CmaCh02G007000 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGGAAGCTGCTCTAGTTTCCTTCAAATCCAAGCTTTCAAAACCATGCAAGAAACTCCTCCATGTCTTCAAATTCCGGATCAGAAAGCCCTTGTCAGTAAGATCACTTTGGGTTCGGCCTCGTCCTAGAAAGCGTTGGTCGTGGCTCCGGTGGCTACGACGAGGAGTAGGGAAGATGGAGCGAGTGAGAGAGTTGAGGGGCGGAAAGTGTTTGGATGGATCTCGAGAGAAGCTTCTGTTCTCGTCCCCATTGAGAGGGAGGAAGGTCGGGGAGACAACGAGGAGTTCGAGCTCGGCCGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAATTATCTTGTGGAGATGATGATTGAAGAAGGGAAAGTGAGGGACTTGATGGATGTGGAAGAGCTTTTGTATTGTTGGAGGAATTTGAAGTGCCCTGTTTTTGTTGATTTGGTTTGTAGATTCTACGGAGAGCTTTGCAAGGATTTGTTTTCTTCTGATAGTGAAGCTTTTACTCCAAATTTGCACCCAACTAAACCATAGATCGAGGAATAACGATGTAACAGTGTTAATAGTGGTTTCGTGGTGTTTTTACTTCTTTGGCTTCTCGATCTTCTCGAATTCACCTTTAGTTGAAGCCTCGACATGTTGTGTACTGTAAATGTTTGAAGATTTCAGTATTCAAAGTTTTATCATTTAAATTTTTTTAGAGTCGTTAGTTTTAAATTTAAATTATTAATATTTATTTTTAAAATATTCTTGAATTTTTAATAATTTTTAACTTTGTTACTATATTTAGAAAATATGTATGAAATTTTATATATATATATATTTTTTTTTTTGTCTAAATACAAAATTATTTTTATTAATTTAGGTAAATAGTTAGTATGGTATTTTTGTAATTATCGGGCGAAGGCATTTATAAAAGAAGAGTTGGGGAACGACGGCCCAAGGGTTTTGGTGTTGTCCATTGGTACGGAAAGGGGATGGAAAGAAAGGGAGCGAATGGCGGTGACGGTGGTTAGGGTTACGGCGATGGGAGAGAGAAAGGGCGTTGCCATGGAAATGCTCTTGAAGCGGCAATTGAACGTGTGGATTGCAAAAAACCTGAGGGGATCCTGA ATGAAAGTGGAAGCTGCTCTAGTTTCCTTCAAATCCAAGCTTTCAAAACCATGCAAGAAACTCCTCCATGTCTTCAAATTCCGGATCAGAAAGCCCTTGTCAGTAAGATCACTTTGGGTTCGGCCTCGTCCTAGAAAGCGTTGGTCGTGGCTCCGGTGGCTACGACGAGGAGTAGGGAAGATGGAGCGAGTGAGAGAGTTGAGGGGCGGAAAGTGTTTGGATGGATCTCGAGAGAAGCTTCTGTTCTCGTCCCCATTGAGAGGGAGGAAGGTCGGGGAGACAACGAGGAGTTCGAGCTCGGCCGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAATTATCTTGTGGAGATGATGATTGAAGAAGGGAAAGTGAGGGACTTGATGGATGTGGAAGAGCTTTTGTATTGTTGGAGGAATTTGAAGTGCCCTGTTTTTGTTGATTTGGCATTTATAAAAGAAGAGTTGGGGAACGACGGCCCAAGGGTTTTGGTGTTGTCCATTGGTACGGAAAGGGGATGGAAAGAAAGGGAGCGAATGGCGGTGACGGTGGTTAGGGTTACGGCGATGGGAGAGAGAAAGGGCGTTGCCATGGAAATGCTCTTGAAGCGGCAATTGAACGTGTGGATTGCAAAAAACCTGAGGGGATCCTGA ATGAAAGTGGAAGCTGCTCTAGTTTCCTTCAAATCCAAGCTTTCAAAACCATGCAAGAAACTCCTCCATGTCTTCAAATTCCGGATCAGAAAGCCCTTGTCAGTAAGATCACTTTGGGTTCGGCCTCGTCCTAGAAAGCGTTGGTCGTGGCTCCGGTGGCTACGACGAGGAGTAGGGAAGATGGAGCGAGTGAGAGAGTTGAGGGGCGGAAAGTGTTTGGATGGATCTCGAGAGAAGCTTCTGTTCTCGTCCCCATTGAGAGGGAGGAAGGTCGGGGAGACAACGAGGAGTTCGAGCTCGGCCGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAATTATCTTGTGGAGATGATGATTGAAGAAGGGAAAGTGAGGGACTTGATGGATGTGGAAGAGCTTTTGTATTGTTGGAGGAATTTGAAGTGCCCTGTTTTTGTTGATTTGGCATTTATAAAAGAAGAGTTGGGGAACGACGGCCCAAGGGTTTTGGTGTTGTCCATTGGTACGGAAAGGGGATGGAAAGAAAGGGAGCGAATGGCGGTGACGGTGGTTAGGGTTACGGCGATGGGAGAGAGAAAGGGCGTTGCCATGGAAATGCTCTTGAAGCGGCAATTGAACGTGTGGATTGCAAAAAACCTGAGGGGATCCTGA MKVEAALVSFKSKLSKPCKKLLHVFKFRIRKPLSVRSLWVRPRPRKRWSWLRWLRRGVGKMERVRELRGGKCLDGSREKLLFSSPLRGRKVGETTRSSSSAEEVEDACRSFENYLVEMMIEEGKVRDLMDVEELLYCWRNLKCPVFVDLAFIKEELGNDGPRVLVLSIGTERGWKERERMAVTVVRVTAMGERKGVAMEMLLKRQLNVWIAKNLRGS
BLAST of CmaCh02G007000 vs. Swiss-Prot
Match: OPF17_ARATH (Transcription repressor OFP17 OS=Arabidopsis thaliana GN=OFP17 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.5e-22 Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TrEMBL
