Csa6G212870 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G212870
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	ATOFP17/OFP17
Location	Chr6 : 12904894 .. 12905448 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTGGAAGTTGGCCTAGTTTCCTTCAAATCCAAGCTTTCAAAGCCATGTTCAAAGCTCCTTCATCTCTTCAAATTCCCAATGAAGAAGCCCTTCTCCATCAAATCATTTTGGGCTCGACGCAGCTCCAGAGCCATATCCAAGCCTCGACGAAAGACTTGGTCCTGGCTCCGGTGGCTACGAAGAGTAGGGAAGATGGAAAGAGTAAGAGAGTTGAAATCAAGTGAAAGCGTAGGCTCAGACAATGAATCTAGAGAAAAGCTGCTATTTCCATCTCCGTTGATTAGGAGACGAACGAAGGTGGCAGCATCGTGGGAGGAGAGGGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAACTATCTTGTGGAAATGATAATCGAAGAAGGGAAAGTGAGGGATTTGATGGATGTGGAAGAGCTTTTGTATTGTTGGAGGAAGTTGAAGTGCCCTGTTTTTGTTGATTTGGTGTCTAGATTTTATGGAGAGCTTTGTAAGGACTTATTCTCTTCCCATAATCAAGCTTTTACTCCAAACTTTCAACACAAGTAA

mRNA sequence

ATGAAAGTGGAAGTTGGCCTAGTTTCCTTCAAATCCAAGCTTTCAAAGCCATGTTCAAAGCTCCTTCATCTCTTCAAATTCCCAATGAAGAAGCCCTTCTCCATCAAATCATTTTGGGCTCGACGCAGCTCCAGAGCCATATCCAAGCCTCGACGAAAGACTTGGTCCTGGCTCCGGTGGCTACGAAGAGTAGGGAAGATGGAAAGAGTAAGAGAGTTGAAATCAAGTGAAAGCGTAGGCTCAGACAATGAATCTAGAGAAAAGCTGCTATTTCCATCTCCGTTGATTAGGAGACGAACGAAGGTGGCAGCATCGTGGGAGGAGAGGGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAACTATCTTGTGGAAATGATAATCGAAGAAGGGAAAGTGAGGGATTTGATGGATGTGGAAGAGCTTTTGTATTGTTGGAGGAAGTTGAAGTGCCCTGTTTTTGTTGATTTGGTGTCTAGATTTTATGGAGAGCTTTGTAAGGACTTATTCTCTTCCCATAATCAAGCTTTTACTCCAAACTTTCAACACAAGTAA

Coding sequence (CDS)

ATGAAAGTGGAAGTTGGCCTAGTTTCCTTCAAATCCAAGCTTTCAAAGCCATGTTCAAAGCTCCTTCATCTCTTCAAATTCCCAATGAAGAAGCCCTTCTCCATCAAATCATTTTGGGCTCGACGCAGCTCCAGAGCCATATCCAAGCCTCGACGAAAGACTTGGTCCTGGCTCCGGTGGCTACGAAGAGTAGGGAAGATGGAAAGAGTAAGAGAGTTGAAATCAAGTGAAAGCGTAGGCTCAGACAATGAATCTAGAGAAAAGCTGCTATTTCCATCTCCGTTGATTAGGAGACGAACGAAGGTGGCAGCATCGTGGGAGGAGAGGGAGGAGGTGGAAGATGCTTGTAGGAGCTTTGAGAACTATCTTGTGGAAATGATAATCGAAGAAGGGAAAGTGAGGGATTTGATGGATGTGGAAGAGCTTTTGTATTGTTGGAGGAAGTTGAAGTGCCCTGTTTTTGTTGATTTGGTGTCTAGATTTTATGGAGAGCTTTGTAAGGACTTATTCTCTTCCCATAATCAAGCTTTTACTCCAAACTTTCAACACAAGTAA

Protein sequence

MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRWLRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPNFQHK*

Homology

[Close]

BLAST of Csa6G212870 vs. Swiss-Prot
Match: OPF17_ARATH (Transcription repressor OFP17 OS=Arabidopsis thaliana GN=OFP17 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.2e-34
Identity = 87/196 (44.39%), Postives = 116/196 (59.18%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRK------- 60
           M+V+  L++FKSKLSK C++ + LF+F +K+P  I+   AR  +    KPR +       
Sbjct: 1   MRVKATLINFKSKLSKSCNRFVSLFRFRVKRPVFIRPLRARHGN---VKPRHQHHHSKKP 60

Query: 61  TWSWLRWLR--RVGKMERVRELKSSESVGSDNESR----------EKLLFPSPLIR---- 120
             S L +L   +  KM   +   SS SV  D+ S+           K LF SP+      
Sbjct: 61  ICSCLCFLNSSKNHKMSNAKHRSSSFSVNDDDYSKFMQSPLTPATAKKLFTSPITTPYSS 120

Query: 121 --RRTKVAASWEEREEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFV 172
             R++  A    E   VEDACRSFENYL+ +I+EEGK+ DLMD+EELL+CW+ LK PVF+
Sbjct: 121 RTRKSLNARDTFEDNAVEDACRSFENYLIHLIVEEGKIDDLMDIEELLFCWKNLKSPVFI 180

[Close]

BLAST of Csa6G212870 vs. TrEMBL
Match: A0A0A0KHG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G212870 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 7.2e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW 60
           MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW
Sbjct: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW 60

Query: 61  LRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFE 120
           LRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFE
Sbjct: 61  LRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFE 120

Query: 121 NYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPN 180
           NYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPN
Sbjct: 121 NYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPN 180

