CmaCh03G005700 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G005700
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRho GDP-dissociation inhibitor, putative
LocationCma_Chr03 : 5218932 .. 5220577 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGAAAAAAAAAAAAAAAGTGAAGAACCAGCTAAGCCTGGAATGAGTAATCGGTTTTAAGGTTTTAGGTGTTGAGATAAGAGTCAAGAAATCGTAAATTTCAGAAAGAAAAGCAGAAGATATAAGAACATGAAGATTGTATTTCCAATGAAAACCAATGATTTGAAGGAATCTTCTCCGGAAGACGAGGTCAAATTGTTCCACTCATTTCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCGATGAGCTGAATTTGGTTTCTTTTACAAAAGAAACACCCTGGAATCCCCTGTGACCCGTAAGTGACCTGCACGATCTCCCCATACTCGCATTTGTTATTTTTAGCATCACCAGACGACCATTTCTCTTCACGTTTCATTCATCCCTTTCTTTTTCTTTCTAATTTCCCAGGCCTATCCTTGTGTGGGTTTCTCCATTTCATTTTCTTAGCTTCTTTTGTCTATTTTCCCTCATCTCTCTGGTCTTTTGTCCACCAATTGGGTCGTTTTTTTTTCTTCTTCTTTGTCCTCAAACCATATAGTGGATGATCTTTTGACTTCTCCGGGCATTGAAGCGAAATGGGTCTTGACAACAATGAAGACGGAAATGGTTGTCCTGAGACAAAGAAAATAGTTGGAGTTGAAGAATATGAAGGTTGGGATGAAAGTAGAAAAAGAAGTGAGGGTTTTATGTGTGCAGCAGCAGCAGCAGCAGAGGATGATGAAGATGAAGACGGAAGGAAGATTGAGTTGGGTCCTCAGTGTACGCTGAAACAACAGTTTGAGAAAGATAAGGTTCCATTTTTTTCATTCTCCTTTTCTGGGTCGAATCAATTCTTTTCATGCTCAATTTCTAATGCTTCCAAAATGGTTTCTCTTAGGACGACGAGAGCCTGAGGAGGTGGAAGGAACAGCTTCTAGGGAGTGTGGATATTTCAGCTGTTGGAGGTAATTCTGTAAACCGTTTCTTATTAGCTTTCAGTTATACAGTCAACCATCATATCGTAAACTAATGCTAAAAAAAAAAAACAGAAACTTTGGAACCAGAGGTGAAGATTCTTAGCCTAGCGATTAGAAGCCCAGGAAGGGCAGACATTGTTCTACAAGTTCCTGAGAGTGGGAATCCAAAAGGGCCATGGTTTACATTGAAAGAAGGCAGCCGTTACAGCTTGATCTTCACCTTCAAAGTTAGCAATAACATTGTTGCAGGTCTCAAATACGCCAACACAGTCTGGAAAACTGGTGTCAAAGGTAGATTAGATACATATCTTCTTTGTTTCTCTCTATCATCTCTTTCATCAAAGACTCAGCCATTTTTGGTGTTTAAAATCTCAACAAAACAGTCGATAGCTCAAAAGAAATGCTGGGAACTTTCAGTCCTCAGGAAGAACCTTACACCCACGAAATCCCAGAAGATACAACCCCATCTGGCATTTTTGCTCGAGGATCATATTCGGCCAAAACCAAGGTAATTCAACTTTGTGTTTTAGTCTCAAAAAATGGCTGTTTTAGTCCTTAAATGGATGAGAAGTTTGTTTGTTTGTTTGTGGGCTTGCTTGCAGTTTGTTGATGATGACAACAAGTGCTACCTGGAAATCAAGTACACATTTGATATCAAGAAAGATTGGCATTCATCTTAG

