CmaCh03G003410 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G003410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant protein
Location	Cma_Chr03 : 4111933 .. 4113187 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCTCCAAAGGGCCTAAAATTCAAACCCTTTCGTATTCATATTCACACAAGCCAGAAAGCAAGAAAAGAAGGAATATGGCGGCGCAGCAGGAGAGATCGGAGCTGGAGGCCAAAGCAAAGCAGGGAGAGACCGTGGTTCCGGGCGGAACCGGCGGGAAAAGCCTCGAAGCTCAAGAACGTCTCGCCGAAGGTAATAATTGTCAGGAATCACGAACAATTCTTTATAATGACATTGACTCTTCGTAGAACCCTCAAACAGTCTATACTTGATCAATCGAGGCTCAATTCTTTCTTTAAAGTCTTCAAAGTTTAACACGACTACATTAAAGGTGACACTAATACTATATCTTTAAGAATTTTATGATAACATGACTACATTAAATTACGAATCTCACAGTATGGTCGAATTTTATTGACATGCCTCAAATTAAAGGCATAATTTTGATTTTAGGTTAAGAATCACGATTTTTCAGGATCGTATGGTATTGCTCATTTTAAGTCAAGCTCTTATAGCTTTTTATGGTCGAGTTAAGGGCATGGCTTTGATACCATTATTGTCGAATTTTATTGGCTATTCTTGAAATAAGTGAAACTTGGTTGGTTGAAGGTCGGAGCCGGGGCGGGCAGACGAGGAAAGAGCAGTTGGGGTATGAAGGGTATCAGGAGATGGGGCACCGAGGAGGAGAGACGAGAAGGGAGCAGATGGGGCAAGAAGGGTACCAAGAGATGGGCAAGAAAGGTGGGCTGAGCACCATGGATAAGTCCGCCTCCGAGCGGGTGGAGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGCTGAACCACCCTGGCTTTGGTATATGTACAATAATATGTATGTGGGCGGGTGTTTTTCATTTCCTTTACTGTTCTACTTTATGGTTGCCTTTTGTTTTCTCGACACGTGCACGTCGGTGCCTTATCGGTGGGGGGTTTGGTATTTGCGGAAGGGACGAATTTTGCTGTACCTTGTGTTCTCTTCTGCATGGAAATAGAAGTAGGGGGCTTGAAGTTATAAACTTACGACATGCTTTATTCAACTTTTGTTCGGTCATACACTTCATTTGTGCATGTCCCCGTCCCCAGTATCTTCTTGAGACACGGACTATCTTGACTTTTTAAGTATCGGATTCTTTCGTGTCTATATTGAATTATTTACGACATATTTACGACATACAATCGAAGCACTCAGAGCTCAGATTCGTCTCCTTACTCGTCCAC

mRNA sequence

ACTTCTCCAAAGGGCCTAAAATTCAAACCCTTTCGTATTCATATTCACACAAGCCAGAAAGCAAGAAAAGAAGGAATATGGCGGCGCAGCAGGAGAGATCGGAGCTGGAGGCCAAAGCAAAGCAGGGAGAGACCGTGGTTCCGGGCGGAACCGGCGGGAAAAGCCTCGAAGCTCAAGAACGTCTCGCCGAAGGTCGGAGCCGGGGCGGGCAGACGAGGAAAGAGCAGTTGGGGTATGAAGGGTATCAGGAGATGGGGCACCGAGGAGGAGAGACGAGAAGGGAGCAGATGGGGCAAGAAGGGTACCAAGAGATGGGCAAGAAAGGTGGGCTGAGCACCATGGATAAGTCCGCCTCCGAGCGGGTGGAGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGCTGAACCACCCTGGCTTTGGTATATGTACAATAATATGTATGTGGGCGGGTGTTTTTCATTTCCTTTACTGTTCTACTTTATGGTTGCCTTTTGTTTTCTCGACACGTGCACGTCGGTGCCTTATCGGTGGGGGGTTTGGTATTTGCGGAAGGGACGAATTTTGCTGTACCTTGTGTTCTCTTCTGCATGGAAATAGAAGTAGGGGGCTTGAAGTTATAAACTTACGACATGCTTTATTCAACTTTTGTTCGGTCATACACTTCATTTGTGCATGTCCCCGTCCCCAGTATCTTCTTGAGACACGGACTATCTTGACTTTTTAAGTATCGGATTCTTTCGTGTCTATATTGAATTATTTACGACATATTTACGACATACAATCGAAGCACTCAGAGCTCAGATTCGTCTCCTTACTCGTCCAC