Match: A0A0A0KHG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G212870 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47 Identity = 110/160 (68.75%), Postives = 121/160 (75.62%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TrEMBL
Match: D7SJK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07900 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31 Identity = 89/165 (53.94%), Postives = 112/165 (67.88%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TrEMBL
Match: W9RZU1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010682 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29 Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TrEMBL
Match: B9RX04_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0815050 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 7.3e-29 Identity = 84/161 (52.17%), Postives = 104/161 (64.60%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TrEMBL
Match: A0A0D2TJF4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G137600 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27 Identity = 86/165 (52.12%), Postives = 109/165 (66.06%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TAIR10
Match: AT2G30395.1 (AT2G30395.1 ovate family protein 17) HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23 Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 1
BLAST of CmaCh02G007000 vs. TAIR10
Match: AT1G06923.1 (AT1G06923.1 BEST Arabidopsis thaliana protein match is: ovate family protein 17 (TAIR:AT2G30395.1)) HSP 1 Score: 85.5 bits (210), Expect = 4.4e-17 Identity = 57/160 (35.62%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of CmaCh02G007000 vs. NCBI nr
Match: gi|449463304|ref|XP_004149374.1| (PREDICTED: transcription repressor OFP17 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47 Identity = 110/160 (68.75%), Postives = 121/160 (75.62%), Query Frame = 1
BLAST of CmaCh02G007000 vs. NCBI nr
Match: gi|659130699|ref|XP_008465302.1| (PREDICTED: uncharacterized protein LOC103502957 [Cucumis melo]) HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47 Identity = 115/164 (70.12%), Postives = 127/164 (77.44%), Query Frame = 1
BLAST of CmaCh02G007000 vs. NCBI nr
Match: gi|297745775|emb|CBI15831.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31 Identity = 89/165 (53.94%), Postives = 112/165 (67.88%), Query Frame = 1
BLAST of CmaCh02G007000 vs. NCBI nr
Match: gi|703145272|ref|XP_010108489.1| (hypothetical protein L484_010682 [Morus notabilis]) HSP 1 Score: 137.9 bits (346), Expect = 2.1e-29 Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 1
BLAST of CmaCh02G007000 vs. NCBI nr
Match: gi|255554469|ref|XP_002518273.1| (PREDICTED: transcription repressor OFP17 [Ricinus communis]) HSP 1 Score: 135.6 bits (340), Expect = 1.1e-28 Identity = 84/161 (52.17%), Postives = 104/161 (64.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|