mRNA sequence

AAAAGAAAAAAAAAAAAAAAGTGAAGAACCAGCTAAGCCTGGAATGAGTAATCGGTTTTAAGGTTTTAGGTGTTGAGATAAGAGTCAAGAAATCGTAAATTTCAGAAAGAAAAGCAGAAGATATAAGAACATGAAGATTGTATTTCCAATGAAAACCAATGATTTGAAGGAATCTTCTCCGGAAGACGAGGTCAAATTGTTCCACTCATTTCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCGATGAGCTGAATTTGGTTTCTTTTACAAAAGAAACACCCTGGAATCCCCTGTGACCCGTAAGTGACCTGCACGATCTCCCCATACTCGCATTTGTTATTTTTAGCATCACCAGACGACCATTTCTCTTCACGTTTCATTCATCCCTTTCTTTTTCTTTCTAATTTCCCAGGCCTATCCTTGTGTGGGTTTCTCCATTTCATTTTCTTAGCTTCTTTTGTCTATTTTCCCTCATCTCTCTGGTCTTTTGTCCACCAATTGGGTCGTTTTTTTTTCTTCTTCTTTGTCCTCAAACCATATAGTGGATGATCTTTTGACTTCTCCGGGCATTGAAGCGAAATGGGTCTTGACAACAATGAAGACGGAAATGGTTGTCCTGAGACAAAGAAAATAGTTGGAGTTGAAGAATATGAAGGTTGGGATGAAAGTAGAAAAAGAAGTGAGGGTTTTATGTGTGCAGCAGCAGCAGCAGCAGAGGATGATGAAGATGAAGACGGAAGGAAGATTGAGTTGGGTCCTCAGTGTACGCTGAAACAACAGTTTGAGAAAGATAAGGACGACGAGAGCCTGAGGAGGTGGAAGGAACAGCTTCTAGGGAGTGTGGATATTTCAGCTGTTGGAGAAACTTTGGAACCAGAGGTGAAGATTCTTAGCCTAGCGATTAGAAGCCCAGGAAGGGCAGACATTGTTCTACAAGTTCCTGAGAGTGGGAATCCAAAAGGGCCATGGTTTACATTGAAAGAAGGCAGCCGTTACAGCTTGATCTTCACCTTCAAAGTTAGCAATAACATTGTTGCAGGTCTCAAATACGCCAACACAGTCTGGAAAACTGGTGTCAAAGTCGATAGCTCAAAAGAAATGCTGGGAACTTTCAGTCCTCAGGAAGAACCTTACACCCACGAAATCCCAGAAGATACAACCCCATCTGGCATTTTTGCTCGAGGATCATATTCGGCCAAAACCAAGTTTGTTGATGATGACAACAAGTGCTACCTGGAAATCAAGTACACATTTGATATCAAGAAAGATTGGCATTCATCTTAG

Coding sequence (CDS)

ATGGGTCTTGACAACAATGAAGACGGAAATGGTTGTCCTGAGACAAAGAAAATAGTTGGAGTTGAAGAATATGAAGGTTGGGATGAAAGTAGAAAAAGAAGTGAGGGTTTTATGTGTGCAGCAGCAGCAGCAGCAGAGGATGATGAAGATGAAGACGGAAGGAAGATTGAGTTGGGTCCTCAGTGTACGCTGAAACAACAGTTTGAGAAAGATAAGGACGACGAGAGCCTGAGGAGGTGGAAGGAACAGCTTCTAGGGAGTGTGGATATTTCAGCTGTTGGAGAAACTTTGGAACCAGAGGTGAAGATTCTTAGCCTAGCGATTAGAAGCCCAGGAAGGGCAGACATTGTTCTACAAGTTCCTGAGAGTGGGAATCCAAAAGGGCCATGGTTTACATTGAAAGAAGGCAGCCGTTACAGCTTGATCTTCACCTTCAAAGTTAGCAATAACATTGTTGCAGGTCTCAAATACGCCAACACAGTCTGGAAAACTGGTGTCAAAGTCGATAGCTCAAAAGAAATGCTGGGAACTTTCAGTCCTCAGGAAGAACCTTACACCCACGAAATCCCAGAAGATACAACCCCATCTGGCATTTTTGCTCGAGGATCATATTCGGCCAAAACCAAGTTTGTTGATGATGACAACAAGTGCTACCTGGAAATCAAGTACACATTTGATATCAAGAAAGATTGGCATTCATCTTAG

Protein sequence

MGLDNNEDGNGCPETKKIVGVEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS
Homology
[Close]
BLAST of CmaCh03G005700 vs. Swiss-Prot
Match: GDIR_ARATH (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.6e-81
Identity = 145/202 (71.78%), Postives = 175/202 (86.63%), Query Frame = 1 

Query: 30  SRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVD 89
           SR+ SE  +CA     E++ED+D  K++LGPQ T+K+  EKDKDDESLR+WKEQLLGSVD
Sbjct: 41  SRQMSESSLCAT----EEEEDDDS-KLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVD 100

Query: 90  ISAVGETLEPEVKILSLAIRSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSN 149
           ++ +GETL+PEV+I SLAI SPGR DIVL VPE+GNPKG WFTLKEGS+Y+L FTF V+N
Sbjct: 101 VTNIGETLDPEVRIDSLAIISPGRPDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNN 160

Query: 150 NIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTK 209
           NIV+GL+Y NTVWKTGVKVD +KEMLGTFSPQ EPY H +PE+TTPSG+FARGSYSA+TK
Sbjct: 161 NIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTK 220

Query: 210 FVDDDNKCYLEIKYTFDIKKDW 232
           F+DDDNKCYLEI Y+FDI+K+W
Sbjct: 221 FLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of CmaCh03G005700 vs. Swiss-Prot
Match: GDIR1_HUMAN (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1 

