Carg05368 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAATGGCAAGATCAAAAATATCAGAGCCTCTGGTTCTAGGAAGAGTGATAGGAGATGTGGTGGATTCCTTCACCCCATCCATTAAAATGTGTATCACTTTCAGCAACAAGCACGTCCTCAATGGCTATCAATTCTTCCCTTCTTCTCTCTCCTTCAAACCCAGAGTTCATGTTTCAGGAGAAGATATGAGATCTTTGTTCACTTTGGTACACTCAAATCCTTCAAAATTCTCTCTTTTAACAAACCCTTTGTTCAATTTTTGATCTTTTGTTGTTGTTTTTTTCTTTTCTTTTTTTTTTTTTTGGTTAGATCATGGTTGATCCTGATGTTCCTGGCCCTAGTGATCCATTCTTGAGAGAACACCTCCACCGGTAAAAAAATATTACAAAATTTCCAAGTTTTGAGCTTTAAAGTTCGAAAAAAACGTAACTTTGATCAAAACCCATCATTTTTATCGTGTCTAAAATCATTTCCAGTACAAAATTTGCAAGTTTTGAGCTTTGAAGTTCGAAAAAAACTTAACTTTGATCAGAACCCGTCACTTTTGTCGGGTTTAAAATCATCTCTACTTATACAAAATGTTACAAAATTTGCAAGTTTTGAGCTTTAAAGTTGGAAGAAACGTAATTTTGATCAAAACCCATCATTTTTATCGGGTTTAAAATCATCTCCGGTACAAAACGTTACAAAATTTGTCAGTTTTGAGCTTTGAAGTTTGAAAAAAACGTAACTTTGATCAAAACCCATCACTTTTGTCGTGTTTAAAATCATCTCCACTTATACAAAATATTACGAGATTTGCAAGTTTTGAGCTTTAAAGTTCGAAAAAACGTAACTTTGATCGAAATCTATCATTTTTATCGTGTTTAAAATCACCGAGAAACATAATTTCGATATCGACCCCTAATTTTGGGTATCTTTTACAGGTTGGTGACTGACATTCCAGGAACTACTGATGCCAACTTTGGTATAGCTTACTTTCTCTTTCTACTTGAAGAGAGAGAAAGGCAGAGATTTTGGTTTAAAGATGTTTTTTTTTTTAATGACAGGAAGAGAAGAAGTGAGCTATGAAATCCCAAAACCGACAATAGGAATACACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACATCGTTGTTCGGTAAACTCTCCATCTTCAAGGGATCACTTCAACACTCGAAGATTTGCAGCTGAGAATGATTTGGGTCTTCCTGTTGCAGCTGTTTATTTCAATGCACAAAGAGGAACTGCTGCTTCGAGCAGGCGATGATGATTTGATCCAAAAAGTTCATAAAAAACCCATCTTTTAGAAATGGGTTTTGCCTTTTCTTCTTCTTTTTTACTGTTTGTTTGTGTGTTTTTAAGGGTTAGTTTTGTGAGTTTTGTTGGCTTTTTAAGTAGTTTTTGGAGCGTGTAGGTGAGTTTGTTGTATATAGAGTGAGTGAGTGAGTTTGGAATATGTGTACTCGTTCC TAAAATGGCAAGATCAAAAATATCAGAGCCTCTGGTTCTAGGAAGAGTGATAGGAGATGTGGTGGATTCCTTCACCCCATCCATTAAAATGTGTATCACTTTCAGCAACAAGCACGTCCTCAATGGCTATCAATTCTTCCCTTCTTCTCTCTCCTTCAAACCCAGAGTTCATGTTTCAGGAGAAGATATGAGATCTTTGTTCACTTTGATCATGGTTGATCCTGATGTTCCTGGCCCTAGTGATCCATTCTTGAGAGAACACCTCCACCGGTTGGTGACTGACATTCCAGGAACTACTGATGCCAACTTTGGAAGAGAAGAAGTGAGCTATGAAATCCCAAAACCGACAATAGGAATACACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACATCGTTGTTCGGTAAACTCTCCATCTTCAAGGGATCACTTCAACACTCGAAGATTTGCAGCTGAGAATGATTTGGGTCTTCCTGTTGCAGCTGTTTATTTCAATGCACAAAGAGGAACTGCTGCTTCGAGCAGGCGATGATGATTTGATCCAAAAAGTTCATAAAAAACCCATCTTTTAGAAATGGGTTTTGCCTTTTCTTCTTCTTTTTTACTGTTTGTTTGTGTGTTTTTAAGGGTTAGTTTTGTGAGTTTTGTTGGCTTTTTAAGTAGTTTTTGGAGCGTGTAGGTGAGTTTGTTGTATATAGAGTGAGTGAGTGAGTTTGGAATATGTGTACTCGTTCC ATGGCAAGATCAAAAATATCAGAGCCTCTGGTTCTAGGAAGAGTGATAGGAGATGTGGTGGATTCCTTCACCCCATCCATTAAAATGTGTATCACTTTCAGCAACAAGCACGTCCTCAATGGCTATCAATTCTTCCCTTCTTCTCTCTCCTTCAAACCCAGAGTTCATGTTTCAGGAGAAGATATGAGATCTTTGTTCACTTTGATCATGGTTGATCCTGATGTTCCTGGCCCTAGTGATCCATTCTTGAGAGAACACCTCCACCGGTTGGTGACTGACATTCCAGGAACTACTGATGCCAACTTTGGAAGAGAAGAAGTGAGCTATGAAATCCCAAAACCGACAATAGGAATACACAGGTTTGTGTTTGTTCTGTTCAAACAAAAACATCGTTGTTCGGTAAACTCTCCATCTTCAAGGGATCACTTCAACACTCGAAGATTTGCAGCTGAGAATGATTTGGGTCTTCCTGTTGCAGCTGTTTATTTCAATGCACAAAGAGGAACTGCTGCTTCGAGCAGGCGATGA MARSKISEPLVLGRVIGDVVDSFTPSIKMCITFSNKHVLNGYQFFPSSLSFKPRVHVSGEDMRSLFTLIMVDPDVPGPSDPFLREHLHRLVTDIPGTTDANFGREEVSYEIPKPTIGIHRFVFVLFKQKHRCSVNSPSSRDHFNTRRFAAENDLGLPVAAVYFNAQRGTAASSRR
BLAST of Carg05368 vs. NCBI nr
Match: XP_022963124.1 (CEN-like protein 2 [Cucurbita moschata]) HSP 1 Score: 350.1 bits (897), Expect = 4.3e-93 Identity = 172/175 (98.29%), Postives = 172/175 (98.29%), Query Frame = 0
BLAST of Carg05368 vs. NCBI nr
Match: XP_022972799.1 (protein TERMINAL FLOWER 1-like [Cucurbita maxima]) HSP 1 Score: 340.5 bits (872), Expect = 3.4e-90 Identity = 165/174 (94.83%), Postives = 169/174 (97.13%), Query Frame = 0
BLAST of Carg05368 vs. NCBI nr
Match: XP_023518454.1 (protein TERMINAL FLOWER 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 337.0 bits (863), Expect = 3.7e-89 Identity = 170/181 (93.92%), Postives = 170/181 (93.92%), Query Frame = 0