Coding sequence (CDS)

ATGGCGGCGCAGCAGGAGAGATCGGAGCTGGAGGCCAAAGCAAAGCAGGGAGAGACCGTGGTTCCGGGCGGAACCGGCGGGAAAAGCCTCGAAGCTCAAGAACGTCTCGCCGAAGGTCGGAGCCGGGGCGGGCAGACGAGGAAAGAGCAGTTGGGGTATGAAGGGTATCAGGAGATGGGGCACCGAGGAGGAGAGACGAGAAGGGAGCAGATGGGGCAAGAAGGGTACCAAGAGATGGGCAAGAAAGGTGGGCTGAGCACCATGGATAAGTCCGCCTCCGAGCGGGTGGAGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGCTGA

Protein sequence

MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGHRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR

Homology

[Close]

BLAST of CmaCh03G003410 vs. Swiss-Prot
Match: EML_DAUCA (Carrot ABA-induced in somatic embryos 3 OS=Daucus carota GN=CAISE3 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.5e-39
Identity = 85/110 (77.27%), Postives = 101/110 (91.82%), Query Frame = 1


Query: 2   AAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGH 61
           + Q++RSEL+A+AKQGETVVPGGTGGKSLEAQE LAEGRS+GG TRKEQLG EGYQE+G 
Sbjct: 3   SGQEKRSELDARAKQGETVVPGGTGGKSLEAQEHLAEGRSKGGHTRKEQLGTEGYQEIGT 62

Query: 62  RGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
           +GGETRREQMG+EGY++MG+ GGL+T DKS +ER EEEGI+ID+SKFRTK
Sbjct: 63  KGGETRREQMGKEGYEQMGRMGGLATKDKSGAERAEEEGIDIDQSKFRTK 112

[Close]

BLAST of CmaCh03G003410 vs. Swiss-Prot
Match: SLE1_SOYBN (Protein SLE1 OS=Glycine max GN=SLE1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.6e-39
Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 1


Query: 4   QQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGHRG 63
           Q  R EL+ KA+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTRK+QLG EGY EMG +G
Sbjct: 5   QANREELDEKARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKQQLGSEGYHEMGTKG 64

Query: 64  GETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFR 110
           G+TR+EQMG+EGYQEMG+KGGLSTMDKS  ER EEEGIEIDESKF+
Sbjct: 65  GQTRKEQMGREGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESKFK 110

[Close]

BLAST of CmaCh03G003410 vs. Swiss-Prot
Match: LE193_HORVU (Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare GN=B19.3 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-35
Identity = 85/130 (65.38%), Postives = 99/130 (76.15%), Query Frame = 1


Query: 2   AAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQ---------------- 61
           + QQERSEL+  A++GETVVPGGTGGK+LEAQE LAEGRSRGGQ                
Sbjct: 3   SGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRSRGGQTRKDQLGEEGYREMGH 62

Query: 62  ----TRKEQLGYEGYQEMGHRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGI 112
               TRKEQLG EGY+EMGH+GGETR+EQMG+EGY EMG+KGGLSTM++S  ER   EGI
Sbjct: 63  KGGETRKEQLGEEGYREMGHKGGETRKEQMGEEGYHEMGRKGGLSTMEESGGERAAREGI 122

[Close]

BLAST of CmaCh03G003410 vs. Swiss-Prot
Match: EM1_ARATH (Em-like protein GEA1 OS=Arabidopsis thaliana GN=EM1 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.3e-33
Identity = 88/152 (57.89%), Postives = 98/152 (64.47%), Query Frame = 1


Query: 1   MAAQQ-ERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEM 60
           MA++Q  R EL+ KAKQGETVVPGGTGG SLEAQE LAEGRS+GGQTRKEQLG+EGYQE+
Sbjct: 1   MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query: 61  GHRGGETRREQMGQEGYQEMGKK------------------------------------- 112
           GH+GGE R+EQ+G EGYQEMG K                                     
Sbjct: 61  GHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEM 120