Query: 41  AAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPE 100
           A  AAE++EDE     +   Q ++++  E DKDDESLR++KE LLG V +SA        
Sbjct: 12  AQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVV 71

Query: 101 VKILSLAIRS-PGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYAN 160
           V  L+L   S PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY  
Sbjct: 72  VTGLTLVCSSAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQ 131

Query: 161 TVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYL 220
             ++ GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSYS K++F DDD   +L
Sbjct: 132 HTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHL 191

Query: 221 EIKYTFDIKKDW 232
             ++   IKKDW
Sbjct: 192 SWEWNLTIKKDW 202

[Close]
BLAST of CmaCh03G005700 vs. Swiss-Prot
Match: GDIR1_MACFA (Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis GN=ARHGDIA PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 1 

Query: 41  AAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPE 100
           A  AAE++EDE     +   Q ++++  E DKDDESLR++KE LLG V +SA        
Sbjct: 12  AQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVV 71

Query: 101 VKILSLAIRS-PGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYAN 160
           V  L+L   S PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY  
Sbjct: 72  VTGLTLVCSSAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQ 131

Query: 161 TVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYL 220
             ++ GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSYS K++F DDD   +L
Sbjct: 132 HTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHL 191

Query: 221 EIKYTFDIKKDW 232
             ++   IKKDW
Sbjct: 192 SWEWNLTIKKDW 202

[Close]
BLAST of CmaCh03G005700 vs. Swiss-Prot
Match: GDIR1_BOVIN (Rho GDP-dissociation inhibitor 1 OS=Bos taurus GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 72/194 (37.11%), Postives = 113/194 (58.25%), Query Frame = 1 

Query: 41  AAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPE 100
           A  AAE++EDE     +   Q ++++  E DKDDESLR++KE LLG V +SA  +   P 
Sbjct: 12  AQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPN 71

Query: 101 VKILSLAI---RSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKY 160
           V +  L +    +PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY
Sbjct: 72  VVVTRLTLVCSTAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKY 131

Query: 161 ANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKC 220
               ++ GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSY+ K++F DDD   
Sbjct: 132 IQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTD 191

Query: 221 YLEIKYTFDIKKDW 232
           +L  ++   IKK+W
Sbjct: 192 HLSWEWNLTIKKEW 202

[Close]
BLAST of CmaCh03G005700 vs. Swiss-Prot
Match: GDIR1_MOUSE (Rho GDP-dissociation inhibitor 1 OS=Mus musculus GN=Arhgdia PE=1 SV=3)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 72/194 (37.11%), Postives = 113/194 (58.25%), Query Frame = 1 

Query: 41  AAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPE 100
           A  AAE++EDE     +   Q ++++  E DKDDESLR++KE LLG V +SA  +   P 
Sbjct: 12  AQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPN 71

Query: 101 VKILSLAI---RSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKY 160
           V +  L +    +PG  ++ L   +  + K   F LKEG  Y +  +F+V+  IV+G+KY
Sbjct: 72  VIVTRLTLVCSTAPGPLELDL-TGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKY 131

Query: 161 ANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKC 220
               ++ GVK+D +  M+G++ P+ E Y    P +  P G+ ARGSY+ K++F DDD   
Sbjct: 132 IQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDKTD 191

Query: 221 YLEIKYTFDIKKDW 232
           +L  ++   IKK+W
Sbjct: 192 HLSWEWNLTIKKEW 202

[Close]
BLAST of CmaCh03G005700 vs. TrEMBL
Match: B9S3J1_RICCO (Rho GDP-dissociation inhibitor, putative OS=Ricinus communis GN=RCOM_0669590 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.2e-89
Identity = 173/246 (70.33%), Postives = 194/246 (78.86%), Query Frame = 1 

Query: 1   MGLDNN------EDGNGCPETKKIVGVEEYEGWDES------RKRSEGFMCAAAAAAEDD 60
           MG D N      E      ++   VG EE    DES      R+ SE  + A     EDD
Sbjct: 1   MGSDENNSEEVSETKTASAKSPSAVGAEEQHRVDESKIGGLSRQMSESSIYATDQEEEDD 60

Query: 61  EDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAI 120
           E+   RKIELGPQ TLK+Q EKDKDDESLRRWKEQLLGSVDI+AVGETL+PEVKI+SLAI
Sbjct: 61  EE---RKIELGPQYTLKEQLEKDKDDESLRRWKEQLLGSVDINAVGETLDPEVKIISLAI 120

Query: 121 RSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKV 180
           +SPGR DIVL +PE GNPKG WFTLKEGSRYSL FTF+V NNIV+GLKY NTVWKTGVKV
Sbjct: 121 KSPGRDDIVLSIPEDGNPKGTWFTLKEGSRYSLQFTFQVGNNIVSGLKYTNTVWKTGVKV 180

Query: 181 DSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIK 235
           DS+KEMLGTFSPQ EPYTHE+PE+TTPSGIFARGSYSA++KFVDDDNKCYLEI YTFDI+
Sbjct: 181 DSAKEMLGTFSPQAEPYTHEMPEETTPSGIFARGSYSARSKFVDDDNKCYLEINYTFDIR 240

[Close]
BLAST of CmaCh03G005700 vs. TrEMBL
Match: A0A059CAG4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03927 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 8.9e-89
Identity = 166/231 (71.86%), Postives = 191/231 (82.68%), Query Frame = 1 

Query: 5   NNEDGN----GCPETKKIVGVEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGP 64
           N+E G     G     K   +EE    D   K  +    ++  A ED+ED++GRK+ELGP
Sbjct: 22  NSESGEKADVGADSRAKTPKIEESADGDPEGKIHKSASESSIGATEDEEDDEGRKLELGP 81

Query: 65  QCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQV 124
           Q TLK+QFEKDKDDESLRRWKEQLLGSVD+++VGETLE +VKILSLAIRSPGR+DIVL V
Sbjct: 82  QYTLKEQFEKDKDDESLRRWKEQLLGSVDLNSVGETLEADVKILSLAIRSPGRSDIVLSV 141

Query: 125 PESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 184
           PE+G PKG WFTLKEGSRYSL FTF+VSNNIV+GLKY NTVWKTGVKVDS+KEMLGTFSP
Sbjct: 142 PENGKPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKEMLGTFSP 201

Query: 185 QEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDW 232
           Q EPYTHE+ E+TTPSGIFARGSYSA++KF+DDDNKCYLEI YTFDI+KDW
Sbjct: 202 QSEPYTHEMHEETTPSGIFARGSYSARSKFIDDDNKCYLEINYTFDIRKDW 252

[Close]
BLAST of CmaCh03G005700 vs. TrEMBL
Match: B9IH83_POPTR (Rho GDP-dissociation inhibitor 1 family protein OS=Populus trichocarpa GN=POPTR_0016s01530g PE=4 SV=2)

HSP 1 Score: 333.2 bits (853), Expect = 2.6e-88
Identity = 169/239 (70.71%), Postives = 189/239 (79.08%), Query Frame = 1 

Query: 1   MGLD--NNEDGNGCPETKKIVGVEEYEGWDE------SRKRSEGFMCAAAAAAEDDEDED 60
           MG D  N E+ +    T K    EE    DE      SRK SE  +       EDDE+ +
Sbjct: 14  MGFDEKNKEEVSETAATTKTPPNEEENNVDEPKSGGISRKMSESSLYGTDQEEEDDEETN 73

Query: 61  GRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPG 120
            RKIELGPQCTLK+Q EKDKDDESLRRWKEQLLG+VDI A GETLEPEVKILSL I+S G
Sbjct: 74  ERKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGAVDIEAAGETLEPEVKILSLEIKSSG 133

Query: 121 RADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSK 180
           R DIVL VPE+G PKG WFTLKEGSRYSL FTF+V NNIV+GLKY NTVWKTG+KVDSSK
Sbjct: 134 RPDIVLSVPENGKPKGSWFTLKEGSRYSLQFTFEVKNNIVSGLKYTNTVWKTGIKVDSSK 193

Query: 181 EMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDW 232
           EM+GTFSPQ EPYTHE+PE+TTPSG+FARGSY+A++KFVDDDNKCYLEI YTFDI+KDW
Sbjct: 194 EMIGTFSPQTEPYTHEMPEETTPSGMFARGSYAARSKFVDDDNKCYLEINYTFDIRKDW 252

[Close]
BLAST of CmaCh03G005700 vs. TrEMBL
Match: B9HCG9_POPTR (Rho GDP-dissociation inhibitor 1 family protein OS=Populus trichocarpa GN=POPTR_0006s01210g PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 7.5e-88
Identity = 164/211 (77.73%), Postives = 181/211 (85.78%), Query Frame = 1 

Query: 21  VEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRW 80
           V+E +    SRK SE  + A     EDD++   RKIELGPQ TLK+Q EKDKDDESLRRW
Sbjct: 28  VDEPKSGGISRKMSESSLYATDQEEEDDDESHERKIELGPQYTLKEQLEKDKDDESLRRW 87

Query: 81  KEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQVPESGNPKGPWFTLKEGSRYS 140
           KEQLLG+VDI AVGETLEPEVKILSL I+SPGR DIVL VPE+G PKG WFTLKEGSRYS
Sbjct: 88  KEQLLGAVDIEAVGETLEPEVKILSLEIKSPGRPDIVLSVPENGKPKGSWFTLKEGSRYS 147

Query: 141 LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFA 200
           L FTF+V NNIV+GLKY+NTVWKTGVKVDSSKEM+GTFSPQ EPYTHE+PE+TTPSGIFA
Sbjct: 148 LQFTFEVKNNIVSGLKYSNTVWKTGVKVDSSKEMIGTFSPQAEPYTHEMPEETTPSGIFA 207

Query: 201 RGSYSAKTKFVDDDNKCYLEIKYTFDIKKDW 232
           RGSY+AKTKFVDDDNK YLEI YTFDI+KDW
Sbjct: 208 RGSYAAKTKFVDDDNKRYLEINYTFDIRKDW 238

[Close]
BLAST of CmaCh03G005700 vs. TrEMBL
Match: A0A059CF26_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01410 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 162/214 (75.70%), Postives = 185/214 (86.45%), Query Frame = 1 

Query: 21  VEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRW 80
           V+E  G    R  SE  +CA     EDDE+ED +KI+LGPQ TLK+QFEKDKDDESLRRW
Sbjct: 37  VDELHGEKIHRTMSESSVCAT----EDDEEEDVKKIDLGPQVTLKEQFEKDKDDESLRRW 96

Query: 81  KEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQVPESGNPKGPWFTLKEGSRYS 140
           KEQLLGSVD  +VGETLEP+VKI+SLAI SPGR DI+L VPE+G PKG WFTLKEGS Y 
Sbjct: 97  KEQLLGSVDFDSVGETLEPDVKIVSLAIISPGRPDILLPVPENGKPKGLWFTLKEGSCYR 156

Query: 141 LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFA 200
           L FTF+VSNNIV+GLKY+NTVWKTGVKVDS+KEM+GTFSPQ+EPYTHE+PE+TTPSGIFA
Sbjct: 157 LKFTFQVSNNIVSGLKYSNTVWKTGVKVDSTKEMIGTFSPQQEPYTHEMPEETTPSGIFA 216

Query: 201 RGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS 235
           RGSYSA++KFVDDDNKCYLEI YTFDI+KDW S+
Sbjct: 217 RGSYSARSKFVDDDNKCYLEINYTFDIRKDWSST 246

[Close]
BLAST of CmaCh03G005700 vs. TAIR10
Match: AT3G07880.1 (AT3G07880.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-82
Identity = 145/202 (71.78%), Postives = 175/202 (86.63%), Query Frame = 1 

Query: 30  SRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVD 89
           SR+ SE  +CA     E++ED+D  K++LGPQ T+K+  EKDKDDESLR+WKEQLLGSVD
Sbjct: 41  SRQMSESSLCAT----EEEEDDDS-KLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVD 100

Query: 90  ISAVGETLEPEVKILSLAIRSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSN 149
           ++ +GETL+PEV+I SLAI SPGR DIVL VPE+GNPKG WFTLKEGS+Y+L FTF V+N
Sbjct: 101 VTNIGETLDPEVRIDSLAIISPGRPDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNN 160

Query: 150 NIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTK 209
           NIV+GL+Y NTVWKTGVKVD +KEMLGTFSPQ EPY H +PE+TTPSG+FARGSYSA+TK
Sbjct: 161 NIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTK 220

Query: 210 FVDDDNKCYLEIKYTFDIKKDW 232
           F+DDDNKCYLEI Y+FDI+K+W
Sbjct: 221 FLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of CmaCh03G005700 vs. TAIR10
Match: AT1G12070.1 (AT1G12070.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-79
Identity = 143/212 (67.45%), Postives = 171/212 (80.66%), Query Frame = 1 

Query: 22  EEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCTLKQQFEKDKDDESLRRWK 81
           EE +G   SRK S   MC      +DDE+E+ +K+ELGP   LK+Q EKDKDDESLRRWK
Sbjct: 15  EEPKGQGLSRKNSHSSMCPT----DDDEEEEDKKLELGPMIALKEQLEKDKDDESLRRWK 74

Query: 82  EQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQVPESGNP--KGPWFTLKEGSRY 141
           EQLLGSVD+  VGET +P VKIL+L IRSP R D+VL +PE+G P  KGPWFTLKEGS+Y
Sbjct: 75  EQLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWFTLKEGSKY 134

Query: 142 SLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQEEPYTHEIPEDTTPSGIF 201
           +LIFTF+V+NNIV+GL+Y+NTVWKTG+KV S KEMLGTFSPQ EPYTH + E+T PSG+ 
Sbjct: 135 TLIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLL 194

Query: 202 ARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDW 232
            RGSYS K+KFVDDDN+CYLE  YTFDI+K+W
Sbjct: 195 VRGSYSVKSKFVDDDNQCYLENNYTFDIRKNW 222

[Close]
BLAST of CmaCh03G005700 vs. TAIR10
Match: AT1G62450.1 (AT1G62450.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 288.1 bits (736), Expect = 4.8e-78
Identity = 142/230 (61.74%), Postives = 176/230 (76.52%), Query Frame = 1 

