CmaCh03G007890 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G007890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Cma_Chr03 : 6088094 .. 6091549 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTAAAGAAGCAGAAGTTGGTAGACATTTTCCTAATACCGTTCATTTTGAAATATTGATTGTTGTTGGTAGATCACCTTAATGAATATATTTTGCTCACCTTCATGACCAAGTCCAGCCTTGTCAAGTGATTGTTAATCAACCTTTCATTGTTTAAGAGATTAACTTACATTTTGGCATTATTATCTCTTTTTTCTTTGCAGCAGCATTACTGAAATTTCATTTTTTATCACACGCATAACTATAGTTTAGGGTCATCAACGAAATAAAGAATATTACTACTCTTGGGCGGTATTTATATCTGCCTATGCCTGTAATATAAGCCTAGTATTTACAGTCTCATTTTTATTCTCTTAGACCGGTCCTATGCTTATCTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAATTCCTATAGTTATCATCGAGTTACATTTGATCATTCGTGATTAAAATTGCAGGAAGGGTTTGCTTTTGCTCATTGTACCACATGTAAGGCCCCTTACCACTTGAGAGTACATGCTGTTGCTGACAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTGTATTTATATTTTTGGCGGTTCAGCTTGTAAGTTTTATGTTTTCTATTCAATTTGTTGCAAATCAATTTATGTTCTAGCAGTTGATTATACTTGTGTGTAATATTTATCTTTGTGCAGGTAATTGCTTCTCTGGGATATTTGACGCATTTTGTAGATGGTTTTCAACATTACTGGCTTCGTCTTACGTGGGGTTTTGATAACAAAATTAGTTTTTATTACATATGTGGTAAAATCTCAATAAGCTGATTCAAGATTTGCATGCATAATTTATGTTATAACAGTAGGGCGTAAGCTTGTTTGGCTTCAGGCAGTTTGGCTTAGTCGCCTTGTTTGCTGGTCTGTTTGGAGTGCCTCTGACTTTGAACTGTTCTCATCAAAAGAACTTTTAGCAGAAGATCGTCGATGACAAAAAATAATCTACTTGTTTAATTCTGACATTTTAAGTACTTTTACTTTAGTTAGAACGAGGTCCCTTTATTCTTTCTTTAATTAGTATTTTAAGAATTGATAAGCTACCAGAAGGGATGTATCTAAAGTTGCAAAAAAATATGATACGCAAGAAGAATTGTTGAGAGAGGTTACGTCTGTATAGAGAAGTTAACGGCGAGAGGAAGTATGAGCTGGATGGGTGTTGGGAGTATGGAAAAAAGGTTAGTGAGATAAAGTCTGGCGATAGAAGGGAAAGTTCTATTTTTTTCGTTTCATAGAAACTAATGAAAGTGTGAGGGTACAGAACAACAGCTTAAAAGAATGTTCTCATTACATGATCGCATGTTTTGATTCATGTTGTTGAACCCCATAAGAAGGAAGTATTGAATGGTTTATGGCCTTTTACTGTAATCATAATAACAGTTTTATATTTTATCTACTTGAACATCGCCTATAAATTTTATTTCTATGCAGGAGCTTTATTATTTTTTGCATTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAGCCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCAGGGTATAAATCTATTGTTTCACAGTTTCTTTTGGCTTTATGTTCAAAATTATTATTTCCTTATCATAAAAATTCTTGTTGAGGAGTTTAGGCTCGTTCTTTAAGGTATGACTCATGCAGTGATGTTTCTCTAACTCAACTGATTTTTCTCTGTTCTGCTTCCCGTCCAATTGTAATTGAAAGAATATTGATGAACCGTAGTATAGAATATTTGACATTTAGCCAAGCTGGGAATTCATTCAAGCTTTGTTAGAATAATGACAAAATACCTTGTCCAAGTTCTTTATATCTTTCTCCATCAAATTATAGAGTTTAAATGTTGGAAATGTTTTGCAAAAATAGTACTTTTAGGTTATTCAGCATTCTCGTGTTTTTTATGTGTTTTCTTATATCTTTGCAGACTATGTGCTGACTGTCATTTGCCTGGTACTCTTTGTATGTGGACTGACTGCACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTATTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTCATTGGTATCTTCTACAGCGTCTTGGTAGCTACCATGGTTGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGCTTACAAAGGTGAGTTGGCTGATCTCTTTTGAGCTGCGTATGCGCATAACTGTCAATGATGCACTGATCTAGGAGGGTAAATACTTGAATATGGCTTCTTTTTTTTTTCTATATAATAGACTAACTGTTGAAATAAACAGAACCAACTGGATTAGGGTGAGTTTGAGATATCATTTTGAAAAAGTGTTCTAAAGTGGAGCTTTTATTTTGTAAGCAAAAGTGATTAAACGTTTCATCTAAAAGCTCTTTAAGCGCCTTTTATCTACTTTTAGAAATTTTCAAACTACTTTGATTACCAAAAAAATTAAAAGTGTTCTGCATTGGTCAGAACAAAAGTGCTCTTAAAATTTTTGCTAAACCCTATCCAATTAGAAGGGGAAAAAAAAAAATCTATTCGTCTTCCAAACACGTCCCTCAAAAAGGAATGCAAAGTCAACATCATTGATGGAGGTGGGTGCCCCCAAGCACATTCATATTCATATTCATGAGGTCTGTCGTATTAATCAGTGGGTAGGATAATGTTGGACATGACCTTCATCTTTTGGGGAAGAAAGGATAACGGGAGTGTGGGGGACACTAATGGTTCAATATCAAATACTATATTCTGATGGTTGGTTTGATTATGAATCTGCTGTGTTTTTTTTTTTTTTAGGTCCAACCATTCCAGGGTTGGTGATTGAACATCTACCTTTCGATTATAATAATTGCTTTCTTATCCACTATGGTCTCGATTGTGTTTGGGACCATAAATGCTCATTTCTTAATACGTTTTGATTCCTCTCAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCGGAGTGGTTACCTCCACCACTTCCAGCTGAGCACGTTCAACAACTGAAAAATCTTGGCCTTTTATGAAATGAAATGGGTCACTCTTCATATTCCCCCGGAAGAGTATATCTGTTCAAAGCCTGAACTGACCATAATGCTTTTGCTTCTCACTTGCAGATCTTTAATTCGGACCAAGAAAGTCCCATACGTATACACATAATACTTAGCCTCTGCATTTCGTCTGTATGGTTAGACTGCCTAGTTTTTATCTTTTCAGTGTGAGAAAATGGCAACGAATTTGAATACCCACAGTGAAAACTGACAGTCTAAAGCTATATTAAAGTGTTTTTGTGAATTGACT

mRNA sequence

ATGTTGGAAGGGTTTGCTTTTGCTCATTGTACCACATGTAAGGCCCCTTACCACTTGAGAGTACATGCTGTTGCTGACAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTGTATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGACGCATTTTGTAGATGGTTTTCAACATTACTGGCTTCGTCTTACGTGGGGTTTTGATAACAAAATTAGTTTTTATTACATATGTGGAGCTTTATTATTTTTTGCATTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAGCCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCAGGACTATGTGCTGACTGTCATTTGCCTGGTACTCTTTGTATGTGGACTGACTGCACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTATTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTCATTGGTATCTTCTACAGCGTCTTGGTAGCTACCATGGTTGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGCTTACAAAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCGGAGTGGTTACCTCCACCACTTCCAGCTGAGCACGTTCAACAACTGAAAAATCTTGGCCTTTTATGAAATGAAATGGGTCACTCTTCATATTCCCCCGGAAGAGTATATCTGTTCAAAGCCTGAACTGACCATAATGCTTTTGCTTCTCACTTGCAGATCTTTAATTCGGACCAAGAAAGTCCCATACGTATACACATAATACTTAGCCTCTGCATTTCGTCTGTATGGTTAGACTGCCTAGTTTTTATCTTTTCAGTGTGAGAAAATGGCAACGAATTTGAATACCCACAGTGAAAACTGACAGTCTAAAGCTATATTAAAGTGTTTTTGTGAATTGACT

Coding sequence (CDS)

ATGTTGGAAGGGTTTGCTTTTGCTCATTGTACCACATGTAAGGCCCCTTACCACTTGAGAGTACATGCTGTTGCTGACAGGAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTGTATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGACGCATTTTGTAGATGGTTTTCAACATTACTGGCTTCGTCTTACGTGGGGTTTTGATAACAAAATTAGTTTTTATTACATATGTGGAGCTTTATTATTTTTTGCATTGCTCGGCTTATCTGGATGCTTCATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAGCCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCAGGACTATGTGCTGACTGTCATTTGCCTGGTACTCTTTGTATGTGGACTGACTGCACCACTTGCTTCGAAAGTTGTGGAAGCATAGCAACCGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTATTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTCATTGGTATCTTCTACAGCGTCTTGGTAGCTACCATGGTTGGACAACGAATATGGCAACGACACTATCACATACTTGCAAAAAGAATGCTTACAAAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCGGAGTGGTTACCTCCACCACTTCCAGCTGAGCACGTTCAACAACTGAAAAATCTTGGCCTTTTATGA

Protein sequence

MLEGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHFVDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPAEHVQQLKNLGLL

Homology

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BLAST of CmaCh03G007890 vs. TrEMBL
Match: A0A0A0KGV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501240 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.7e-141
Identity = 241/252 (95.63%), Postives = 248/252 (98.41%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDI+FIFLAVQLVIASLGYLT+ 
Sbjct: 72  EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIIFIFLAVQLVIASLGYLTYL 131

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DG QHYWLRLTWGFD+KISFYYICGALLFFALLG+SGCFITCYDRRVR+DLAQPCRELC
Sbjct: 132 IDGCQHYWLRLTWGFDSKISFYYICGALLFFALLGVSGCFITCYDRRVRSDLAQPCRELC 191

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLL IMALIVL
Sbjct: 192 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLLIMALIVL 251

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+WLPPPLPA
Sbjct: 252 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWLPPPLPA 311

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 312 EHVQQLKTLGLL 323

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BLAST of CmaCh03G007890 vs. TrEMBL
Match: D7SW29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01280 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 6.8e-135
Identity = 231/252 (91.67%), Postives = 239/252 (94.84%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH VADRKWRTLKFRFFVTRDI+FIFLAVQLVIAS  YL + 
Sbjct: 71  EGFAFAHCTTCKAPYHLRVHVVADRKWRTLKFRFFVTRDIIFIFLAVQLVIASFAYLVYL 130

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DGFQ +WLRL WGFD++ISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC
Sbjct: 131 IDGFQQFWLRLAWGFDSEISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 190

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCC PG+CADCHLPGTLCMWTDCTTCFESC S A ECGCLGGAGEAGLPLLFIMALIVL
Sbjct: 191 LCCCQPGMCADCHLPGTLCMWTDCTTCFESCASTAGECGCLGGAGEAGLPLLFIMALIVL 250

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEW PPPLP+
Sbjct: 251 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPPLPS 310

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 311 EHVQQLKALGLL 322

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BLAST of CmaCh03G007890 vs. TrEMBL
Match: A0A059ALX8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00344 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.2e-133
Identity = 226/252 (89.68%), Postives = 236/252 (93.65%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH VADRKWRTLKFRFFVTRDI+FIFLAVQLVI SL YL + 
Sbjct: 72  EGFAFAHCTTCKAPYHLRVHVVADRKWRTLKFRFFVTRDIIFIFLAVQLVITSLAYLVYL 131

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DG+Q +WLR  WGFD  +SFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC
Sbjct: 132 MDGYQQFWLRHAWGFDTGVSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 191

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCCHPG+CADCHLPGTLCMWTDCTTCFESC S A ECGCLGGAGEAGLPLLFIMAL++L
Sbjct: 192 LCCCHPGICADCHLPGTLCMWTDCTTCFESCASSAAECGCLGGAGEAGLPLLFIMALVIL 251

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+W PPPLP 
Sbjct: 252 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPPLPP 311

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 312 EHVQQLKTLGLL 323

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BLAST of CmaCh03G007890 vs. TrEMBL
Match: A0A061DJT9_THECC (RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_001207 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 6.4e-133
Identity = 227/252 (90.08%), Postives = 236/252 (93.65%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH  ADRKWRTLKFRFFVTRDI+ IFLAVQLVIASL YL H 
Sbjct: 71  EGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILSIFLAVQLVIASLAYLVHL 130

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +D +Q  WLRL WGFD+++SFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC
Sbjct: 131 IDSYQQSWLRLAWGFDSELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 190

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCC PG+CADCHLPGTLCMWTDCTTCFESC S ATECGCLGGAGEAGLPLLFIMALIVL
Sbjct: 191 LCCCQPGMCADCHLPGTLCMWTDCTTCFESCASAATECGCLGGAGEAGLPLLFIMALIVL 250

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+W PPPLP 
Sbjct: 251 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPPLPP 310

Query: 243 EHVQQLKNLGLL 255
           EH+QQLK LGLL
Sbjct: 311 EHIQQLKTLGLL 322

[Close]

BLAST of CmaCh03G007890 vs. TrEMBL
Match: B9T6Q8_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0145120 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-132
Identity = 227/252 (90.08%), Postives = 236/252 (93.65%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH  ADRKWRTLKFRFFVTRDI FIFLAVQLVIASL YL + 
Sbjct: 70  EGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDIAFIFLAVQLVIASLAYLVYL 129

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +D +Q  WLR TWGFDN++SFYYICGALLFFALLGLSGCFITCYDRRVR+DLAQPCRELC
Sbjct: 130 IDSYQQSWLRHTWGFDNELSFYYICGALLFFALLGLSGCFITCYDRRVRSDLAQPCRELC 189

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCC PG+CADCHLPGTLCMWTDCTTCFESC S A ECGCLGGAGEAGLPLLFIMAL+VL
Sbjct: 190 LCCCQPGMCADCHLPGTLCMWTDCTTCFESCASAAGECGCLGGAGEAGLPLLFIMALVVL 249

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+W PPPLP 
Sbjct: 250 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPPLPP 309

Query: 243 EHVQQLKNLGLL 255
           EHVQQLKNLGLL
Sbjct: 310 EHVQQLKNLGLL 321

[Close]

BLAST of CmaCh03G007890 vs. TAIR10
Match: AT2G22120.2 (AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 445.7 bits (1145), Expect = 2.0e-125
Identity = 209/253 (82.61%), Postives = 227/253 (89.72%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPY+LRVH+  DRKWRTLKFRFFVTRDI+ IFLAVQLVIA+L Y+ +F
Sbjct: 72  EGFAFAHCTTCKAPYYLRVHSAGDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYF 131

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +D +Q  WLR  WGFD++++FYY+CGALLFFALLGLSGC ITCYDRRVRNDLAQPCRELC
Sbjct: 132 IDSYQQSWLRHIWGFDSEVTFYYMCGALLFFALLGLSGCVITCYDRRVRNDLAQPCRELC 191

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATEC-GCLGGAGEAGLPLLFIMALIV 182
           LCCC PG+C DCHLPGT+CMW DCT C E C S  +EC GCLGGAGEAGLPLLFI AL++
Sbjct: 192 LCCCQPGICTDCHLPGTICMWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVI 251

Query: 183 LGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLP 242
           LGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEW PP LP
Sbjct: 252 LGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALP 311