[Close]

BLAST of CmaCh03G003410 vs. Swiss-Prot
Match: LE194_HORVU (Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare GN=B19.4 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32
Identity = 84/150 (56.00%), Postives = 99/150 (66.00%), Query Frame = 1


Query: 2   AAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMGH 61
           + QQERSEL+  A++GETVVPGGTGGK+LEAQE LAEGRSRGGQTRKEQLG EGY+EMGH
Sbjct: 3   SGQQERSELDRMAREGETVVPGGTGGKTLEAQEHLAEGRSRGGQTRKEQLGEEGYREMGH 62

Query: 62  RGGETRREQMGQEGYQEMGKK--------------------------------------- 112
           +GGETR+EQ+G+EGY+EMG K                                       
Sbjct: 63  KGGETRKEQLGEEGYREMGHKGGETRKEQLGEEGYREMGHKGGETRKEQMGEEGYREMGR 122

[Close]

BLAST of CmaCh03G003410 vs. TrEMBL
Match: A0A0A0KZY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G311730 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.9e-43
Identity = 96/113 (84.96%), Postives = 107/113 (94.69%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RS L+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGYQE+G
Sbjct: 1   MASQQQRSALDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE RREQMGQEGY+EMG+KGGLSTMDKS  ERVEEEGIEIDESKF  K+R
Sbjct: 61  HQGGEARREQMGQEGYKEMGRKGGLSTMDKSGGERVEEEGIEIDESKFTNKNR 113

[Close]

BLAST of CmaCh03G003410 vs. TrEMBL
Match: A0A067JS88_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00457 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.7e-40
Identity = 90/111 (81.08%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA +QER+EL+A+A+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTR+EQLG EGY+E+G
Sbjct: 1   MATEQERAELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYKELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
           HRGGETRREQ+G EGYQEMG+KGGLSTMDKS  ER  EEGIEIDESK++T+
Sbjct: 61  HRGGETRREQIGHEGYQEMGRKGGLSTMDKSGEERAAEEGIEIDESKYKTR 111

[Close]

BLAST of CmaCh03G003410 vs. TrEMBL
Match: A0A0D2QCE0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G183600 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-39
Identity = 88/110 (80.00%), Postives = 101/110 (91.82%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQER EL+A+A+QGETV+PGGTGGKSLEAQE LAEGRSRGGQTRKEQLG EGYQE+G
Sbjct: 1   MASQQERQELDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGREGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRT 111
            +GG+TR+EQ+G EGYQEMG+KGGLSTMDKS  ER  EEGI+IDESK+RT
Sbjct: 61  SKGGQTRKEQIGSEGYQEMGRKGGLSTMDKSGGERAAEEGIDIDESKYRT 110

[Close]

BLAST of CmaCh03G003410 vs. TrEMBL
Match: A0A067ES79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040090mg PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.9e-39
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ R EL+ +A+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTR+EQLG EGYQEMG
Sbjct: 1   MASQQGRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRT 111
           HRGG+ RREQMG EGYQEMG+KGGLST+DKS  ER  EEGIEIDESK++T
Sbjct: 61  HRGGQMRREQMGSEGYQEMGRKGGLSTIDKSGGERAAEEGIEIDESKYKT 110

[Close]

BLAST of CmaCh03G003410 vs. TrEMBL
Match: I1HKD9_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 88/111 (79.28%), Postives = 101/111 (90.99%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+ QERSEL+ KA++GETVVPGGTGGK+LEAQE LA+GRSRGGQTRKEQ+G EGY EMG
Sbjct: 1   MASAQERSELDRKAREGETVVPGGTGGKTLEAQEHLAQGRSRGGQTRKEQIGEEGYSEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
           H+GGETR+EQMG EGY+EMG+KGGLSTM++S  ERV  EGIEIDESKFRTK
Sbjct: 61  HKGGETRKEQMGSEGYREMGRKGGLSTMEESGGERVAREGIEIDESKFRTK 111

[Close]

BLAST of CmaCh03G003410 vs. TAIR10
Match: AT3G51810.1 (AT3G51810.1 Stress induced protein)

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-34
Identity = 88/152 (57.89%), Postives = 98/152 (64.47%), Query Frame = 1


Query: 1   MAAQQ-ERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEM 60
           MA++Q  R EL+ KAKQGETVVPGGTGG SLEAQE LAEGRS+GGQTRKEQLG+EGYQE+
Sbjct: 1   MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query: 61  GHRGGETRREQMGQEGYQEMGKK------------------------------------- 112
           GH+GGE R+EQ+G EGYQEMG K                                     
Sbjct: 61  GHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHEGYKEM 120

[Close]

BLAST of CmaCh03G003410 vs. TAIR10
Match: AT2G40170.1 (AT2G40170.1 Stress induced protein)

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-28
Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQE+ +L+ +AK+GETVVPGGTGGKS EAQ+ LAEGRSRGGQTRKEQL         
Sbjct: 1   MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQL--------- 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
                      G EGYQ+MG+KGGLST DK   E  EEEG+EIDESKFRTK
Sbjct: 61  -----------GTEGYQQMGRKGGLSTGDKPGGEHAEEEGVEIDESKFRTK 91

[Close]

BLAST of CmaCh03G003410 vs. NCBI nr
Match: gi|659128448|ref|XP_008464211.1| (PREDICTED: late embryogenesis abundant protein B19.3 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 6.7e-43
Identity = 95/113 (84.07%), Postives = 108/113 (95.58%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RSEL+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGY+E+G
Sbjct: 1   MASQQQRSELDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYEELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE R+EQMGQEGYQEMG+KGGLSTMDKS  ER EEEGIEIDES+F TK+R
Sbjct: 61  HQGGEARKEQMGQEGYQEMGRKGGLSTMDKSGGERAEEEGIEIDESRFTTKNR 113

[Close]

BLAST of CmaCh03G003410 vs. NCBI nr
Match: gi|778697683|ref|XP_004148634.2| (PREDICTED: protein SLE1 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 96/113 (84.96%), Postives = 107/113 (94.69%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ+RS L+AKAKQGETVVPGGTGGKSL+AQERLAEGRS+GGQTRKEQLG+EGYQE+G
Sbjct: 1   MASQQQRSALDAKAKQGETVVPGGTGGKSLDAQERLAEGRSKGGQTRKEQLGHEGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTKDR 114
           H+GGE RREQMGQEGY+EMG+KGGLSTMDKS  ERVEEEGIEIDESKF  K+R
Sbjct: 61  HQGGEARREQMGQEGYKEMGRKGGLSTMDKSGGERVEEEGIEIDESKFTNKNR 113

[Close]

BLAST of CmaCh03G003410 vs. NCBI nr
Match: gi|802761577|ref|XP_012089824.1| (PREDICTED: protein SLE1 [Jatropha curcas])

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-40
Identity = 90/111 (81.08%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA +QER+EL+A+A+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTR+EQLG EGY+E+G
Sbjct: 1   MATEQERAELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYKELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRTK 112
           HRGGETRREQ+G EGYQEMG+KGGLSTMDKS  ER  EEGIEIDESK++T+
Sbjct: 61  HRGGETRREQIGHEGYQEMGRKGGLSTMDKSGEERAAEEGIEIDESKYKTR 111

[Close]

BLAST of CmaCh03G003410 vs. NCBI nr
Match: gi|823175822|ref|XP_012486242.1| (PREDICTED: protein SLE1-like [Gossypium raimondii])

HSP 1 Score: 168.3 bits (425), Expect = 7.6e-39
Identity = 88/110 (80.00%), Postives = 101/110 (91.82%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQER EL+A+A+QGETV+PGGTGGKSLEAQE LAEGRSRGGQTRKEQLG EGYQE+G
Sbjct: 1   MASQQERQELDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGREGYQELG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRT 111
            +GG+TR+EQ+G EGYQEMG+KGGLSTMDKS  ER  EEGI+IDESK+RT
Sbjct: 61  SKGGQTRKEQIGSEGYQEMGRKGGLSTMDKSGGERAAEEGIDIDESKYRT 110

[Close]

