CSPI06G30550 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCTCCGGCGCCGATCACCGACCCTAGTGAGATCGACCTTGAAGCTGGTCAAGGGGAACAAATTCAGTGTAGAATTTGCCTTGAGACCGATGGTAATTCCTCGTTCCTATGTTTTTCAGTTTTTGTTAGGTTTCGACTGTTTTCGTACGGTTGGTGGGGTTGTTTTCGTTTGGGTATGTTCCACATTTTCCTTCCGGGAAATCATTGTGGAACCTAATTTCTTCTGCTTGCTTTATAATCAATGGCTCAGTGCAGCGTTTTAGGCGAAGTTCTTTGGACCCTAGAATCTTAATTTTCCGAAATTACGATGTGTTTTCTTATGATCATTGTTTCTTTCAATACCGTGAGACTTGAAGTCTAATTAATTAGGTTCTTCGGTGTTAAAAATTCGTTAATTTGATCGTTTGACAAGCGATGTTAACATTCCCCATCCACTTGGCCATTCGTGCTTTAGAATTCTTTGGAGTTGACTGTTCACTTGAAAGTTTGTATAACGGTAGGAGAGGGGGGTATCACACTGAGACTATGGGAGTATTTAAATTAACCAATGTGCGTGTTTCATTACATGATCAGGTAGGGATTTTATTGCTCCTTGCAAATGCAAAGGGACATCCAAATATGTTCATCGAGAATGTCTGGATCATTGGCGAGCCGTGAAGGTATGAATGCTATCTTGAATGCTGGTGGTTTCAATGTAAGTTTAGTTATTGTGATTGAATTTTCAAATGAAGTTGCTGATAATACACCCATGATTCCCTGAATTTGCATGGTTATATTTTCCTCACCTTAATGACTAAGTTCAGCCTTAACAAGTGATTGTTACGATACCTTTTATTGCTTAAGAAATTAACTCGTATTTTGCCATTATTAACTCTGTTCTCCTTGCACCAGCATTTTTTAAGTTTCAATTTTTATCACACGATTGACTCTAATTTAGGGTAATTAACAAAATAAAGAATATCACTACTCTTGGGCGGTATTTGTATCCGCCCGCACCAGTCATATTTACAGTCTCGTTTTTGTCTTCTTAGACTGGTTCTATGTTTATTTAGGAAAATAAATAAGGAAATTTCTATAGCCATCATTTAGTTACATTTGGTCATCCGTGATTAAAATTGCAGGAAGGGTTTGCTTTTGCTCACTGTACCACATGTAAGGCCCCTTACCATTTGAGAGTACATGCTGTTGCTGACAGAAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTATATTTATATTTTTGGCGGTTCAGCTTGTAAGTTTTATTTTGTTTCTATTTAATTTATTGCCAAACCAAGTTATGTTGTAGCATGAGATTATTTTTCTGTAGAATAGTTTATATTCCTTTGTTTATCTTTGTGCAGGTAATTGCTTCTCTGGGATATTTGACATACTTAATAGATGGTTGTCAACATTACTGGCTTCGTCTTACTTGGGGTTTTGATAGCAAAATTAGTTTTTATTACATATGCGGTAAAATCTCAATTGGCTGATTCAAGCTTTGCATGCACAATTTATGTTATAGCATTAGGGCATAATCTTGTTTGGCCCATAGCTTCAAGCAGTTTGTCTTAGTGACCTTGTTTGCTGGTCTGCTTAGAGCGCTTCTGACTTTTATGGGTTCACATCCAAAGAACTTTTAACATAAGAACTTTGATGATAAGTAATAATATATCGTTTGCTTATTTAATTCTAACTTTTTAAGTACTTTTGCGGTGTGCTTTAGTTAGAAAGGAGTGTCTTTTAAGTTTTAATTAAAAGTATATTAAGAATTGGTAAGCTACTAGTCGGGGTGTATCTAAAATTGTAAAAGTTGTGATAGTGAGAAGAATTGTTGAGAGGTTGTTTTTACTTTTTAGAAAGAAGTTGATGATGAGAGGAACTGTGTAGTAGAGGAGTGTAGAGACTAGAGAGACCAGGGTGAGATTATGTATGGAAAAAAAGCCTGTGAGATAAAGTGTGTAGAGAGATGGGAAATCTTTTGTGCTTCATAGAAATTAATGAAAACTAATGAAAGTTTGAGGGCAAAGAACAACAGCTGAAAAAAATGTGCTTATTACATTATCGCAATATTTTATTCATATTGTTGTTGAACCTCATAAGGAGGAAGTAGTTAATGGATTATGGTCCTTCACTGTATGAGTATTATATTGAGTCAACTTGAAATATGCAATATCAATTTGGTCCCTATAATTTAAATTTGGTTCAATTTTAGTCCTTGTACTTTTAAATGATCAATTTTTGTCTCAACTTTTTCAAGTAATCTATAATTTAGTCCCTCCTGCATGCTTATTAATGTTTTTTTAAAATAATTTTTTGATATTTCTTAGCATTTTCACTATAAATTTTGAAAATATATTCACATATCATATTTCTTTACGTGAAAGTTATTGTTATTATTTAGCCAATTTTGATTTTTTTAGAAAAATATTTAGCTTTGTACATGGGCAAAAATTGAATATTTGAAAGTATGTGGATTAAAGTTGAACAAACCTCAAAGTAGAGAGACAATTTTAATTTATTTTATTTCTTTATGTTAGATGCTATTCTGTTCTACAAAATCGAAAGACATATTTCAGTTCTTTCAATTCTGTTTTTACTAGTTTGCGTTATTTCCTATGCAGGGGCTTTATTATTTTTTGCATTGCTCGGCGTATCTGGCTGCTTCATCACTTGTTATGATCGAAGAGTTAGGAGTGATTTGGCTCAACCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCTGGGTATAAATCCATATTTTGCAGTTTCTTTTTTAATTATGTTAAAATTTTATTGTTTTCAAATTTTAACAATGCTTGTTGAGGAGCGTAGGCTCATTCTTTGGCATAACTGCTGCCATGCAGTGATGATTCTCTAACACGACTGATCTTTCTCTATTCTGCTTCCCGTCCCACTGTAGTGAAAGAATGTTGCTGGAAATATAGAATATTCAATATTTAGCCAAGCTAAGAATTCGTTCAAGCTATTTTAGATTGATGACTAAAATCCTTATCAAAGCTCGTTATATCTATCTTCATCAAATTATAATATATAAATGCTGGAAATATTTTCCAAACAATAGTATTTTTAGTTTATTCACCAGCATCATATTTTTATGTGTTTCTTGCATCTTTCCAGACTATGTGCAGACTGTCATTTACCTGGTACTCTTTGTATGTGGACCGACTGTACCACTTGCTTCGAAAGTTGTGGAAGCATTGCAACTGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTACTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTGATTGGTATATTCTATAGTGTCTTGGTGGCTACCATGGTTGGCCAACGAATATGGCAACGACACTATCACATACTTGCGAAAAGAATGCTAACAAAGGTGAGTTGATTGATCTCTTTTGAGATTTATTTGTGCATAACTTTCAAACTCTGAGCTAGGAGTGTAAATACTTGAATATGGTTTCTTTTTCTGTACACTAGACTGGCTATTGAAATAAACAGAACCAACTAAATTTGGGCGAGTCTGAGATTTCATTTTGAAAAATGTGTTCTTAAGTGAAGCATTTATTTTGTAAGCAAAACTAATGAAATGTTTCATCTAAAAGTACTTTTTTAAGTGCCTTTTATCTACTTTTACAAATTTTCAAACTGCGTGTGATTAAAGAAAAGTGTTTTAGATTAGAAGTACTCTTAAAAAATTTCAGTAAATCCCATGATTTAAAAGAGAGCAAAATTACTAGTCGTCCAAACACACCCCGTTAGAAAATGAAAATAAAAGCCAAACATCATGGATGAAGGTGGATGCCCAGCTGGCCGAGCACATCCATTCACGAGGGCTGTCTTATTGGTCTTTGGGATGAGAAAGATAACAGGAGTGGGGGACACTAAAACCAAATGACATATTCCCATGGATGGATTGATTGTGAATCGACCATTTTTGTAGGAGGTTGGAGGATCAACCAGCAATTTTCGGATGGTAATTGTGCAATTTGTGCTATTCTTGAATTGGCAAGAATGGACTAATTACGACTAGAAAGTTTCACTTGTGAATAATATGTTGGTTGGTTAGGTTTTTGATTGATTACTATATTTTTGGGATGTTTTGATTTCTCACAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCTGACTGGTTGCCTCCACCACTTCCTGCAGAGCACGTTCAACAGCTCAAAACTCTTGGCCTTTTATGA ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCTCCGGCGCCGATCACCGACCCTAGTGAGATCGACCTTGAAGCTGGTCAAGGGGAACAAATTCAGTGTAGAATTTGCCTTGAGACCGATGGTAGGGATTTTATTGCTCCTTGCAAATGCAAAGGGACATCCAAATATGTTCATCGAGAATGTCTGGATCATTGGCGAGCCGTGAAGGAAGGGTTTGCTTTTGCTCACTGTACCACATGTAAGGCCCCTTACCATTTGAGAGTACATGCTGTTGCTGACAGAAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTATATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGACATACTTAATAGATGGTTGTCAACATTACTGGCTTCGTCTTACTTGGGGTTTTGATAGCAAAATTAGTTTTTATTACATATGCGGGGCTTTATTATTTTTTGCATTGCTCGGCGTATCTGGCTGCTTCATCACTTGTTATGATCGAAGAGTTAGGAGTGATTTGGCTCAACCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCTGGACTATGTGCAGACTGTCATTTACCTGGTACTCTTTGTATGTGGACCGACTGTACCACTTGCTTCGAAAGTTGTGGAAGCATTGCAACTGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTACTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTGATTGGTATATTCTATAGTGTCTTGGTGGCTACCATGGTTGGCCAACGAATATGGCAACGACACTATCACATACTTGCGAAAAGAATGCTAACAAAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCTGACTGGTTGCCTCCACCACTTCCTGCAGAGCACGTTCAACAGCTCAAAACTCTTGGCCTTTTATGA ATGGCGGGTCAACCGTCAGATTCTTCCCCTCTTATTCCTCCGGCGCCGATCACCGACCCTAGTGAGATCGACCTTGAAGCTGGTCAAGGGGAACAAATTCAGTGTAGAATTTGCCTTGAGACCGATGGTAGGGATTTTATTGCTCCTTGCAAATGCAAAGGGACATCCAAATATGTTCATCGAGAATGTCTGGATCATTGGCGAGCCGTGAAGGAAGGGTTTGCTTTTGCTCACTGTACCACATGTAAGGCCCCTTACCATTTGAGAGTACATGCTGTTGCTGACAGAAAATGGCGAACCCTGAAATTTCGATTTTTTGTGACTAGAGACATTATATTTATATTTTTGGCGGTTCAGCTTGTAATTGCTTCTCTGGGATATTTGACATACTTAATAGATGGTTGTCAACATTACTGGCTTCGTCTTACTTGGGGTTTTGATAGCAAAATTAGTTTTTATTACATATGCGGGGCTTTATTATTTTTTGCATTGCTCGGCGTATCTGGCTGCTTCATCACTTGTTATGATCGAAGAGTTAGGAGTGATTTGGCTCAACCATGTAGAGAATTGTGTCTATGTTGTTGCCACCCTGGACTATGTGCAGACTGTCATTTACCTGGTACTCTTTGTATGTGGACCGACTGTACCACTTGCTTCGAAAGTTGTGGAAGCATTGCAACTGAATGTGGATGCCTAGGAGGTGCTGGTGAAGCAGGACTGCCATTATTACTTATAATGGCCTTGATTGTTCTTGGTTTGTTCACAGTGATTGGTATATTCTATAGTGTCTTGGTGGCTACCATGGTTGGCCAACGAATATGGCAACGACACTATCACATACTTGCGAAAAGAATGCTAACAAAGGAATATGTTGTGGAAGATGTAGATGGGGAGATGACAGGATCTGACTGGTTGCCTCCACCACTTCCTGCAGAGCACGTTCAACAGCTCAAAACTCTTGGCCTTTTATGA
BLAST of CSPI06G30550 vs. TrEMBL
Match: A0A0A0KGV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501240 PE=4 SV=1) HSP 1 Score: 677.2 bits (1746), Expect = 1.0e-191 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 1
BLAST of CSPI06G30550 vs. TrEMBL
Match: A0A0L9UAC0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g303300 PE=4 SV=1) HSP 1 Score: 614.0 bits (1582), Expect = 1.1e-172 Identity = 290/319 (90.91%), Postives = 303/319 (94.98%), Query Frame = 1
BLAST of CSPI06G30550 vs. TrEMBL
Match: A0A0S3S0Z9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G415500 PE=4 SV=1) HSP 1 Score: 614.0 bits (1582), Expect = 1.1e-172 Identity = 290/319 (90.91%), Postives = 303/319 (94.98%), Query Frame = 1
BLAST of CSPI06G30550 vs. TrEMBL
Match: V7D2Z9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G249400g PE=4 SV=1) HSP 1 Score: 612.8 bits (1579), Expect = 2.3e-172 Identity = 289/319 (90.60%), Postives = 303/319 (94.98%), Query Frame = 1
BLAST of CSPI06G30550 vs. TrEMBL
Match: D7SW29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01280 PE=4 SV=1) HSP 1 Score: 612.1 bits (1577), Expect = 4.0e-172 Identity = 289/317 (91.17%), Postives = 300/317 (94.64%), Query Frame = 1
BLAST of CSPI06G30550 vs. TAIR10
Match: AT2G22120.2 (AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 562.0 bits (1447), Expect = 2.4e-160 Identity = 263/317 (82.97%), Postives = 286/317 (90.22%), Query Frame = 1
BLAST of CSPI06G30550 vs. TAIR10
Match: AT1G11020.1 (AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 205.7 bits (522), Expect = 4.4e-53 Identity = 137/354 (38.70%), Postives = 174/354 (49.15%), Query Frame = 1
BLAST of CSPI06G30550 vs. TAIR10
Match: AT1G50440.1 (AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33 Identity = 72/150 (48.00%), Postives = 96/150 (64.00%), Query Frame = 1
BLAST of CSPI06G30550 vs. TAIR10
Match: AT3G47550.3 (AT3G47550.3 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 52.4 bits (124), Expect = 6.2e-07 Identity = 22/57 (38.60%), Postives = 30/57 (52.63%), Query Frame = 1
BLAST of CSPI06G30550 vs. NCBI nr
Match: gi|449451475|ref|XP_004143487.1| (PREDICTED: uncharacterized protein LOC101214008 [Cucumis sativus]) HSP 1 Score: 677.2 bits (1746), Expect = 1.4e-191 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 1
BLAST of CSPI06G30550 vs. NCBI nr
Match: gi|659080174|ref|XP_008440650.1| (PREDICTED: uncharacterized protein LOC103485004 [Cucumis melo]) HSP 1 Score: 671.4 bits (1731), Expect = 8.0e-190 Identity = 319/323 (98.76%), Postives = 322/323 (99.69%), Query Frame = 1
BLAST of CSPI06G30550 vs. NCBI nr
Match: gi|920696426|gb|KOM39651.1| (hypothetical protein LR48_Vigan03g303300 [Vigna angularis]) HSP 1 Score: 614.0 bits (1582), Expect = 1.5e-172 Identity = 290/319 (90.91%), Postives = 303/319 (94.98%), Query Frame = 1
BLAST of CSPI06G30550 vs. NCBI nr
Match: gi|593801160|ref|XP_007163617.1| (hypothetical protein PHAVU_001G249400g [Phaseolus vulgaris]) HSP 1 Score: 612.8 bits (1579), Expect = 3.4e-172 Identity = 289/319 (90.60%), Postives = 303/319 (94.98%), Query Frame = 1
BLAST of CSPI06G30550 vs. NCBI nr
Match: gi|225438613|ref|XP_002280917.1| (PREDICTED: uncharacterized protein LOC100266317 [Vitis vinifera]) HSP 1 Score: 612.1 bits (1577), Expect = 5.7e-172 Identity = 289/317 (91.17%), Postives = 300/317 (94.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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