XP_011657697.1\|	7.1e-81	89.53	PREDICTED: CEN-like protein 2 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001858	Phosphotidylethanolamine-bd_CS
IPR008914	PEBP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090344	negative regulation of cell aging
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:1903506	regulation of nucleic acid-templated transcription
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009744	response to sucrose
biological_process	GO:0048510	regulation of timing of transition from vegetative to reproductive phase
biological_process	GO:0010229	inflorescence development
biological_process	GO:0009910	negative regulation of flower development
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0031982	vesicle
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003712	transcription cofactor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G011600.1	CmaCh03G011600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 62..84 scor
IPR008914	Phosphatidylethanolamine-binding protein	GENE3D	G3DSA:3.90.280.10		coord: 3..166 score: 1.4
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 50..159 score: 1.9
IPR008914	Phosphatidylethanolamine-binding protein	unknown	SSF49777	PEBP-like	coord: 10..164 score: 1.03
None	No IPR available	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 4..170 score: 1.6E
None	No IPR available	PANTHER	PTHR11362:SF13	PROTEIN TERMINAL FLOWER 1	coord: 4..170 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G011600	Cucsa.083330	Cucumber (Gy14) v1	cgycmaB0153
CmaCh03G011600	Cucsa.241060	Cucumber (Gy14) v1	cgycmaB0680
CmaCh03G011600	Cla008648	Watermelon (97103) v1	cmawmB645
CmaCh03G011600	Cla017699	Watermelon (97103) v1	cmawmB612
CmaCh03G011600	Cla018392	Watermelon (97103) v1	cmawmB639
CmaCh03G011600	Csa6G452100	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G011600	Csa3G776350	Cucumber (Chinese Long) v2	cmacuB659
CmaCh03G011600	MELO3C009465	Melon (DHL92) v3.5.1	cmameB600
CmaCh03G011600	MELO3C024540	Melon (DHL92) v3.5.1	cmameB609
CmaCh03G011600	ClCG02G022150	Watermelon (Charleston Gray)	cmawcgB582
CmaCh03G011600	ClCG10G019050	Watermelon (Charleston Gray)	cmawcgB570
CmaCh03G011600	ClCG04G009990	Watermelon (Charleston Gray)	cmawcgB590
CmaCh03G011600	CSPI03G34820	Wild cucumber (PI 183967)	cmacpiB667
CmaCh03G011600	CSPI06G25440	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G011600	CmoCh03G011500	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G011600	CmoCh14G002940	Cucurbita moschata (Rifu)	cmacmoB640
CmaCh03G011600	Lsi03G019030	Bottle gourd (USVL1VR-Ls)	cmalsiB609
CmaCh03G011600	Lsi10G011650	Bottle gourd (USVL1VR-Ls)	cmalsiB594
CmaCh03G011600	Lsi01G012270	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G011600	Cp4.1LG19g05100	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G011600	Cp4.1LG03g00860	Cucurbita pepo (Zucchini)	cmacpeB681
CmaCh03G011600	Cp4.1LG10g04120	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G011600	MELO3C009465.2	Melon (DHL92) v3.6.1	cmamedB684
CmaCh03G011600	MELO3C024540.2	Melon (DHL92) v3.6.1	cmamedB695
CmaCh03G011600	CsaV3_3G037190	Cucumber (Chinese Long) v3	cmacucB0788
CmaCh03G011600	Cla97C04G076830	Watermelon (97103) v2	cmawmbB689
CmaCh03G011600	Cla97C02G048220	Watermelon (97103) v2	cmawmbB680
CmaCh03G011600	Cla97C10G202080	Watermelon (97103) v2	cmawmbB671
CmaCh03G011600	Bhi03G001425	Wax gourd	cmawgoB0792
CmaCh03G011600	Bhi11G001635	Wax gourd	cmawgoB0771
CmaCh03G011600	CsGy6G024900	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G011600	CsGy3G032260	Cucumber (Gy14) v2	cgybcmaB406
CmaCh03G011600	Carg10475	Silver-seed gourd	carcmaB0333
CmaCh03G011600	Carg05368	Silver-seed gourd	carcmaB1125

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G011600	CmaCh14G003030	Cucurbita maxima (Rimu)	cmacmaB269
CmaCh03G011600	CmaCh07G008560	Cucurbita maxima (Rimu)	cmacmaB523

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G011600	Silver-seed gourd	carcmaB0348
CmaCh03G011600	Silver-seed gourd	carcmaB1269
CmaCh03G011600	Cucumber (Chinese Long) v3	cmacucB0810
CmaCh03G011600	Cucurbita maxima (Rimu)	cmacmaB498
CmaCh03G011600	Cucurbita maxima (Rimu)	cmacmaB521
CmaCh03G011600	Cucurbita moschata (Rifu)	cmacmoB651
CmaCh03G011600	Cucurbita moschata (Rifu)	cmacmoB665
CmaCh03G011600	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G011600	Cucurbita pepo (Zucchini)	cmacpeB689