BLAST of CmaCh03G003410 vs. NCBI nr
Match: gi|641837755|gb|KDO56705.1| (hypothetical protein CISIN_1g040090mg [Citrus sinensis])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1


Query: 1   MAAQQERSELEAKAKQGETVVPGGTGGKSLEAQERLAEGRSRGGQTRKEQLGYEGYQEMG 60
           MA+QQ R EL+ +A+QGETVVPGGTGGKSLEAQE LAEGRSRGGQTR+EQLG EGYQEMG
Sbjct: 1   MASQQGRKELDTRARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMG 60

Query: 61  HRGGETRREQMGQEGYQEMGKKGGLSTMDKSASERVEEEGIEIDESKFRT 111
           HRGG+ RREQMG EGYQEMG+KGGLST+DKS  ER  EEGIEIDESK++T
Sbjct: 61  HRGGQMRREQMGSEGYQEMGRKGGLSTIDKSGGERAAEEGIEIDESKYKT 110

The following BLAST results are available for this feature:

BLAST of CmaCh03G003410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EML_DAUCA	4.5e-39	77.27	Carrot ABA-induced in somatic embryos 3 OS=Daucus carota GN=CAISE3 PE=2 SV=1	[more]
SLE1_SOYBN	7.6e-39	81.13	Protein SLE1 OS=Glycine max GN=SLE1 PE=2 SV=1	[more]
LE193_HORVU	1.0e-35	65.38	Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare GN=B19.3 PE=2 SV=1	[more]
EM1_ARATH	6.3e-33	57.89	Em-like protein GEA1 OS=Arabidopsis thaliana GN=EM1 PE=2 SV=1	[more]
LE194_HORVU	1.1e-32	56.00	Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare GN=B19.4 PE=2 SV=1	[more]

BLAST of CmaCh03G003410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZY8_CUCSA	7.9e-43	84.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G311730 PE=4 SV=1	[more]
A0A067JS88_JATCU	3.7e-40	81.08	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00457 PE=4 SV=1	[more]
A0A0D2QCE0_GOSRA	5.3e-39	80.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G183600 PE=4 SV=1	[more]
A0A067ES79_CITSI	6.9e-39	80.91	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040090mg PE=4 SV=1	[more]
I1HKD9_BRADI	1.2e-38	79.28	Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1	[more]

BLAST of CmaCh03G003410 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51810.1	3.5e-34	57.89	Stress induced protein	[more]
AT2G40170.1	3.8e-28	63.06	Stress induced protein	[more]

BLAST of CmaCh03G003410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128448\|ref\|XP_008464211.1\|	6.7e-43	84.07	PREDICTED: late embryogenesis abundant protein B19.3 [Cucumis melo]	[more]
gi\|778697683\|ref\|XP_004148634.2\|	1.1e-42	84.96	PREDICTED: protein SLE1 [Cucumis sativus]	[more]
gi\|802761577\|ref\|XP_012089824.1\|	5.3e-40	81.08	PREDICTED: protein SLE1 [Jatropha curcas]	[more]
gi\|823175822\|ref\|XP_012486242.1\|	7.6e-39	80.00	PREDICTED: protein SLE1-like [Gossypium raimondii]	[more]
gi\|641837755\|gb\|KDO56705.1\|	1.0e-38	80.91	hypothetical protein CISIN_1g040090mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000389	Small_hydrophilic_seed_prot
IPR022377	Sm_Hydphi_plant_seed_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G003410.1	CmaCh03G003410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000389	Small hydrophilic plant seed protein	PANTHER	PTHR34671	FAMILY NOT NAMED	coord: 1..113 score: 3.0
IPR022377	Small hydrophilic plant seed protein, conserved site	PROSITE	PS00431	SMALL_HYDR_PLANT_SEED	coord: 17..25 scor
None	No IPR available	PANTHER	PTHR34671:SF1	EM-LIKE PROTEIN GEA6	coord: 1..113 score: 3.0
None	No IPR available	PFAM	PF00477	LEA_5	coord: 3..108 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G003410	Cucsa.067320	Cucumber (Gy14) v1	cgycmaB0105
CmaCh03G003410	Cla018093	Watermelon (97103) v1	cmawmB633
CmaCh03G003410	Csa4G311230	Cucumber (Chinese Long) v2	cmacuB668
CmaCh03G003410	MELO3C026002	Melon (DHL92) v3.5.1	cmameB610
CmaCh03G003410	ClCG04G006910	Watermelon (Charleston Gray)	cmawcgB585
CmaCh03G003410	CSPI04G15980	Wild cucumber (PI 183967)	cmacpiB677
CmaCh03G003410	CmoCh03G003540	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G003410	Lsi01G015550	Bottle gourd (USVL1VR-Ls)	cmalsiB601
CmaCh03G003410	Cp4.1LG10g07790	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G003410	MELO3C026002.2	Melon (DHL92) v3.6.1	cmamedB693
CmaCh03G003410	CsaV3_4G026350	Cucumber (Chinese Long) v3	cmacucB0797
CmaCh03G003410	Cla97C04G073530	Watermelon (97103) v2	cmawmbB684
CmaCh03G003410	Bhi03G001695	Wax gourd	cmawgoB0799
CmaCh03G003410	CsGy4G015280	Cucumber (Gy14) v2	cgybcmaB533
CmaCh03G003410	Carg20005	Silver-seed gourd	carcmaB0775