Query: 243 AEHVQQLKNLGLL 255
            EHVQQLK LGLL
Sbjct: 312 TEHVQQLKTLGLL 324

[Close]

BLAST of CmaCh03G007890 vs. TAIR10
Match: AT1G11020.1 (AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-33
Identity = 103/261 (39.46%), Postives = 129/261 (49.43%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVAD-RKW-RTLKFRFFVTRDIVFIFLAVQLVIASLGYLT 62
           EGFAF+HCTTCKA +HLRV    D   W R  KFR FV RD++ +FLAVQ VIA +    
Sbjct: 104 EGFAFSHCTTCKAQFHLRVEPFEDNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFA 163

Query: 63  HFVD-------GFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRND 122
           + +D        F   W R+     + I FYY  G + FF L G  G  + C      ND
Sbjct: 164 YMMDKDGEFRNSFNDDWDRIL--SKHPIPFYYCIGVISFFVLTGFLGIILHC-SALNGND 223

Query: 123 LAQPCRELCLCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPL 182
              P    C  CC+     DC  P ++        CF                    L +
Sbjct: 224 ---PRMAGCQNCCYGWGVLDC-FPASM------EACF-------------------ALVV 283

Query: 183 LFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS 242
           +F++      +F ++G+ Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G  T  
Sbjct: 284 VFVV------IFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYT-- 321

Query: 243 EWLPPPLPAEHVQQLKNLGLL 255
              PP L AEH  +LK L LL
Sbjct: 344 ---PPKLDAEHEGRLKMLKLL 321

[Close]

BLAST of CmaCh03G007890 vs. TAIR10
Match: AT1G50440.1 (AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-12
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAF+HCT C+A + LR +  ADR W  L+F+  V RD  FIF++VQ+++A LG L + 
Sbjct: 101 EGFAFSHCTECRAFFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYK 160

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGL 99
             G +   LR  +G++     +Y   A+L   L+GL
Sbjct: 161 FYGEE---LREMFGYEEHPYGFYTL-AVLAIVLVGL 192

[Close]

BLAST of CmaCh03G007890 vs. NCBI nr
Match: gi|659080174|ref|XP_008440650.1| (PREDICTED: uncharacterized protein LOC103485004 [Cucumis melo])

HSP 1 Score: 511.1 bits (1315), Expect = 1.1e-141
Identity = 242/252 (96.03%), Postives = 249/252 (98.81%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDI+FIFLAVQLVIASLGYLT+F
Sbjct: 72  EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIIFIFLAVQLVIASLGYLTYF 131

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DG QHYWLRLTWGFD++ISFYYICGALLFFALLG+SGCFITCYDRRVR+DLAQPCRELC
Sbjct: 132 IDGCQHYWLRLTWGFDSRISFYYICGALLFFALLGVSGCFITCYDRRVRSDLAQPCRELC 191

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLL IMALIVL
Sbjct: 192 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLLIMALIVL 251

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA
Sbjct: 252 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 311

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 312 EHVQQLKTLGLL 323

[Close]

BLAST of CmaCh03G007890 vs. NCBI nr
Match: gi|449451475|ref|XP_004143487.1| (PREDICTED: uncharacterized protein LOC101214008 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 5.4e-141
Identity = 241/252 (95.63%), Postives = 248/252 (98.41%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDI+FIFLAVQLVIASLGYLT+ 
Sbjct: 72  EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIIFIFLAVQLVIASLGYLTYL 131

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DG QHYWLRLTWGFD+KISFYYICGALLFFALLG+SGCFITCYDRRVR+DLAQPCRELC
Sbjct: 132 IDGCQHYWLRLTWGFDSKISFYYICGALLFFALLGVSGCFITCYDRRVRSDLAQPCRELC 191

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLL IMALIVL
Sbjct: 192 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLLIMALIVL 251

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+WLPPPLPA
Sbjct: 252 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWLPPPLPA 311

