CmaCh03G007660 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAATTTTCACTCGCATCCAAACCCTTTTCTTTGGATTTTGAGATCTTCGTTCTTGAATCTCATTCATTTCGGTGAAGATTTAAGCAGCGATTTTGCTTCCAATCGATCAATGGCTCTTCTCGGCTTCGCAGTTACCAACGAGGTACAATCTCAATTCCCAAATTCGATCTTCTTTCCCATTTCTCCGTCTGCTCGGCCTTTTTCCGCTCGTTCTTTTGATTATTCTCAAATTTAGGAGCTTATTTTGACGAGTTTATTAATGTCTTCTGGATAAAGAGGATGATCAGTTAGTGATCGGATGGAAGAGGCGTTGTATGTTTCACTTTTACCGATCTCCTATGTAGGATGCATTTTCTTCTGGCTAGGATGAAAATCACTTGAACTCCATTGCAGGAAGTTGTGTATTGTAGTGAGCTGAGTTGAGATGCGATTAACCGTTTGAGACTCAAGCAGGTTAGGGATAAAAGTTTGAGTGATTCGCTGCAAACAATGTTAGAAGGATATGACGAGAACTCGAATGTGGGGAAGCTATGATATTTGGGATCCTTTATGCAGGTTGAATTGCAGCTGCTTCTATATCCTCTTGGTTCCAATGTTGTTCGTACGGCATGATAAGCTTCGACTTAAAAACTCCTTCAACACTTGGTCTTATTTGTCTTAACGCCTTTCCTAGTAGCTTGTTCAGCTTATTTTCACTTCTTTCTAAGAAATATACTAGTGGGAGATGTTATTCCATTATCTACTGGTTTTCATTATGCCTTTTGGCTTGTTTAGTTGCTCTGTAGGGATTGTCTTACCTGTGAATTCCCCTTCAAGGCAATCGAGAAGAAAGATCAAAATGAGCAATAGAAGTGGCTTTTGTATTGGGCAGGTTGGGGAAAAAAAAATCTTTTCAGTTCTTTAGCTTTCTTGATTTTTAATTTCAAACAATGGATTATCTTGTATATTGTGTGTCATGGAGAAATATGCAAGCTCTTGGAGGTTTTGCAGGGTTGGCCTAGTTTTCTATGGGGCATGGGAAACATGTAAAGCAACGTACAATTTTGTGAGTTTGTAATCTGTAGGATCATTGTGTTGTCCCATTACGTATTGCCGTCAGCCTTACGATTTTAAAATGCGTGTGTTTGGGAGAGTTTTCCACACCTTATAAGAGATGTTTCGTTCTCCTCTCCAACCGACGTGGGATCTCACAATCTGACATATATGGACTATATTATATAGTATACTTAATCAATTTCATGGACGTGGATGAGCTTAAAACTAGTATTTTTGCTTCTGATTCTACTCATAATTTGTTATGTTATATGGCAATTAACATGTATGTAAACTTAAGCCTCTATATTCTGTCTAATGTGTCAGCACTTGGCATTAGGGGGTGGCATAAGGATGTTTGTTTTTAGGTAGCTTTTTTTTCCCTTGCCAAATAAACTACATGGCACTAAATAAAACTAAAACATATTTTTAGTCAGTCGAACACATTTCTGTCTTTCGTCTCCTTTTAAACCAAAAATGATGGGCGATAACTATAATTTTTAGAAAGATTGAGCTGTATTTCCGTACTTGTATGCTTGTTGGATTGCCATTAAACCTTGTTACAGTCTAGTCCTTGATATCAATTAGGAGACATATACATTGCTGACACCGATCGTTGCTGTATTTTTTTTTTTTTTTATCTGCTGTGAATTTGCAGGTTTCCAGTGTACTATCATCTGGAGTTGCGTTTCTTGTTTGTCCAGCTCCCAGCAACTCATGTATGTACGGGTTTCTGCATTTTCCCCCAGCAACTGATTTAAGTATGGATTTCTCCAGCAACTGATGTATGGATTTCTGCATTTCTAGATCTAATTTTCATAGGAAACAAAGTCTATTTTATCACAAACCCATGGTTACAAGTAATAAAGACCAAAAAAGGGGTTAGATCTTGTGAGAGTACCTACGGAGTTTGCAAAAGGATTCACCAATTGGAGTTAATAATTATAAAATATTTGTCAGGGACATCAATATAGAGCCAGAAAGGAGATAAACTGAAAGGAAGAAACGCCTATTCTCCTTCAGAGATCTCCTGCCATTTCTTTTCAGCAAAGAACCAAAATAGACCTTGAACAACACTTAGAGCGACACTTCAGAGATCTCCTACATTTAAACCAAATATGTTCTGAACTATAGTCTTCCATATCTATTCGTTGCTTTTCAACACTTATCGTTGCTCATTTTCAGGGTGCAGAGAAATTATACACGTACCAGCTGCATCCTCTCTTCCTTGGGCATACGATCTTGGGGGCGGTTTCAGATGAAGTGGTAACCCTCCCTCTTATAGTCATGTCTTGCCTCCACAGAAATATTAGCTCTTCAAAGGGCTTAAAAACCATCCACTTTATAAATATATAGACCTTTTATAGTCTCCGCTGTTTTATACAAAATTAAGGAGATCCCATATGCTCTCTAGTCCCTAACAATACAAGTTTTTTCTTTGGAGATTAAACAAACGATATTTAGTGTTTGTTTTTCGATTTTCAACTGCAGGTGAAAACCATTGCTGCACGTCAGCCAGAGATTCAGTAATTTAGAACCATGTTTATGAGGCTAATGAGATCGGGTGAAGACCGTAGCAATATCCTGCTTATTGGTTAATTTGTAATTCCATTTCTTTCAACTCTTTATCTTATCTCAACCTCTGGATCAGTAGAAAGGCTTGGGTTTGCAAGACCAAATCAGGCTGGAAGGTGCCAACAAATCGAGGATCAAATAAGACTTAAGCTTGGATTCAGAGTCGGATATTGATGATCGACTTATTGCCAACAGTTTCCATTCGCTGGTGTAGTTGCAACAATATCAACCTCCGGTTTCCTGGAAGTTCATATAGGTAGCTGCTTGTAAAAATGAGTTTGCCTCTTAAGATAGTGTCGATCAACAGACTTAGTCTTCCTTTTTCCAATACCTTTCACACAAAACTGAATACTTAAGGAAATATTAGAATTCTTTTCACAAGTTATATAAGTATTTGTAATCCCCTACAGTATTGATCCTATGCACCATCTGATTCCATGGTGCTGAGTAAAAAAAATTATAATGTTACAATTGAAACAGGGCCAAGCGTATACGTCAGAAAAATAGATTCCTATACTCCTACGACAAGATCATAAATCAGAGTTAATATGGTTCCCACTTTCCCAGTCCAGAATCCATATAGCTTTTGAATGGTGTAGAGTTGATGTCCTTAGTCCTTAC TCAATTTTCACTCGCATCCAAACCCTTTTCTTTGGATTTTGAGATCTTCGTTCTTGAATCTCATTCATTTCGGTGAAGATTTAAGCAGCGATTTTGCTTCCAATCGATCAATGGCTCTTCTCGGCTTCGCAGTTACCAACGAGGATGCATTTTCTTCTGGCTAGGATGAAAATCACTTGAACTCCATTGCAGGAAGTTGTGTATTGTAGTGAGCTGAGTTGAGATGCGATTAACCGTTTGAGACTCAAGCAGGTTAGGGATAAAAGTTTGAGTGATTCGCTGCAAACAATGTTAGAAGGATATGACGAGAACTCGAATGTGGGGAAGCTATGATATTTGGGATCCTTTATGCAGGTTGAATTGCAGCTGCTTCTATATCCTCTTGGTTCCAATGTTGTTCGTACGGCATGATAAGCTTCGACTTAAAAACTCCTTCAACACTTGGTCTTATTTGTCTTAACGCCTTTCCTAGTAGCTTGTTCAGCTTATTTTCACTTCTTTCTAAGAAATATACTAGTGGGAGATGTTATTCCATTATCTACTGGTTTTCATTATGCCTTTTGGCTTGTTTAGTTGCTCTGTAGGGATTGTCTTACCTGTGAATTCCCCTTCAAGGCAATCGAGAAGAAAGATCAAAATGAGCAATAGAAGTGGCTTTTGTATTGGGCAGCACTTGGCATTAGGGGGTGGCATAAGGATGTTTGTTTTTAGGTTTCCAGTGTACTATCATCTGGAGTTGCGTTTCTTGTTTGTCCAGCTCCCAGCAACTCATGGTGCAGAGAAATTATACACGTACCAGCTGCATCCTCTCTTCCTTGGGCATACGATCTTGGGGGCGGTTTCAGATGAAGTGGTGAAAACCATTGCTGCACGTCAGCCAGAGATTCATAGAAAGGCTTGGGTTTGCAAGACCAAATCAGGCTGGAAGGTGCCAACAAATCGAGGATCAAATAAGACTTAAGCTTGGATTCAGAGTCGGATATTGATGATCGACTTATTGCCAACAGTTTCCATTCGCTGGTGTAGTTGCAACAATATCAACCTCCGGTTTCCTGGAAGTTCATATAGGTAGCTGCTTGTAAAAATGAGTTTGCCTCTTAAGATAGTGTCGATCAACAGACTTAGTCTTCCTTTTTCCAATACCTTTCACACAAAACTGAATACTTAAGGAAATATTAGAATTCTTTTCACAAGTTATATAAGTATTTGTAATCCCCTACAGTATTGATCCTATGCACCATCTGATTCCATGGTGCTGAGTAAAAAAAATTATAATGTTACAATTGAAACAGGGCCAAGCGTATACGTCAGAAAAATAGATTCCTATACTCCTACGACAAGATCATAAATCAGAGTTAATATGGTTCCCACTTTCCCAGTCCAGAATCCATATAGCTTTTGAATGGTGTAGAGTTGATGTCCTTAGTCCTTAC