BLAST of Carg05368 vs. NCBI nr
Match: XP_022978007.1 (protein TERMINAL FLOWER 1-like [Cucurbita maxima]) HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76 Identity = 143/174 (82.18%), Postives = 153/174 (87.93%), Query Frame = 0
BLAST of Carg05368 vs. NCBI nr
Match: XP_023545007.1 (protein TERMINAL FLOWER 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290.4 bits (742), Expect = 4.0e-75 Identity = 140/174 (80.46%), Postives = 151/174 (86.78%), Query Frame = 0
BLAST of Carg05368 vs. TAIR10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 246.5 bits (628), Expect = 1.2e-65 Identity = 115/173 (66.47%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Carg05368 vs. TAIR10
Match: AT2G27550.1 (centroradialis) HSP 1 Score: 233.8 bits (595), Expect = 8.1e-62 Identity = 112/170 (65.88%), Postives = 138/170 (81.18%), Query Frame = 0
BLAST of Carg05368 vs. TAIR10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 205.7 bits (522), Expect = 2.4e-53 Identity = 102/173 (58.96%), Postives = 129/173 (74.57%), Query Frame = 0
BLAST of Carg05368 vs. TAIR10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 194.9 bits (494), Expect = 4.2e-50 Identity = 92/170 (54.12%), Postives = 118/170 (69.41%), Query Frame = 0
BLAST of Carg05368 vs. TAIR10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 181.4 bits (459), Expect = 4.8e-46 Identity = 88/168 (52.38%), Postives = 111/168 (66.07%), Query Frame = 0
BLAST of Carg05368 vs. Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.0e-65 Identity = 119/173 (68.79%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of Carg05368 vs. Swiss-Prot
Match: sp|Q9XH42|CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 5.7e-65 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of Carg05368 vs. Swiss-Prot
Match: sp|O82088|SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.7e-64 Identity = 117/173 (67.63%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Carg05368 vs. Swiss-Prot
Match: sp|P93003|TFL1_ARATH (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.2e-64 Identity = 115/173 (66.47%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Carg05368 vs. Swiss-Prot
Match: sp|Q9XH44|CET1_TOBAC (CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 5.0e-61 Identity = 110/172 (63.95%), Postives = 139/172 (80.81%), Query Frame = 0
BLAST of Carg05368 vs. TrEMBL
Match: tr|A0A1S3CHR2|A0A1S3CHR2_CUCME (CEN-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500893 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.0e-74 Identity = 138/171 (80.70%), Postives = 153/171 (89.47%), Query Frame = 0
BLAST of Carg05368 vs. TrEMBL
Match: tr|A0A0A0KFB9|A0A0A0KFB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452100 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.9e-73 Identity = 138/172 (80.23%), Postives = 153/172 (88.95%), Query Frame = 0
BLAST of Carg05368 vs. TrEMBL
Match: tr|A0A1S3CH72|A0A1S3CH72_CUCME (CEN-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500893 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 3.2e-73 Identity = 138/173 (79.77%), Postives = 153/173 (88.44%), Query Frame = 0
BLAST of Carg05368 vs. TrEMBL
Match: tr|B9ZYL1|B9ZYL1_CUCSA (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1a PE=2 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 9.4e-73 Identity = 137/172 (79.65%), Postives = 152/172 (88.37%), Query Frame = 0
BLAST of Carg05368 vs. TrEMBL
Match: tr|A0A2P4MPY5|A0A2P4MPY5_QUESU (Cen-like protein 2 OS=Quercus suber OX=58331 GN=CFP56_65255 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.7e-72 Identity = 133/171 (77.78%), Postives = 150/171 (87.72%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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