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 312 EHVQQLKTLGLL 323

[Close]

BLAST of CmaCh03G007890 vs. NCBI nr
Match: gi|225438613|ref|XP_002280917.1| (PREDICTED: uncharacterized protein LOC100266317 [Vitis vinifera])

HSP 1 Score: 488.0 bits (1255), Expect = 9.8e-135
Identity = 231/252 (91.67%), Postives = 239/252 (94.84%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH VADRKWRTLKFRFFVTRDI+FIFLAVQLVIAS  YL + 
Sbjct: 71  EGFAFAHCTTCKAPYHLRVHVVADRKWRTLKFRFFVTRDIIFIFLAVQLVIASFAYLVYL 130

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DGFQ +WLRL WGFD++ISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC
Sbjct: 131 IDGFQQFWLRLAWGFDSEISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 190

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCC PG+CADCHLPGTLCMWTDCTTCFESC S A ECGCLGGAGEAGLPLLFIMALIVL
Sbjct: 191 LCCCQPGMCADCHLPGTLCMWTDCTTCFESCASTAGECGCLGGAGEAGLPLLFIMALIVL 250

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEW PPPLP+
Sbjct: 251 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPPLPS 310

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 311 EHVQQLKALGLL 322

[Close]

BLAST of CmaCh03G007890 vs. NCBI nr
Match: gi|702459601|ref|XP_010027788.1| (PREDICTED: uncharacterized protein LOC104418215 [Eucalyptus grandis])

HSP 1 Score: 483.0 bits (1242), Expect = 3.1e-133
Identity = 226/252 (89.68%), Postives = 236/252 (93.65%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH VADRKWRTLKFRFFVTRDI+FIFLAVQLVI SL YL + 
Sbjct: 72  EGFAFAHCTTCKAPYHLRVHVVADRKWRTLKFRFFVTRDIIFIFLAVQLVITSLAYLVYL 131

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +DG+Q +WLR  WGFD  +SFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC
Sbjct: 132 MDGYQQFWLRHAWGFDTGVSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 191

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCCHPG+CADCHLPGTLCMWTDCTTCFESC S A ECGCLGGAGEAGLPLLFIMAL++L
Sbjct: 192 LCCCHPGICADCHLPGTLCMWTDCTTCFESCASSAAECGCLGGAGEAGLPLLFIMALVIL 251

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+W PPPLP 
Sbjct: 252 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPPLPP 311

Query: 243 EHVQQLKNLGLL 255
           EHVQQLK LGLL
Sbjct: 312 EHVQQLKTLGLL 323

[Close]

BLAST of CmaCh03G007890 vs. NCBI nr
Match: gi|590707670|ref|XP_007048069.1| (RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao])

HSP 1 Score: 481.5 bits (1238), Expect = 9.2e-133
Identity = 227/252 (90.08%), Postives = 236/252 (93.65%), Query Frame = 1


Query: 3   EGFAFAHCTTCKAPYHLRVHAVADRKWRTLKFRFFVTRDIVFIFLAVQLVIASLGYLTHF 62
           EGFAFAHCTTCKAPYHLRVH  ADRKWRTLKFRFFVTRDI+ IFLAVQLVIASL YL H 
Sbjct: 71  EGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILSIFLAVQLVIASLAYLVHL 130

Query: 63  VDGFQHYWLRLTWGFDNKISFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 122
           +D +Q  WLRL WGFD+++SFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC
Sbjct: 131 IDSYQQSWLRLAWGFDSELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELC 190

Query: 123 LCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSIATECGCLGGAGEAGLPLLFIMALIVL 182
           LCCC PG+CADCHLPGTLCMWTDCTTCFESC S ATECGCLGGAGEAGLPLLFIMALIVL
Sbjct: 191 LCCCQPGMCADCHLPGTLCMWTDCTTCFESCASAATECGCLGGAGEAGLPLLFIMALIVL 250