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G003410	Cucumber (Gy14) v2	cgybcmaB404
CmaCh03G003410	Cucumber (Gy14) v2	cgybcmaB832
CmaCh03G003410	Melon (DHL92) v3.6.1	cmamedB682
CmaCh03G003410	Melon (DHL92) v3.6.1	cmamedB687
CmaCh03G003410	Silver-seed gourd	carcmaB0210
CmaCh03G003410	Silver-seed gourd	carcmaB0366
CmaCh03G003410	Silver-seed gourd	carcmaB1384
CmaCh03G003410	Cucumber (Chinese Long) v3	cmacucB0785
CmaCh03G003410	Cucumber (Chinese Long) v3	cmacucB0811
CmaCh03G003410	Watermelon (97103) v2	cmawmbB675
CmaCh03G003410	Watermelon (97103) v2	cmawmbB676
CmaCh03G003410	Wax gourd	cmawgoB0779
CmaCh03G003410	Cucurbita maxima (Rimu)	cmacmaB268
CmaCh03G003410	Cucurbita maxima (Rimu)	cmacmaB515
CmaCh03G003410	Cucurbita maxima (Rimu)	cmacmaB520
CmaCh03G003410	Cucurbita maxima (Rimu)	cmacmaB529
CmaCh03G003410	Cucumber (Gy14) v1	cgycmaB0373
CmaCh03G003410	Cucumber (Gy14) v1	cgycmaB0503
CmaCh03G003410	Cucurbita moschata (Rifu)	cmacmoB639
CmaCh03G003410	Cucurbita moschata (Rifu)	cmacmoB659
CmaCh03G003410	Cucurbita moschata (Rifu)	cmacmoB664
CmaCh03G003410	Cucurbita moschata (Rifu)	cmacmoB673
CmaCh03G003410	Wild cucumber (PI 183967)	cmacpiB665
CmaCh03G003410	Wild cucumber (PI 183967)	cmacpiB690
CmaCh03G003410	Cucumber (Chinese Long) v2	cmacuB657
CmaCh03G003410	Cucumber (Chinese Long) v2	cmacuB682
CmaCh03G003410	Melon (DHL92) v3.5.1	cmameB598
CmaCh03G003410	Melon (DHL92) v3.5.1	cmameB604
CmaCh03G003410	Watermelon (Charleston Gray)	cmawcgB575
CmaCh03G003410	Watermelon (Charleston Gray)	cmawcgB574
CmaCh03G003410	Watermelon (97103) v1	cmawmB615
CmaCh03G003410	Watermelon (97103) v1	cmawmB648
CmaCh03G003410	Cucurbita pepo (Zucchini)	cmacpeB668
CmaCh03G003410	Cucurbita pepo (Zucchini)	cmacpeB680
CmaCh03G003410	Cucurbita pepo (Zucchini)	cmacpeB691
CmaCh03G003410	Bottle gourd (USVL1VR-Ls)	cmalsiB610
CmaCh03G003410	Bottle gourd (USVL1VR-Ls)	cmalsiB612