Query: 4   DNNEDGNGCPETKKIVGVEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGPQCT 63
           D  + G    ET + +G+        SRK S     ++ +  EDDE+++ +K+ELGP   
Sbjct: 5   DEMKKGEASGETSEKMGL--------SRKNSG----SSLSPTEDDEEDEDKKLELGPMIA 64

Query: 64  LKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQVPES 123
           LK+Q E+DKDDESLRRWKEQLLG VD+  VGET +P VKIL L IRSP R ++VL +PE 
Sbjct: 65  LKEQLERDKDDESLRRWKEQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPED 124

Query: 124 G--NPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSPQ 183
           G  NPKGPWFT+KEGS+Y+L+F F+V+NNIV+GL+Y NTVWKTGVKVDS+K MLGTFSPQ
Sbjct: 125 GLPNPKGPWFTIKEGSKYTLVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQ 184

Query: 184 EEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDW 232
            E Y H +PE+ TPSG+FARGSYSA+TKF+DDDNKCYLEI YTFDI+K W
Sbjct: 185 AESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLEINYTFDIRKSW 222

[Close]
BLAST of CmaCh03G005700 vs. NCBI nr
Match: gi|659079087|ref|XP_008440067.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 398.7 bits (1023), Expect = 7.2e-108
Identity = 202/237 (85.23%), Postives = 214/237 (90.30%), Query Frame = 1 

Query: 1   MGLDNNEDGNGCPETKKIVGVEEYEGWDE---SRKRSEGFMCAAAAAAEDDEDEDGRKIE 60
           MGLDNNEDGNG  E KKI GVEE  G D    SRK SE  +CAA    EDDEDE+GRKIE
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEENGDDSVGLSRKMSETSICAA----EDDEDEEGRKIE 60

Query: 61  LGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIV 120
           LGPQCTLK+Q EKDKDDESLRRWKEQLLGSVD+SAVGETLEPEVKILSLAIR+PGRADIV
Sbjct: 61  LGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDMSAVGETLEPEVKILSLAIRTPGRADIV 120

Query: 121 LQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGT 180
           LQVPE+GNPKG WFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGT
Sbjct: 121 LQVPETGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGT 180

Query: 181 FSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS 235
           FSPQEEPYTHE+PEDTTPSG+FARGSYSA+TKF+DDDNK YLEI YTFDI+KDW SS
Sbjct: 181 FSPQEEPYTHEMPEDTTPSGMFARGSYSARTKFLDDDNKSYLEINYTFDIRKDWQSS 233

[Close]
BLAST of CmaCh03G005700 vs. NCBI nr
Match: gi|778720199|ref|XP_011658125.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 2.7e-107
Identity = 201/234 (85.90%), Postives = 210/234 (89.74%), Query Frame = 1 

Query: 1   MGLDNNEDGNGCPETKKIVGVEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGP 60
           MGLDNNEDGNG  E KKI GVEE +G DES   S      +  AAEDDEDE+GRKIELGP
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEEKG-DESVGLSIKMSETSICAAEDDEDEEGRKIELGP 60

Query: 61  QCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRSPGRADIVLQV 120
           QCTLK Q EKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIR+PGRADIVLQV
Sbjct: 61  QCTLKAQLEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAIRTPGRADIVLQV 120

Query: 121 PESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180
           PE GNPKG WFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP
Sbjct: 121 PEKGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFSP 180

Query: 181 QEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS 235
           QEEPYTHE+PEDTTPSGIFARGSYSA+TKFVDDD+KCYLE  YTFDI+KDW SS
Sbjct: 181 QEEPYTHEMPEDTTPSGIFARGSYSARTKFVDDDDKCYLEFNYTFDIRKDWQSS 233

[Close]
BLAST of CmaCh03G005700 vs. NCBI nr
Match: gi|659079083|ref|XP_008440065.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-106
Identity = 202/238 (84.87%), Postives = 214/238 (89.92%), Query Frame = 1 

Query: 1   MGLDNNEDGNGCPETKKIVGVEEYEGWDE---SRKRSEGFMCAAAAAAEDDEDEDGRKIE 60
           MGLDNNEDGNG  E KKI GVEE  G D    SRK SE  +CAA    EDDEDE+GRKIE
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEENGDDSVGLSRKMSETSICAA----EDDEDEEGRKIE 60

Query: 61  LGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVG-ETLEPEVKILSLAIRSPGRADI 120
           LGPQCTLK+Q EKDKDDESLRRWKEQLLGSVD+SAVG ETLEPEVKILSLAIR+PGRADI
Sbjct: 61  LGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDMSAVGAETLEPEVKILSLAIRTPGRADI 120

Query: 121 VLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLG 180
           VLQVPE+GNPKG WFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLG
Sbjct: 121 VLQVPETGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLG 180