ATGTTATTCCATTATCTACTGGTTTTCATTATGCCTTTTGGCTTGTTTAGTTGCTCTGTAGGGATTGTCTTACCTGTGAATTCCCCTTCAAGGCAATCGAGAAGAAAGATCAAAATGAGCAATAGAAGTGGCTTTTGTATTGGGCAGCACTTGGCATTAGGGGGTGGCATAAGGATGTTTGTTTTTAGGTTTCCAGTGTACTATCATCTGGAGTTGCGTTTCTTGTTTGTCCAGCTCCCAGCAACTCATGGTGCAGAGAAATTATACACGTACCAGCTGCATCCTCTCTTCCTTGGGCATACGATCTTGGGGGCGGTTTCAGATGAAGTGGTGAAAACCATTGCTGCACGTCAGCCAGAGATTCATAGAAAGGCTTGGGTTTGCAAGACCAAATCAGGCTGGAAGGTGCCAACAAATCGAGGATCAAATAAGACTTAA MLFHYLLVFIMPFGLFSCSVGIVLPVNSPSRQSRRKIKMSNRSGFCIGQHLALGGGIRMFVFRFPVYYHLELRFLFVQLPATHGAEKLYTYQLHPLFLGHTILGAVSDEVVKTIAARQPEIHRKAWVCKTKSGWKVPTNRGSNKT
BLAST of CmaCh03G007660 vs. TrEMBL
Match: I7CU90_9CARY (HVA22-like protein OS=Tamarix hispida PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07 Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 1
BLAST of CmaCh03G007660 vs. TrEMBL
Match: B9SGI8_RICCO (HVA22-like protein OS=Ricinus communis GN=RCOM_0553260 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07 Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 1
BLAST of CmaCh03G007660 vs. TrEMBL
Match: A0A0A0KJ20_CUCSA (HVA22-like protein OS=Cucumis sativus GN=Csa_6G502030 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06 Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 1
BLAST of CmaCh03G007660 vs. NCBI nr
Match: gi|659080246|ref|XP_008440689.1| (PREDICTED: HVA22-like protein k [Cucumis melo]) HSP 1 Score: 76.6 bits (187), Expect = 3.9e-11 Identity = 49/114 (42.98%), Postives = 63/114 (55.26%), Query Frame = 1
BLAST of CmaCh03G007660 vs. NCBI nr
Match: gi|449451505|ref|XP_004143502.1| (PREDICTED: HVA22-like protein k isoform X1 [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 3.6e-09 Identity = 48/117 (41.03%), Postives = 63/117 (53.85%), Query Frame = 1
BLAST of CmaCh03G007660 vs. NCBI nr
Match: gi|397746449|gb|AFO63292.1| (bZIP13 [Tamarix hispida]) HSP 1 Score: 63.9 bits (154), Expect = 2.6e-07 Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 1
BLAST of CmaCh03G007660 vs. NCBI nr
Match: gi|1009145210|ref|XP_015890208.1| (PREDICTED: scarecrow-like protein 15 [Ziziphus jujuba]) HSP 1 Score: 63.5 bits (153), Expect = 3.4e-07 Identity = 44/117 (37.61%), Postives = 59/117 (50.43%), Query Frame = 1
BLAST of CmaCh03G007660 vs. NCBI nr
Match: gi|255568265|ref|XP_002525107.1| (PREDICTED: HVA22-like protein k [Ricinus communis]) HSP 1 Score: 63.5 bits (153), Expect = 3.4e-07 Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|