Carg20021 (gene) Silver-seed gourd

Overview
NameCarg20021
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionmacrophage migration inhibitory factor homolog
LocationCucurbita_argyrosperma_scaffold_167 : 487608 .. 488064 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCCGCCACAACCTCCGCCGTCTCCTCAATTATAGGCAAACCCGAGAATGTAAACCATACTCTCTCTCTCTATATATATATAATATTGATATTTGTCTTCCATTACAGCTTACCGATGCATTGGTTTTAGTAAATATTCTTAATTTATTTTGTTTTTTTTTGGACAGTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCGTTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACGATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

mRNA sequence

ATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCCGCCACAACCTCCGCCGTCTCCTCAATTATAGGCAAACCCGAGAATTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCGTTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACGATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

Coding sequence (CDS)

ATGCCTTGCCTTTACATCTCCACCAACGTCGATCTCGCCGGAGCCGACTCCGCCGCCATCTTCGCCGCCACAACCTCCGCCGTCTCCTCAATTATAGGCAAACCCGAGAATTATGTTATGGTGTTGTTGAAAGGGTCGGTGGCGATATCGTTCGGGGGGAACAAGGAACCGGCGGCGTTTGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTAAAGAGGCGGCTGATCGCCACGATTGGAAGCATTTTGAAGGAGAAGCTGTCAGTTCCGCCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCGGGTCGCCCCGTTTCAAAATTATGA

Protein sequence

MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAFAEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL
Homology
[Close]
BLAST of Carg20021 vs. NCBI nr
Match: XP_022949815.1 (macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_023543101.1 macrophage migration inhibitory factor homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 5.2e-52
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 112

[Close]
BLAST of Carg20021 vs. NCBI nr
Match: XP_022978322.1 (macrophage migration inhibitory factor homolog [Cucurbita maxima])

HSP 1 Score: 210.3 bits (534), Expect = 3.4e-51
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARF LKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 112

[Close]
BLAST of Carg20021 vs. NCBI nr
Match: XP_022144090.1 (macrophage migration inhibitory factor homolog [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 99/112 (88.39%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNVDLAGAD+AAIF+ATT+AVSSIIGKPEN+VMVLLKGSVAISFGGN EPAAF
Sbjct: 1   MPCLYISTNVDLAGADTAAIFSATTTAVSSIIGKPENFVMVLLKGSVAISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINS+VKR LI+TI +IL +KLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSQVKRNLISTIAAILNDKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Carg20021 vs. NCBI nr
Match: XP_008464238.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSAAIF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Carg20021 vs. NCBI nr
Match: XP_004148599.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN54417.1 hypothetical protein Csa_4G314440 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 4.3e-46
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSA IF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Carg20021 vs. TAIR10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-29
Identity = 59/103 (57.28%), Postives = 85/103 (82.52%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCL +STNV+L G D+++I +  +S V+ IIGKPENYVM++LKGSV +SFGG ++PAA+
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDT 104
            E+VS+GG+N++V ++L A + +IL+ KLSVP +RFFLK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]
BLAST of Carg20021 vs. TAIR10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 4.4e-29
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYI+TNV+  G ++   ++  T AV+SI+G+P+N VMV+LKGSV I FGGNKE AA+
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AE+VSMGGI  +VKR LIAT+GSIL    S+ P RF  KV D  +    SKL
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPLPSKL 112

[Close]
BLAST of Carg20021 vs. TAIR10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 7.1e-19
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP L + TN+ +     + I    T AV+ IIGKPE+YVM+LL   V I+F G +EPAA+
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
            E++S+GG+   V  +L  TI  IL+ KLS+  +RF++K +D+    PVS L
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS----PVSPL 108

[Close]
BLAST of Carg20021 vs. Swiss-Prot
Match: sp|P81748|MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08
Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP    STNV      S     +T+  ++ ++GKPE+YV V + G   I+FGG   PA F
Sbjct: 1   MPIFTFSTNVPSENI-SVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHD 103
            +++S+GG+  E  R   A +   L + L +P  R ++   D
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVD 101

[Close]
BLAST of Carg20021 vs. Swiss-Prot
Match: sp|P81529|MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 0 

Query: 1  MPCLYISTNVDLAGADSAAIFAATTSA-VSSIIGKPENYVMVLLKGSVAISFGGNKEPAA 60
          MP   ++TN+     D  + F ++TSA V +I+ KP +YV V +     +SFGG+ +PAA
Sbjct: 1  MPIFTLNTNI--KATDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAA 60

Query: 61 FAEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFL 99
          F  ++S+GGI     R   A +   L +KL +P  R ++
Sbjct: 61 FGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97

[Close]
BLAST of Carg20021 vs. Swiss-Prot
Match: sp|P91850|MIFH_BRUMA (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 30/105 (28.57%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   I TN+    + S+A     ++ V+  +GKPE+YV + + G  A+ FGG+++P A 
Sbjct: 1   MPYFTIDTNIP-QNSISSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTA 106
             + S+G +  +V       +  +L ++L +P  R +++  D  A
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEA 104

[Close]
BLAST of Carg20021 vs. Swiss-Prot
Match: sp|P80177|MIF_BOVIN (Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-05
Identity = 29/105 (27.62%), Postives = 48/105 (45.71%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   ++TNV  A      + +  T  ++   GKP  Y+ V +     ++FGG+ EP A 
Sbjct: 1   MPMFVVNTNVPRASVPD-GLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTA 106
             + S+G I     R     +  +L E+L + P R ++   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]
BLAST of Carg20021 vs. Swiss-Prot
Match: sp|Q1ZZU7|MIF_SHEEP (Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-05
Identity = 29/105 (27.62%), Postives = 48/105 (45.71%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MP   ++TNV  A      + +  T  ++   GKP  Y+ V +     ++FGG+ EP A 
Sbjct: 1   MPMFVVNTNVPRASVPD-GLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTA 106
             + S+G I     R     +  +L E+L + P R ++   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]
BLAST of Carg20021 vs. TrEMBL
Match: tr|A0A1S3CL09|A0A1S3CL09_CUCME (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103502168 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-46
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSAAIF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Carg20021 vs. TrEMBL
Match: tr|A0A0A0L1F7|A0A0A0L1F7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.8e-46
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV+LAG DSA IF+ATT+AVSSIIGKPENYVMVLL GSV ISFGGN +PAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKRRLI+T+GSIL EKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Carg20021 vs. TrEMBL
Match: tr|A0A059A6Q7|A0A059A6Q7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02948 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.8e-38
Identity = 83/112 (74.11%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV L G D+  IF+  T AV+SIIG+PEN+VMV+LKGS+AISFGGNKEPAA+
Sbjct: 1   MPCLYISTNVCLDGVDADPIFSEATKAVASIIGRPENFVMVILKGSLAISFGGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AE++SMGGI+SEVK++LIATIG+IL+EKLS+P  RF LKV+DTTAGR VSKL
Sbjct: 61  AEIISMGGIDSEVKKKLIATIGTILQEKLSIPRTRFILKVYDTTAGRKVSKL 112

[Close]
BLAST of Carg20021 vs. TrEMBL
Match: tr|A0A2I4H5E2|A0A2I4H5E2_9ROSI (macrophage migration inhibitory factor homolog OS=Juglans regia OX=51240 GN=LOC109013656 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-36
Identity = 80/112 (71.43%), Postives = 95/112 (84.82%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPCLYISTNV L G D+  IF+  T A+S+IIGKPENYVMV+LKGS+ ISF GNKEPAA+
Sbjct: 1   MPCLYISTNVSLDGVDTNPIFSEATKAISNIIGKPENYVMVILKGSLEISFEGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
            E+VSMGGINSEVK++LIATIG+IL+ KL +P  RFFLKV+DTTAGR  SK+
Sbjct: 61  GEIVSMGGINSEVKKKLIATIGTILESKLCIPRTRFFLKVYDTTAGRNYSKI 112

[Close]
BLAST of Carg20021 vs. TrEMBL
Match: tr|D7SR56|D7SR56_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0058g00590 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-36
Identity = 82/112 (73.21%), Postives = 96/112 (85.71%), Query Frame = 0 

Query: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60
           MPC+ ISTNV+L G D+  IF+  T AV+SIIGKPENYVMVLLKGSVAISF GNKEPAAF
Sbjct: 1   MPCVDISTNVNLEGVDADPIFSDVTKAVASIIGKPENYVMVLLKGSVAISFEGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AE++SMGGINSEVKR+LIATIG+IL+ KLS+P  RFFLKV+DTT    ++KL
Sbjct: 61  AEIISMGGINSEVKRKLIATIGTILQTKLSIPRTRFFLKVYDTTMAHKIAKL 112

The following BLAST results are available for this feature:
BLAST of Carg20021 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949815.15.2e-52100.00macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_02354310... [more]
XP_022978322.13.4e-5199.11macrophage migration inhibitory factor homolog [Cucurbita maxima][more]
XP_022144090.12.5e-4688.39macrophage migration inhibitory factor homolog [Momordica charantia][more]
XP_008464238.13.3e-4688.39PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo][more]
XP_004148599.14.3e-4688.39PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN... [more]
BLAST of Carg20021 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01650.21.2e-2957.28Tautomerase/MIF superfamily protein[more]
AT3G51660.14.4e-2957.14Tautomerase/MIF superfamily protein[more]
AT5G57170.27.1e-1943.75Tautomerase/MIF superfamily protein[more]
BLAST of Carg20021 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P81748|MIFH_TRITR1.8e-0833.33Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P... [more]
sp|P81529|MIFH_TRISP3.5e-0735.35Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 P... [more]
sp|P91850|MIFH_BRUMA2.3e-0628.57Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2... [more]
sp|P80177|MIF_BOVIN5.6e-0527.62Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6[more]
sp|Q1ZZU7|MIF_SHEEP5.6e-0527.62Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1[more]
BLAST of Carg20021 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CL09|A0A1S3CL09_CUCME2.2e-4688.39macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0L1F7|A0A0A0L1F7_CUCSA2.8e-4688.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=4 SV=1[more]
tr|A0A059A6Q7|A0A059A6Q7_EUCGR4.8e-3874.11Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02948 PE=4 SV... [more]
tr|A0A2I4H5E2|A0A2I4H5E2_9ROSI2.0e-3671.43macrophage migration inhibitory factor homolog OS=Juglans regia OX=51240 GN=LOC1... [more]
tr|D7SR56|D7SR56_VITVI2.0e-3673.21Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0058g00590 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001398Macrophage_inhib_fac
IPR014347Tautomerase/MIF_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20021-RACarg20021-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014347Tautomerase/MIF superfamilyGENE3DG3DSA:3.30.429.10coord: 2..102
e-value: 1.3E-29
score: 104.5
IPR014347Tautomerase/MIF superfamilySUPERFAMILYSSF55331Tautomerase/MIFcoord: 1..104
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 2..105
e-value: 3.6E-13
score: 49.7
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954MACROPHAGE MIGRATION INHIBITORY FACTOR RELATEDcoord: 1..112
IPR001398Macrophage migration inhibitory factorPRODOMPD004816coord: 18..103
e-value: 6.0E-24
score: 269.0
NoneNo IPR availablePANTHERPTHR11954:SF25LS1-LIKE PROTEINcoord: 1..112

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20021Cla012004Watermelon (97103) v1carwmB0554
Carg20021Csa4G314430Cucumber (Chinese Long) v2carcuB0585
Carg20021MELO3C026028Melon (DHL92) v3.5.1carmeB0562
Carg20021ClCG04G006660Watermelon (Charleston Gray)carwcgB0542
Carg20021CSPI04G16230Wild cucumber (PI 183967)carcpiB0591
Carg20021Cucsa.130240Cucumber (Gy14) v1carcgyB0633
Carg20021CmaCh03G003200Cucurbita maxima (Rimu)carcmaB0775
Carg20021CmoCh03G003320Cucurbita moschata (Rifu)carcmoB0753
Carg20021Lsi01G015850Bottle gourd (USVL1VR-Ls)carlsiB503
Carg20021Cp4.1LG10g07750Cucurbita pepo (Zucchini)carcpeB0785
Carg20021CsGy4G015530Cucumber (Gy14) v2carcgybB0561
Carg20021MELO3C026028.2Melon (DHL92) v3.6.1carmedB0568
Carg20021CsaV3_4G026740Cucumber (Chinese Long) v3carcucB0593
Carg20021Cla97C04G073260Watermelon (97103) v2carwmbB0583
Carg20021Bhi03G001726Wax gourdcarwgoB0666
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg20021Silver-seed gourdcarcarB022
Carg20021Silver-seed gourdcarcarB195
Carg20021Silver-seed gourdcarcarB301
Carg20021Silver-seed gourdcarcarB517
Carg20021Cucumber (Gy14) v2carcgybB0562
Carg20021Cucurbita maxima (Rimu)carcmaB0777
Carg20021Cucurbita maxima (Rimu)carcmaB0773
Carg20021Cucurbita maxima (Rimu)carcmaB0774
Carg20021Cucurbita moschata (Rifu)carcmoB0751
Carg20021Cucurbita moschata (Rifu)carcmoB0752
Carg20021Cucurbita moschata (Rifu)carcmoB0754
Carg20021Cucurbita moschata (Rifu)carcmoB0756
Carg20021Cucurbita pepo (Zucchini)carcpeB0786
Carg20021Cucurbita pepo (Zucchini)carcpeB0791
Carg20021Cucurbita pepo (Zucchini)carcpeB0792
Carg20021Wild cucumber (PI 183967)carcpiB0590
Carg20021Wild cucumber (PI 183967)carcpiB0592
Carg20021Cucumber (Chinese Long) v2carcuB0584
Carg20021Cucumber (Chinese Long) v2carcuB0586
Carg20021Cucumber (Chinese Long) v3carcucB0594
Carg20021Cucumber (Chinese Long) v3carcucB0592
Carg20021Bottle gourd (USVL1VR-Ls)carlsiB505
Carg20021Melon (DHL92) v3.5.1carmeB0560
Carg20021Melon (DHL92) v3.6.1carmedB0566
Carg20021Watermelon (Charleston Gray)carwcgB0540
Carg20021Watermelon (Charleston Gray)carwcgB0541
Carg20021Watermelon (97103) v1carwmB0553
Carg20021Watermelon (97103) v2carwmbB0581
Carg20021Watermelon (97103) v2carwmbB0582
Carg20021Wax gourdcarwgoB0665
Carg20021Cucurbita maxima (Rimu)carcmaB0776