Query: 183 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWLPPPLPA 242
           GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGS+W PPPLP 
Sbjct: 251 GLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPPLPP 310

Query: 243 EHVQQLKNLGLL 255
           EH+QQLK LGLL
Sbjct: 311 EHIQQLKTLGLL 322

The following BLAST results are available for this feature:

BLAST of CmaCh03G007890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh03G007890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGV2_CUCSA	3.7e-141	95.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501240 PE=4 SV=1	[more]
D7SW29_VITVI	6.8e-135	91.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01280 PE=4 SV=...	[more]
A0A059ALX8_EUCGR	2.2e-133	89.68	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00344 PE=4 SV=1	[more]
A0A061DJT9_THECC	6.4e-133	90.08	RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_001207 P...	[more]
B9T6Q8_RICCO	1.1e-132	90.08	Protein binding protein, putative OS=Ricinus communis GN=RCOM_0145120 PE=4 SV=1	[more]

BLAST of CmaCh03G007890 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22120.2	2.0e-125	82.61	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G11020.1	2.3e-33	39.46	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.1	2.9e-12	41.67	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of CmaCh03G007890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080174\|ref\|XP_008440650.1\|	1.1e-141	96.03	PREDICTED: uncharacterized protein LOC103485004 [Cucumis melo]	[more]
gi\|449451475\|ref\|XP_004143487.1\|	5.4e-141	95.63	PREDICTED: uncharacterized protein LOC101214008 [Cucumis sativus]	[more]
gi\|225438613\|ref\|XP_002280917.1\|	9.8e-135	91.67	PREDICTED: uncharacterized protein LOC100266317 [Vitis vinifera]	[more]
gi\|702459601\|ref\|XP_010027788.1\|	3.1e-133	89.68	PREDICTED: uncharacterized protein LOC104418215 [Eucalyptus grandis]	[more]
gi\|590707670\|ref\|XP_007048069.1\|	9.2e-133	90.08	RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G007890.1	CmaCh03G007890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23012:SF50	RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEIN	coord: 3..221 score: 5.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G007890	Cucsa.104700	Cucumber (Gy14) v1	cgycmaB0231
CmaCh03G007890	Cla014174	Watermelon (97103) v1	cmawmB632
CmaCh03G007890	Csa6G501240	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G007890	MELO3C007787	Melon (DHL92) v3.5.1	cmameB617
CmaCh03G007890	ClCG01G019090	Watermelon (Charleston Gray)	cmawcgB579
CmaCh03G007890	CSPI06G30550	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G007890	CmoCh03G008230	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G007890	Lsi01G007290	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G007890	Cp4.1LG10g01000	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G007890	MELO3C007787.2	Melon (DHL92) v3.6.1	cmamedB703
CmaCh03G007890	CsaV3_6G045770	Cucumber (Chinese Long) v3	cmacucB0809
CmaCh03G007890	Cla97C01G018550	Watermelon (97103) v2	cmawmbB670
CmaCh03G007890	Bhi03G000948	Wax gourd	cmawgoB0798
CmaCh03G007890	CsGy6G030030	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G007890	Carg00674	Silver-seed gourd	carcmaB0567

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G007890	Cucurbita maxima (Rimu)	cmacmaB523
CmaCh03G007890	Cucumber (Gy14) v1	cgycmaB0458
CmaCh03G007890	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G007890	Wild cucumber (PI 183967)	cmacpiB660
CmaCh03G007890	Cucumber (Chinese Long) v2	cmacuB652
CmaCh03G007890	Melon (DHL92) v3.5.1	cmameB597
CmaCh03G007890	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G007890	Cucumber (Gy14) v2	cgybcmaB237
CmaCh03G007890	Melon (DHL92) v3.6.1	cmamedB681
CmaCh03G007890	Silver-seed gourd	carcmaB1055
CmaCh03G007890	Silver-seed gourd	carcmaB1287
CmaCh03G007890	Cucumber (Chinese Long) v3	cmacucB0779