CmaCh03G004130 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTTTTTGGCTGAATTTTCATGTGCAGAGGCATCGGAATGCAAAGAGAGAAAGATGAAGTAAAGCTTTCCGTTTCTTCTTCTACAAAATAGTTTTTGTTTTCTGAATAAAATTAGAATTTCTCTGAGTTGTTATTTATCGGTTTCGAATGGATTAGGGAGGAGAATGCAGCAGGACAGAACTGTGCAAAAATGGCGAACAAAATCGATGCCCTTGTTTTTATGTGGGGTTATCTTCCCGGAGCTTTGCCGGATAAATCCCTTTTGCTCTCGCCGGAGCCTGTGCGGCTTCCGGGTTCGATCGACGGCGGGGATTTGTGGAAGGAAGTCTGTGGCGGTGGTTGTGGGTTTGCTATGGCCATTTCAGGTTTTAAAGCTCTCGATCCTTGGAATCTTGTTCTTTTTGTTTTCTGGAATTCTGGTTTTCTTTTTTTCCTTTGAATTTTGGTCGATGAACTGTTCATGGATTTGGGTTTTAGATTCTGGAAAGTTAATTACGTGGGGTGCGGCGGATGAGGAAAGTCAAATTTACCTGACTTCGGGAAAACATGGGGTAATGTGGATGTTTGAGTGA TCTTCTTTTTTGGCTGAATTTTCATGTGCAGAGGCATCGGAATGCAAAGAGAGAAAGATGAAGGAGGAGAATGCAGCAGGACAGAACTGTGCAAAAATGGCGAACAAAATCGATGCCCTTGTTTTTATGTGGGGTTATCTTCCCGGAGCTTTGCCGGATAAATCCCTTTTGCTCTCGCCGGAGCCTGTGCGGCTTCCGGGTTCGATCGACGGCGGGGATTTGTGGAAGGAAGTCTGTGGCGGTGGTTGTGGGTTTGCTATGGCCATTTCAGATTCTGGAAAGTTAATTACGTGGGGTGCGGCGGATGAGGAAAGTCAAATTTACCTGACTTCGGGAAAACATGGGGTAATGTGGATGTTTGAGTGA ATGAAGGAGGAGAATGCAGCAGGACAGAACTGTGCAAAAATGGCGAACAAAATCGATGCCCTTGTTTTTATGTGGGGTTATCTTCCCGGAGCTTTGCCGGATAAATCCCTTTTGCTCTCGCCGGAGCCTGTGCGGCTTCCGGGTTCGATCGACGGCGGGGATTTGTGGAAGGAAGTCTGTGGCGGTGGTTGTGGGTTTGCTATGGCCATTTCAGATTCTGGAAAGTTAATTACGTGGGGTGCGGCGGATGAGGAAAGTCAAATTTACCTGACTTCGGGAAAACATGGGGTAATGTGGATGTTTGAGTGA MKEENAAGQNCAKMANKIDALVFMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDLWKEVCGGGCGFAMAISDSGKLITWGAADEESQIYLTSGKHGVMWMFE
BLAST of CmaCh03G004130 vs. TrEMBL
Match: A0A068TXR6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029947001 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.2e-27 Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 1
BLAST of CmaCh03G004130 vs. TrEMBL
Match: A0A103YIV0_CYNCS (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II OS=Cynara cardunculus var. scolymus GN=Ccrd_011748 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 9.4e-27 Identity = 60/93 (64.52%), Postives = 69/93 (74.19%), Query Frame = 1
BLAST of CmaCh03G004130 vs. TrEMBL
Match: R0H3D3_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10016999mg PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.6e-26 Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 1
BLAST of CmaCh03G004130 vs. TrEMBL
Match: M5W4I0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005731mg PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.6e-26 Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of CmaCh03G004130 vs. TrEMBL
Match: V4L456_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010341mg PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.6e-26 Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 1
BLAST of CmaCh03G004130 vs. TAIR10
Match: AT3G53830.1 (AT3G53830.1 Regulator of chromosome condensation (RCC1) family protein) HSP 1 Score: 118.2 bits (295), Expect = 2.9e-27 Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = 1
BLAST of CmaCh03G004130 vs. TAIR10
Match: AT3G55580.1 (AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein) HSP 1 Score: 105.1 bits (261), Expect = 2.5e-23 Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 1
BLAST of CmaCh03G004130 vs. NCBI nr
Match: gi|659069112|ref|XP_008448203.1| (PREDICTED: ultraviolet-B receptor UVR8-like isoform X2 [Cucumis melo]) HSP 1 Score: 191.4 bits (485), Expect = 7.6e-46 Identity = 90/96 (93.75%), Postives = 91/96 (94.79%), Query Frame = 1
BLAST of CmaCh03G004130 vs. NCBI nr
Match: gi|659069110|ref|XP_008448195.1| (PREDICTED: ultraviolet-B receptor UVR8-like isoform X1 [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 1.1e-44 Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 1
BLAST of CmaCh03G004130 vs. NCBI nr
Match: gi|449448608|ref|XP_004142058.1| (PREDICTED: ultraviolet-B receptor UVR8-like isoform X5 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 5.4e-44 Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 1
BLAST of CmaCh03G004130 vs. NCBI nr
Match: gi|778693505|ref|XP_011653649.1| (PREDICTED: ultraviolet-B receptor UVR8-like isoform X3 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 5.4e-44 Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 1
BLAST of CmaCh03G004130 vs. NCBI nr
Match: gi|778693509|ref|XP_011653650.1| (PREDICTED: ultraviolet-B receptor UVR8-like isoform X4 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 5.4e-44 Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |