CmaCh02G011200 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCACTCTCTTTCCTGGTCTCTACCCCATGTGGTCGGAGCCGCCCCACACACTGGAGCGGAGCTCTACGCCGTCGCTAGTTCTCTCTCGGCTTCCGCCAGAGCCACCGTGGATGCCGACACCGCCTCGTTTAACTTTGGCCTCCGTTCCCTTTTTGTGGGAGGAGGCGCCGGGTAAGCCCCGACCATTCGCTGGATCGGAAATTCCGTGGCTATCGCCGCCGCTGGGGGACCTTCCTCCGCCGCCTCGGCTGTTGAATGAAGCCATACAGAGCACTCTGCTGTCGCCCACGACCGTGCTCGACGGACCTGAAAGGGCTTATGGATCAAAAAGATGGGGTAGTTTCAGAATGTGTAAGGAGCTTGTCAGCGGCGGGAACGACTCTTTGGCCACCGGTGTCGACGGCGGCGGTGGTGGAAGCGGGAGGTTTGGAAAGAAAATAACTCCGTCACTGTCGGTTTCTTCTTACGGAAGATCACACTTCTTGGTAAGTCCAAATATTTCAACTTTTTTTTTTCTTTTCATAATAATATATATTTTTTTAAAAATGTGAGTAGGTAATATTTGTTTTGTTATGCTAA TCACTCTCTTTCCTGGTCTCTACCCCATGTGGTCGGAGCCGCCCCACACACTGGAGCGGAGCTCTACGCCGTCGCTAGTTCTCTCTCGGCTTCCGCCAGAGCCACCGTGGATGCCGACACCGCCTCGTTTAACTTTGGCCTCCGTTCCCTTTTTGTGGGAGGAGGCGCCGGGTAAGCCCCGACCATTCGCTGGATCGGAAATTCCGTGGCTATCGCCGCCGCTGGGGGACCTTCCTCCGCCGCCTCGGCTGTTGAATGAAGCCATACAGAGCACTCTGCTGTCGCCCACGACCGTGCTCGACGGACCTGAAAGGGCTTATGGATCAAAAAGATGGGGTAGTTTCAGAATGTGTAAGGAGCTTGTCAGCGGCGGGAACGACTCTTTGGCCACCGGTGTCGACGGCGGCGGTGGTGGAAGCGGGAGGTTTGGAAAGAAAATAACTCCGTCACTGTCGGTTTCTTCTTACGGAAGATCACACTTCTTGGTAATATTTGTTTTGTTATGCTAA ATGTGGTCGGAGCCGCCCCACACACTGGAGCGGAGCTCTACGCCGTCGCTAGTTCTCTCTCGGCTTCCGCCAGAGCCACCGTGGATGCCGACACCGCCTCGTTTAACTTTGGCCTCCGTTCCCTTTTTGTGGGAGGAGGCGCCGGGTAAGCCCCGACCATTCGCTGGATCGGAAATTCCGTGGCTATCGCCGCCGCTGGGGGACCTTCCTCCGCCGCCTCGGCTGTTGAATGAAGCCATACAGAGCACTCTGCTGTCGCCCACGACCGTGCTCGACGGACCTGAAAGGGCTTATGGATCAAAAAGATGGGGTAGTTTCAGAATGTGTAAGGAGCTTGTCAGCGGCGGGAACGACTCTTTGGCCACCGGTGTCGACGGCGGCGGTGGTGGAAGCGGGAGGTTTGGAAAGAAAATAACTCCGTCACTGTCGGTTTCTTCTTACGGAAGATCACACTTCTTGGTAATATTTGTTTTGTTATGCTAA MWSEPPHTLERSSTPSLVLSRLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPFAGSEIPWLSPPLGDLPPPPRLLNEAIQSTLLSPTTVLDGPERAYGSKRWGSFRMCKELVSGGNDSLATGVDGGGGGSGRFGKKITPSLSVSSYGRSHFLVIFVLLC
BLAST of CmaCh02G011200 vs. TrEMBL
Match: A0A0A0KJF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139380 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.4e-29 Identity = 90/168 (53.57%), Postives = 106/168 (63.10%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TrEMBL
Match: M5XFL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015318mg PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.8e-15 Identity = 72/173 (41.62%), Postives = 85/173 (49.13%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TrEMBL
Match: A0A061G957_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015429 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.8e-14 Identity = 73/188 (38.83%), Postives = 85/188 (45.21%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TrEMBL
Match: A0A0B0PS77_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11236 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-12 Identity = 69/186 (37.10%), Postives = 83/186 (44.62%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TrEMBL
Match: A0A0D2UAE0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G268100 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.8e-12 Identity = 68/186 (36.56%), Postives = 80/186 (43.01%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TAIR10
Match: AT5G53030.1 (AT5G53030.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09 Identity = 55/150 (36.67%), Postives = 61/150 (40.67%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TAIR10
Match: AT5G51680.1 (AT5G51680.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 48.5 bits (114), Expect = 4.4e-06 Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1
BLAST of CmaCh02G011200 vs. TAIR10
Match: AT4G27810.1 (AT4G27810.1 unknown protein) HSP 1 Score: 47.4 bits (111), Expect = 9.8e-06 Identity = 57/160 (35.62%), Postives = 70/160 (43.75%), Query Frame = 1
BLAST of CmaCh02G011200 vs. NCBI nr
Match: gi|659074444|ref|XP_008437607.1| (PREDICTED: uncharacterized protein LOC103482969 [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 7.5e-32 Identity = 96/163 (58.90%), Postives = 106/163 (65.03%), Query Frame = 1
BLAST of CmaCh02G011200 vs. NCBI nr
Match: gi|778698860|ref|XP_011654611.1| (PREDICTED: uncharacterized protein LOC105435423 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 2.0e-29 Identity = 90/168 (53.57%), Postives = 106/168 (63.10%), Query Frame = 1
BLAST of CmaCh02G011200 vs. NCBI nr
Match: gi|596022544|ref|XP_007219099.1| (hypothetical protein PRUPE_ppa015318mg [Prunus persica]) HSP 1 Score: 89.0 bits (219), Expect = 8.3e-15 Identity = 72/173 (41.62%), Postives = 85/173 (49.13%), Query Frame = 1
BLAST of CmaCh02G011200 vs. NCBI nr
Match: gi|645258172|ref|XP_008234762.1| (PREDICTED: uncharacterized protein At4g00950 [Prunus mume]) HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14 Identity = 67/162 (41.36%), Postives = 76/162 (46.91%), Query Frame = 1
BLAST of CmaCh02G011200 vs. NCBI nr
Match: gi|658020109|ref|XP_008345429.1| (PREDICTED: uncharacterized protein LOC103408357 [Malus domestica]) HSP 1 Score: 86.3 bits (212), Expect = 5.4e-14 Identity = 69/160 (43.12%), Postives = 77/160 (48.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |