Cla004892 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGCGGCTTTTGAACGAAGCCAAACAGAGCACTCTACCGTCTCCCACGACGGTGCTCGACGGCCCAGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGCCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTCTTATGCAAGATCACACTTCTTGGTGAGCCCAAGTATTTCCAACTTTTTTTTTAAAATTTATTTTATATTTATCTTATTATTTATTAATTTTTTTAACATCTTTACATAAATATGTCACTTAAATGCTATTATATTTGTTTTAACTTAAATGCTATTATATTTGTTTTTAACTCCACTAACCAAATTTATTTATCCACTTACACATAACTCAATTGGTATCAATTAAACATCTCTTATCCTATTTGTTTGTTGAACTAAATAATAATAATATATAAAATGAAATTTATTTACCAAGTTATTAGATATCTCTGCATATGCCTAAATATATTAATAAAGTAATAATTCAAATGACACAACTATCTATAAAATGACTTAATTGAAAATCTCTAATACTTTACAGGTAGAATTCATATTTTAA ATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGCGGCTTTTGAACGAAGCCAAACAGAGCACTCTACCGTCTCCCACGACGGTGCTCGACGGCCCAGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGCCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTCTTATGCAAGATCACACTTCTTGGTAGAATTCATATTTTAA ATGTGCTCGGAGCCGCCGCATACGGTGGAGACGACCTCTACTCCCACCCTACCTCTGTCTTCGCTTCCTCCGGAGCCGCCGTGGATGCCAACGCCGCCGCGTTTAACTTTGGCCTCCGTTCCCTTTCTGTGGGAGGAGGCGCCGGGGAAGCCGCGGCCATCCCCCGCATCGGAACTTCTATGGCGGGTGCCGGCGTTGAGGGAGCTGCCTCCGCCGCCGCGGCTTTTGAACGAAGCCAAACAGAGCACTCTACCGTCTCCCACGACGGTGCTCGACGGCCCAGAAAGGGCTGGCGACGGATCAAAGAGATGGGGTTCTTTTAGGATGTTTAAGGATTTCGTCGGTGGTAACGGCAACGACCCTTCGGCCACCGGTGTCGACGGCGGCGGCGGAAGCGGGAGGTTTAGAAGGAAAAGAACTTCATCATTGTCAGTTTCTTCTTATGCAAGATCACACTTCTTGGTAGAATTCATATTTTAA MCSEPPHTVETTSTPTLPLSSLPPEPPWMPTPPRLTLASVPFLWEEAPGKPRPSPASELLWRVPALRELPPPPRLLNEAKQSTLPSPTTVLDGPERAGDGSKRWGSFRMFKDFVGGNGNDPSATGVDGGGGSGRFRRKRTSSLSVSSYARSHFLVEFIF
BLAST of Cla004892 vs. TrEMBL
Match: A0A0A0KJF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139380 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.5e-39 Identity = 105/170 (61.76%), Postives = 116/170 (68.24%), Query Frame = 1
BLAST of Cla004892 vs. TrEMBL
Match: A0A0B0PS77_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11236 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21 Identity = 80/186 (43.01%), Postives = 91/186 (48.92%), Query Frame = 1
BLAST of Cla004892 vs. TrEMBL
Match: A0A061G957_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015429 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-21 Identity = 78/188 (41.49%), Postives = 90/188 (47.87%), Query Frame = 1
BLAST of Cla004892 vs. TrEMBL
Match: A0A0D2UAE0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G268100 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 4.1e-21 Identity = 79/186 (42.47%), Postives = 90/186 (48.39%), Query Frame = 1
BLAST of Cla004892 vs. TrEMBL
Match: M5XFL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015318mg PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 9.2e-21 Identity = 80/192 (41.67%), Postives = 97/192 (50.52%), Query Frame = 1
BLAST of Cla004892 vs. NCBI nr
Match: gi|659074444|ref|XP_008437607.1| (PREDICTED: uncharacterized protein LOC103482969 [Cucumis melo]) HSP 1 Score: 185.7 bits (470), Expect = 6.5e-44 Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 1
BLAST of Cla004892 vs. NCBI nr
Match: gi|778698860|ref|XP_011654611.1| (PREDICTED: uncharacterized protein LOC105435423 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38 Identity = 105/170 (61.76%), Postives = 116/170 (68.24%), Query Frame = 1
BLAST of Cla004892 vs. NCBI nr
Match: gi|728848432|gb|KHG27875.1| (hypothetical protein F383_11236 [Gossypium arboreum]) HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21 Identity = 80/186 (43.01%), Postives = 91/186 (48.92%), Query Frame = 1
BLAST of Cla004892 vs. NCBI nr
Match: gi|590674120|ref|XP_007039078.1| (Uncharacterized protein TCM_015429 [Theobroma cacao]) HSP 1 Score: 109.8 bits (273), Expect = 4.5e-21 Identity = 78/188 (41.49%), Postives = 90/188 (47.87%), Query Frame = 1
BLAST of Cla004892 vs. NCBI nr
Match: gi|823214458|ref|XP_012439981.1| (PREDICTED: uncharacterized protein At4g00950-like [Gossypium raimondii]) HSP 1 Score: 109.4 bits (272), Expect = 5.9e-21 Identity = 79/186 (42.47%), Postives = 90/186 (48.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |