CmaCh03G003200 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G003200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMacrophage migration inhibitory factor like
LocationCma_Chr03 : 4033310 .. 4033794 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTCTCTAAACTCCTCCTTCTCTCTCCTCTCCATAATAATCCCCATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCTGCCACAACCTCCGCCGTCTCCTCCATTATCGGCAAACCCGAGAATGTAAACCATACTTTGTCTTCCATTACAGTCGACGCCTCTATTATATTTATCTTTTATTATTATAGACAAATATTCTTAATTTATTTTGTTTTTTTGGACAGTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCATTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACCATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCTGCGAGATTCGTTCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

mRNA sequence

CCCTCTCTAAACTCCTCCTTCTCTCTCCTCTCCATAATAATCCCCATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCTGCCACAACCTCCGCCGTCTCCTCCATTATCGGCAAACCCGAGAATTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCATTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACCATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCTGCGAGATTCGTTCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

Coding sequence (CDS)

ATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCTGCCACAACCTCCGCCGTCTCCTCCATTATCGGCAAACCCGAGAATTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCATTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACCATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCTGCGAGATTCGTTCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

Protein sequence

MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAFAEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL
Homology
[Close]
BLAST of CmaCh03G003200 vs. Swiss-Prot
Match: MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-08
Identity = 34/102 (33.33%), Postives = 52/102 (50.98%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP    STNV      S     +T+  ++ ++GKPE+YV V + G   I+FGG   PA F
Sbjct: 1   MPIFTFSTNVPSENI-SVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHD 103
            +++S+GG+  E  R   A +   L + L +P  R  +   D
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVD 101

[Close]
BLAST of CmaCh03G003200 vs. Swiss-Prot
Match: MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-06
Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 1 

Query: 1  MPCLYISTNVDLAGADSAAIFAATTSA-VSSIIGKPENYVMVLLKGSVAISFGGNKEPAA 60
          MP   ++TN+     D  + F ++TSA V +I+ KP +YV V +     +SFGG+ +PAA
Sbjct: 1  MPIFTLNTNIK--ATDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAA 60

Query: 61 FAEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVL 99
          F  ++S+GGI     R   A +   L +KL +P  R  +
Sbjct: 61 FGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97

[Close]
BLAST of CmaCh03G003200 vs. Swiss-Prot
Match: MIFH_BRUMA (Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 51.2 bits (121), Expect = 8.4e-06
Identity = 30/105 (28.57%), Postives = 55/105 (52.38%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   I TN+    + S+A     ++ V+  +GKPE+YV + + G  A+ FGG+++P A 
Sbjct: 1   MPYFTIDTNIP-QNSISSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTA 106
             + S+G +  +V       +  +L ++L +P  R  ++  D  A
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEA 104

[Close]
BLAST of CmaCh03G003200 vs. TrEMBL
Match: A0A0A0L1F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G314440 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-45
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSA IF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of CmaCh03G003200 vs. TrEMBL
Match: A0A059A6Q7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02948 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.0e-38
Identity = 83/112 (74.11%), Postives = 101/112 (90.18%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV L G D+  IF+  T AV+SIIG+PEN+VMV+LKGS+AISFGGNKEPAA+
Sbjct: 1   MPCLYISTNVCLDGVDADPIFSEATKAVASIIGRPENFVMVILKGSLAISFGGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE++SMGGI+SEVK++LIATIG+IL+EKLS+P  RF+LKV+DTTAGR VSKL
Sbjct: 61  AEIISMGGIDSEVKKKLIATIGTILQEKLSIPRTRFILKVYDTTAGRKVSKL 112

[Close]
BLAST of CmaCh03G003200 vs. TrEMBL
Match: D7SR56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00590 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-35
Identity = 81/112 (72.32%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPC+ ISTNV+L G D+  IF+  T AV+SIIGKPENYVMVLLKGSVAISF GNKEPAAF
Sbjct: 1   MPCVDISTNVNLEGVDADPIFSDVTKAVASIIGKPENYVMVLLKGSVAISFEGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE++SMGGINSEVKR+LIATIG+IL+ KLS+P  RF LKV+DTT    ++KL
Sbjct: 61  AEIISMGGINSEVKRKLIATIGTILQTKLSIPRTRFFLKVYDTTMAHKIAKL 112

[Close]
BLAST of CmaCh03G003200 vs. TrEMBL
Match: A0A061ERQ9_THECC (Tautomerase/MIF superfamily protein OS=Theobroma cacao GN=TCM_021591 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-35
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTN++L   D+  IF+ TT AV+SIIGKPEN+VMV+LKGSVAISF GNK+PAA+
Sbjct: 1   MPCLYISTNLNLDEVDTGPIFSETTKAVASIIGKPENFVMVILKGSVAISFNGNKDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGIN EVKR+LIAT+G+IL+  LS+P  RF LKV+DTTAG  +SK+
Sbjct: 61  AEVVSMGGINREVKRKLIATLGTILENMLSIPRTRFFLKVYDTTAGLKISKI 112

[Close]
BLAST of CmaCh03G003200 vs. TrEMBL
Match: B9SL17_RICCO (Light-inducible protein atls1, putative OS=Ricinus communis GN=RCOM_0848460 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.7e-34
Identity = 75/107 (70.09%), Postives = 93/107 (86.92%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+L G D+  IF+  T AV++IIGKPE++VMV+LKGSV ISF GNKEPAA+
Sbjct: 1   MPCLYISTNVNLDGVDTDPIFSEATKAVATIIGKPEHFVMVILKGSVGISFNGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGR 108
           AEVVSMGGIN EVKR LI+T+G++L+ +LS+P ARF LKV+DTTAG+
Sbjct: 61  AEVVSMGGINREVKRNLISTLGTVLENRLSIPRARFFLKVYDTTAGQ 107

[Close]
BLAST of CmaCh03G003200 vs. TAIR10
Match: AT3G51660.1 (AT3G51660.1 Tautomerase/MIF superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 3.4e-29
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYI+TNV+  G ++   ++  T AV+SI+G+P+N VMV+LKGSV I FGGNKE AA+
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE+VSMGGI  +VKR LIAT+GSIL    S+ P RF+ KV D  +    SKL
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPLPSKL 112

[Close]
BLAST of CmaCh03G003200 vs. TAIR10
Match: AT5G01650.2 (AT5G01650.2 Tautomerase/MIF superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-28
Identity = 58/103 (56.31%), Postives = 84/103 (81.55%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCL +STNV+L G D+++I +  +S V+ IIGKPENYVM++LKGSV +SFGG ++PAA+
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDT 104
            E+VS+GG+N++V ++L A + +IL+ KLSVP +RF LK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]
BLAST of CmaCh03G003200 vs. TAIR10
Match: AT5G57170.2 (AT5G57170.2 Tautomerase/MIF superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 3.5e-18
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP L + TN+ +     + I    T AV+ IIGKPE+YVM+LL   V I+F G +EPAA+
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
            E++S+GG+   V  +L  TI  IL+ KLS+  +RF +K +D+    PVS L
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS----PVSPL 108

[Close]
BLAST of CmaCh03G003200 vs. NCBI nr
Match: gi|659128505|ref|XP_008464238.1| (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSAAIF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of CmaCh03G003200 vs. NCBI nr
Match: gi|449461739|ref|XP_004148599.1| (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSA IF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARF LKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of CmaCh03G003200 vs. NCBI nr
Match: gi|702498295|ref|XP_010037667.1| (PREDICTED: macrophage migration inhibitory factor homolog [Eucalyptus grandis])

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-38
Identity = 83/112 (74.11%), Postives = 101/112 (90.18%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV L G D+  IF+  T AV+SIIG+PEN+VMV+LKGS+AISFGGNKEPAA+
Sbjct: 1   MPCLYISTNVCLDGVDADPIFSEATKAVASIIGRPENFVMVILKGSLAISFGGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE++SMGGI+SEVK++LIATIG+IL+EKLS+P  RF+LKV+DTTAGR VSKL
Sbjct: 61  AEIISMGGIDSEVKKKLIATIGTILQEKLSIPRTRFILKVYDTTAGRKVSKL 112

[Close]
BLAST of CmaCh03G003200 vs. NCBI nr
Match: gi|1009158693|ref|XP_015897419.1| (PREDICTED: macrophage migration inhibitory factor homolog [Ziziphus jujuba])

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 82/112 (73.21%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+L G D+ +IF+  T AVS+IIGKPEN+VMV+L GSVAISFGGNK+PAA+
Sbjct: 1   MPCLYISTNVNLDGVDTDSIFSEATKAVSTIIGKPENFVMVILNGSVAISFGGNKDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE+VSMGGINS VK+ LIAT+G+IL  KLSVP  RF LKV DTTAGR  SKL
Sbjct: 61  AEIVSMGGINSAVKKDLIATLGTILHAKLSVPRTRFFLKVFDTTAGRTNSKL 112

[Close]
BLAST of CmaCh03G003200 vs. NCBI nr
Match: gi|225439552|ref|XP_002264120.1| (PREDICTED: macrophage migration inhibitory factor homolog [Vitis vinifera])

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-35
Identity = 81/112 (72.32%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPC+ ISTNV+L G D+  IF+  T AV+SIIGKPENYVMVLLKGSVAISF GNKEPAAF
Sbjct: 1   MPCVDISTNVNLEGVDADPIFSDVTKAVASIIGKPENYVMVLLKGSVAISFEGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 113
           AE++SMGGINSEVKR+LIATIG+IL+ KLS+P  RF LKV+DTT    ++KL
Sbjct: 61  AEIISMGGINSEVKRKLIATIGTILQTKLSIPRTRFFLKVYDTTMAHKIAKL 112

The following BLAST results are available for this feature:
BLAST of CmaCh03G003200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIFH_TRITR6.9e-0833.33Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2[more]
MIFH_TRISP1.0e-0635.35Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2[more]
MIFH_BRUMA8.4e-0628.57Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=Bm1_28435 PE=... [more]
BLAST of CmaCh03G003200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1F7_CUCSA1.7e-4587.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G314440 PE=4 SV=1[more]
A0A059A6Q7_EUCGR2.0e-3874.11Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02948 PE=4 SV=1[more]
D7SR56_VITVI1.2e-3572.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00590 PE=4 SV=... [more]
A0A061ERQ9_THECC1.6e-3570.54Tautomerase/MIF superfamily protein OS=Theobroma cacao GN=TCM_021591 PE=4 SV=1[more]
B9SL17_RICCO6.7e-3470.09Light-inducible protein atls1, putative OS=Ricinus communis GN=RCOM_0848460 PE=4... [more]
BLAST of CmaCh03G003200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51660.13.4e-2957.14 Tautomerase/MIF superfamily protein[more]
AT5G01650.21.3e-2856.31 Tautomerase/MIF superfamily protein[more]
AT5G57170.23.5e-1843.75 Tautomerase/MIF superfamily protein[more]
BLAST of CmaCh03G003200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128505|ref|XP_008464238.1|1.9e-4587.50PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo][more]
gi|449461739|ref|XP_004148599.1|2.4e-4587.50PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus][more]
gi|702498295|ref|XP_010037667.1|2.9e-3874.11PREDICTED: macrophage migration inhibitory factor homolog [Eucalyptus grandis][more]
gi|1009158693|ref|XP_015897419.1|1.3e-3573.21PREDICTED: macrophage migration inhibitory factor homolog [Ziziphus jujuba][more]
gi|225439552|ref|XP_002264120.1|1.7e-3572.32PREDICTED: macrophage migration inhibitory factor homolog [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001398Macrophage_inhib_fac
IPR014347Tautomerase/MIF_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0006558 L-phenylalanine metabolic process
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005777 peroxisome
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0050178 phenylpyruvate tautomerase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G003200.1CmaCh03G003200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001398Macrophage migration inhibitory factorPRODOMPD004816coord: 18..103
score: 3.0
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954MACROPHAGE MIGRATION INHIBITORY FACTOR RELATEDcoord: 2..105
score: 7.5
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 2..105
score: 1.8
IPR014347Tautomerase/MIF superfamilyunknownSSF55331Tautomerase/MIFcoord: 1..104
score: 1.06
NoneNo IPR availableGENE3DG3DSA:3.30.429.10coord: 1..104
score: 1.1
NoneNo IPR availablePANTHERPTHR11954:SF25LS1-LIKE PROTEINcoord: 2..105
score: 7.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G003200Cucsa.130240Cucumber (Gy14) v1cgycmaB0354
CmaCh03G003200Cla012004Watermelon (97103) v1cmawmB633
CmaCh03G003200Csa4G314430Cucumber (Chinese Long) v2cmacuB668
CmaCh03G003200MELO3C026028Melon (DHL92) v3.5.1cmameB610
CmaCh03G003200ClCG04G006660Watermelon (Charleston Gray)cmawcgB585
CmaCh03G003200CSPI04G16230Wild cucumber (PI 183967)cmacpiB677
CmaCh03G003200CmoCh07G012880Cucurbita moschata (Rifu)cmacmoB668
CmaCh03G003200CmoCh03G003320Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G003200Lsi01G015850Bottle gourd (USVL1VR-Ls)cmalsiB601
CmaCh03G003200Cp4.1LG10g07750Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G003200Cp4.1LG19g01360Cucurbita pepo (Zucchini)cmacpeB672
CmaCh03G003200MELO3C026028.2Melon (DHL92) v3.6.1cmamedB693
CmaCh03G003200CsaV3_4G026740Cucumber (Chinese Long) v3cmacucB0795
CmaCh03G003200Cla97C04G073260Watermelon (97103) v2cmawmbB684
CmaCh03G003200Bhi03G001726Wax gourdcmawgoB0799
CmaCh03G003200CsGy4G015530Cucumber (Gy14) v2cgybcmaB533
CmaCh03G003200Carg20021Silver-seed gourdcarcmaB0775
CmaCh03G003200Carg12675Silver-seed gourdcarcmaB0396
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh03G003200CmaCh07G012420Cucurbita maxima (Rimu)cmacmaB524
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G003200Cucumber (Chinese Long) v3cmacucB0785
CmaCh03G003200Cucumber (Chinese Long) v3cmacucB0797
CmaCh03G003200Cucumber (Chinese Long) v3cmacucB0811
CmaCh03G003200Watermelon (97103) v2cmawmbB675
CmaCh03G003200Watermelon (97103) v2cmawmbB676
CmaCh03G003200Wax gourdcmawgoB0774
CmaCh03G003200Wax gourdcmawgoB0779
CmaCh03G003200Cucurbita maxima (Rimu)cmacmaB268
CmaCh03G003200Cucurbita maxima (Rimu)cmacmaB515
CmaCh03G003200Cucurbita maxima (Rimu)cmacmaB520
CmaCh03G003200Cucumber (Gy14) v1cgycmaB0503
CmaCh03G003200Cucurbita moschata (Rifu)cmacmoB639
CmaCh03G003200Cucurbita moschata (Rifu)cmacmoB642
CmaCh03G003200Cucurbita moschata (Rifu)cmacmoB659
CmaCh03G003200Cucurbita moschata (Rifu)cmacmoB664
CmaCh03G003200Wild cucumber (PI 183967)cmacpiB665
CmaCh03G003200Wild cucumber (PI 183967)cmacpiB690
CmaCh03G003200Cucumber (Chinese Long) v2cmacuB657
CmaCh03G003200Cucumber (Chinese Long) v2cmacuB682
CmaCh03G003200Melon (DHL92) v3.5.1cmameB604
CmaCh03G003200Watermelon (Charleston Gray)cmawcgB575
CmaCh03G003200Watermelon (Charleston Gray)cmawcgB574
CmaCh03G003200Watermelon (97103) v1cmawmB615
CmaCh03G003200Watermelon (97103) v1cmawmB648
CmaCh03G003200Cucurbita pepo (Zucchini)cmacpeB680
CmaCh03G003200Cucurbita pepo (Zucchini)cmacpeB691
CmaCh03G003200Bottle gourd (USVL1VR-Ls)cmalsiB610
CmaCh03G003200Bottle gourd (USVL1VR-Ls)cmalsiB612
CmaCh03G003200Cucumber (Gy14) v2cgybcmaB404
CmaCh03G003200Cucumber (Gy14) v2cgybcmaB832
CmaCh03G003200Melon (DHL92) v3.6.1cmamedB687
CmaCh03G003200Silver-seed gourdcarcmaB0210
CmaCh03G003200Silver-seed gourdcarcmaB0366
CmaCh03G003200Silver-seed gourdcarcmaB1384