Query: 181 TFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS 235
           TFSPQEEPYTHE+PEDTTPSG+FARGSYSA+TKF+DDDNK YLEI YTFDI+KDW SS
Sbjct: 181 TFSPQEEPYTHEMPEDTTPSGMFARGSYSARTKFLDDDNKSYLEINYTFDIRKDWQSS 234

[Close]
BLAST of CmaCh03G005700 vs. NCBI nr
Match: gi|778720191|ref|XP_011658122.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 6.7e-106
Identity = 201/235 (85.53%), Postives = 210/235 (89.36%), Query Frame = 1 

Query: 1   MGLDNNEDGNGCPETKKIVGVEEYEGWDESRKRSEGFMCAAAAAAEDDEDEDGRKIELGP 60
           MGLDNNEDGNG  E KKI GVEE +G DES   S      +  AAEDDEDE+GRKIELGP
Sbjct: 1   MGLDNNEDGNGSLEIKKIGGVEEEKG-DESVGLSIKMSETSICAAEDDEDEEGRKIELGP 60

Query: 61  QCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVG-ETLEPEVKILSLAIRSPGRADIVLQ 120
           QCTLK Q EKDKDDESLRRWKEQLLGSVDISAVG ETLEPEVKILSLAIR+PGRADIVLQ
Sbjct: 61  QCTLKAQLEKDKDDESLRRWKEQLLGSVDISAVGAETLEPEVKILSLAIRTPGRADIVLQ 120

Query: 121 VPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFS 180
           VPE GNPKG WFTLKEGSRY+LIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFS
Sbjct: 121 VPEKGNPKGLWFTLKEGSRYNLIFTFKVSNNIVAGLKYANTVWKTGVKVDSSKEMLGTFS 180

Query: 181 PQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIKKDWHSS 235
           PQEEPYTHE+PEDTTPSGIFARGSYSA+TKFVDDD+KCYLE  YTFDI+KDW SS
Sbjct: 181 PQEEPYTHEMPEDTTPSGIFARGSYSARTKFVDDDDKCYLEFNYTFDIRKDWQSS 234

[Close]
BLAST of CmaCh03G005700 vs. NCBI nr
Match: gi|223540220|gb|EEF41793.1| (Rho GDP-dissociation inhibitor, putative [Ricinus communis])

HSP 1 Score: 335.5 bits (859), Expect = 7.5e-89
Identity = 173/246 (70.33%), Postives = 194/246 (78.86%), Query Frame = 1 

Query: 1   MGLDNN------EDGNGCPETKKIVGVEEYEGWDES------RKRSEGFMCAAAAAAEDD 60
           MG D N      E      ++   VG EE    DES      R+ SE  + A     EDD
Sbjct: 1   MGSDENNSEEVSETKTASAKSPSAVGAEEQHRVDESKIGGLSRQMSESSIYATDQEEEDD 60

Query: 61  EDEDGRKIELGPQCTLKQQFEKDKDDESLRRWKEQLLGSVDISAVGETLEPEVKILSLAI 120
           E+   RKIELGPQ TLK+Q EKDKDDESLRRWKEQLLGSVDI+AVGETL+PEVKI+SLAI
Sbjct: 61  EE---RKIELGPQYTLKEQLEKDKDDESLRRWKEQLLGSVDINAVGETLDPEVKIISLAI 120

Query: 121 RSPGRADIVLQVPESGNPKGPWFTLKEGSRYSLIFTFKVSNNIVAGLKYANTVWKTGVKV 180
           +SPGR DIVL +PE GNPKG WFTLKEGSRYSL FTF+V NNIV+GLKY NTVWKTGVKV
Sbjct: 121 KSPGRDDIVLSIPEDGNPKGTWFTLKEGSRYSLQFTFQVGNNIVSGLKYTNTVWKTGVKV 180

Query: 181 DSSKEMLGTFSPQEEPYTHEIPEDTTPSGIFARGSYSAKTKFVDDDNKCYLEIKYTFDIK 235
           DS+KEMLGTFSPQ EPYTHE+PE+TTPSGIFARGSYSA++KFVDDDNKCYLEI YTFDI+
Sbjct: 181 DSAKEMLGTFSPQAEPYTHEMPEETTPSGIFARGSYSARSKFVDDDNKCYLEINYTFDIR 240

The following BLAST results are available for this feature:
BLAST of CmaCh03G005700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDIR_ARATH2.6e-8171.78Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1[more]
GDIR1_HUMAN1.5e-2839.06Rho GDP-dissociation inhibitor 1 OS=Homo sapiens GN=ARHGDIA PE=1 SV=3[more]
GDIR1_MACFA1.5e-2839.06Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis GN=ARHGDIA PE=2 SV=1[more]
GDIR1_BOVIN1.3e-2737.11Rho GDP-dissociation inhibitor 1 OS=Bos taurus GN=ARHGDIA PE=1 SV=3[more]
GDIR1_MOUSE1.6e-2737.11Rho GDP-dissociation inhibitor 1 OS=Mus musculus GN=Arhgdia PE=1 SV=3[more]
BLAST of CmaCh03G005700 vs. TrEMBL
Match NameE-valueIdentityDescription
B9S3J1_RICCO5.2e-8970.33Rho GDP-dissociation inhibitor, putative OS=Ricinus communis GN=RCOM_0669590 PE=... [more]
A0A059CAG4_EUCGR8.9e-8971.86Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03927 PE=4 SV=1[more]
B9IH83_POPTR2.6e-8870.71Rho GDP-dissociation inhibitor 1 family protein OS=Populus trichocarpa GN=POPTR_... [more]
B9HCG9_POPTR7.5e-8877.73Rho GDP-dissociation inhibitor 1 family protein OS=Populus trichocarpa GN=POPTR_... [more]
A0A059CF26_EUCGR1.7e-8775.70Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01410 PE=4 SV=1[more]
BLAST of CmaCh03G005700 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07880.11.4e-8271.78 Immunoglobulin E-set superfamily protein[more]
AT1G12070.12.6e-7967.45 Immunoglobulin E-set superfamily protein[more]
AT1G62450.14.8e-7861.74 Immunoglobulin E-set superfamily protein[more]
BLAST of CmaCh03G005700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659079087|ref|XP_008440067.1|7.2e-10885.23PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis melo][more]
gi|778720199|ref|XP_011658125.1|2.7e-10785.90PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis sativus][more]
gi|659079083|ref|XP_008440065.1|1.8e-10684.87PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo][more]
gi|778720191|ref|XP_011658122.1|6.7e-10685.53PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis sativus][more]
gi|223540220|gb|EEF41793.1|7.5e-8970.33Rho GDP-dissociation inhibitor, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000406Rho_GDI
IPR014756Ig_E-set
IPR024792RhoGDI_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G005700.1CmaCh03G005700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000406Rho protein GDP-dissociation inhibitorPRINTSPR00492RHOGDIcoord: 168..183
score: 4.9E-6coord: 210..227
score: 4.9E-6coord: 151..167
score: 4.
IPR000406Rho protein GDP-dissociation inhibitorPANTHERPTHR10980RHO GDP-DISSOCIATION INHIBITORcoord: 2..234
score: 5.7E
IPR000406Rho protein GDP-dissociation inhibitorPFAMPF02115Rho_GDIcoord: 43..230
score: 2.6
IPR014756Immunoglobulin E-setunknownSSF81296E set domainscoord: 42..232
score: 4.2
IPR024792Rho GDP-dissociation inhibitor domainGENE3DG3DSA:2.70.50.30coord: 56..232
score: 8.0
NoneNo IPR availablePANTHERPTHR10980:SF18IMMUNOGLOBULIN E-SET SUPERFAMILY PROTEINcoord: 2..234
score: 5.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G005700Cucsa.044780Cucumber (Gy14) v1cgycmaB0047
CmaCh03G005700Cla014406Watermelon (97103) v1cmawmB632
CmaCh03G005700MELO3C007434Melon (DHL92) v3.5.1cmameB611
CmaCh03G005700ClCG01G021490Watermelon (Charleston Gray)cmawcgB579
CmaCh03G005700CSPI06G33050Wild cucumber (PI 183967)cmacpiB689
CmaCh03G005700CmoCh03G005990Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G005700Lsi01G004760Bottle gourd (USVL1VR-Ls)cmalsiB597
CmaCh03G005700Cp4.1LG10g10050Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G005700Cp4.1LG20g06570Cucurbita pepo (Zucchini)cmacpeB676
CmaCh03G005700MELO3C007434.2Melon (DHL92) v3.6.1cmamedB694
CmaCh03G005700CsaV3_6G048510Cucumber (Chinese Long) v3cmacucB0809
CmaCh03G005700Cla97C01G021050Watermelon (97103) v2cmawmbB670
CmaCh03G005700Bhi03G000492Wax gourdcmawgoB0788
CmaCh03G005700CsGy6G032640Cucumber (Gy14) v2cgybcmaB831
CmaCh03G005700CsGy1G015620Cucumber (Gy14) v2cgybcmaB128
CmaCh03G005700Carg00494Silver-seed gourdcarcmaB0567
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh03G005700CmaCh13G003970Cucurbita maxima (Rimu)cmacmaB233
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G005700Cucurbita pepo (Zucchini)cmacpeB671
CmaCh03G005700Silver-seed gourdcarcmaB0912
CmaCh03G005700Cucurbita maxima (Rimu)cmacmaB399
CmaCh03G005700Cucurbita maxima (Rimu)cmacmaB523
CmaCh03G005700Cucurbita moschata (Rifu)cmacmoB667
CmaCh03G005700Cucumber (Chinese Long) v2cmacuB681