Query: 181 FQHK 185
           FQHK
Sbjct: 181 FQHK 184

[Close]

BLAST of Csa6G212870 vs. TrEMBL
Match: W9RZU1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010682 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-42
Identity = 100/183 (54.64%), Postives = 127/183 (69.40%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWAR--RSSRAISKPRRKT---- 60
           MKV+  L SFKSK+ KPC +LL  FKF +KKP  I+S   R   +S+ I+KP +      
Sbjct: 1   MKVKA-LTSFKSKILKPCRRLLPAFKFKLKKPIFIRSLQLRPHNNSKKITKPTKNRITSL 60

Query: 61  WSWLRWLRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKV-----AASWEER 120
           +S LR+ R+  +M+R+ +LKS     S+    E +LFPSPL     K+       ++   
Sbjct: 61  FSALRFRRKTSEMDRLVQLKSF----SETSGGEGMLFPSPLTPAYVKINKADKREAYSGL 120

Query: 121 EEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDL 173
           E+VEDACRSFENYLVEMI+EEGK+RDLMDVEELLY W+ LKCPVF+DLVSRFYGELCKDL
Sbjct: 121 EDVEDACRSFENYLVEMIVEEGKLRDLMDVEELLYYWKNLKCPVFIDLVSRFYGELCKDL 178

[Close]

BLAST of Csa6G212870 vs. TrEMBL
Match: D7SJK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07900 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.4e-42
Identity = 100/188 (53.19%), Postives = 123/188 (65.43%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKT------ 60
           MKV   L++FKSKL  PC KL  +FKF  K+PF +++   RR  R      RKT      
Sbjct: 1   MKVRT-LIAFKSKLLNPCRKLQPIFKFRFKRPFFLRALQVRRRPR--QSETRKTPPKNRF 60

Query: 61  ---WSWLRWLRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEE--- 120
               S  R+ R+  +M+RVREL+S    G     +E+ LFPSPL     K  A+ +    
Sbjct: 61  TALLSLFRFQRQEKEMDRVRELRSISDAG-----QERRLFPSPLTPASMKAGAAGKRVAS 120

Query: 121 -REEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCK 176
             E++EDACRSFENYLVEMI+EEGKVRDLMDVEELLYCW+ LKCPVF+DLV RFYGELCK
Sbjct: 121 GHEDLEDACRSFENYLVEMIVEEGKVRDLMDVEELLYCWKNLKCPVFIDLVCRFYGELCK 180

[Close]

BLAST of Csa6G212870 vs. TrEMBL
Match: A0A068U674_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016591001 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.9e-40
Identity = 93/170 (54.71%), Postives = 111/170 (65.29%), Query Frame = 1


Query: 10  FKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRWLRRVGKMER 69
           FK KL  PC KLLH FK  + KP  I++   RRS     KPR++  S    L   G M+R
Sbjct: 9   FKRKLFNPCKKLLHFFKLRLGKPLFIRALQFRRSKYPPRKPRKRVLSIFYCLMPSGDMDR 68

Query: 70  VRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEE----REEVEDACRSFENYLVE 129
           V ELKS    G       +  FPSPL     K++A+ EE     EEVEDACRSFEN+LV+
Sbjct: 69  VLELKSFSDAG-----HSRAPFPSPLTPASVKMSAAIEEVVSGEEEVEDACRSFENHLVD 128

Query: 130 MIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQ 176
           MII+EGK+RDLMDVEELL+CW  LK PVF+DLV RFYGELC+DLFS+  Q
Sbjct: 129 MIIDEGKMRDLMDVEELLHCWNNLKSPVFIDLVCRFYGELCRDLFSNSPQ 173

[Close]

BLAST of Csa6G212870 vs. TrEMBL
Match: B9RX04_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0815050 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38
Identity = 97/176 (55.11%), Postives = 112/176 (63.64%), Query Frame = 1


Query: 7   LVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRWLRRV-- 66
           LV+FKSKL KPC KLL  F+F ++KP  I+S   R S         + W +L  L  V  
Sbjct: 6   LVAFKSKLVKPCRKLLLTFRFKIRKPVFIRSLRFRASRSKTGTRPVRNW-FLTVLHSVFC 65

Query: 67  -----GKMERVRELKSSESVGSDNESREKLLFPSPLI-----RRRTKVAASWEEREEVED 126
                 +M R+ ELKS           EK LFPSPL        RT +  S+   E+VED
Sbjct: 66  PAKQSREMNRLAELKSVSKA-----EHEKKLFPSPLTPAYITASRTAMRESFMGSEDVED 125

Query: 127 ACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLF 171
           ACRSFENYLVEMI+EEGKVRDLMDVEELLYCW+ LKCPVF+DLV RFYGELCKDLF
Sbjct: 126 ACRSFENYLVEMIVEEGKVRDLMDVEELLYCWKNLKCPVFIDLVCRFYGELCKDLF 175

[Close]

BLAST of Csa6G212870 vs. TAIR10
Match: AT2G30395.1 (AT2G30395.1 ovate family protein 17)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-35
Identity = 87/196 (44.39%), Postives = 116/196 (59.18%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRK------- 60
           M+V+  L++FKSKLSK C++ + LF+F +K+P  I+   AR  +    KPR +       
Sbjct: 1   MRVKATLINFKSKLSKSCNRFVSLFRFRVKRPVFIRPLRARHGN---VKPRHQHHHSKKP 60

Query: 61  TWSWLRWLR--RVGKMERVRELKSSESVGSDNESR----------EKLLFPSPLIR---- 120
             S L +L   +  KM   +   SS SV  D+ S+           K LF SP+      
Sbjct: 61  ICSCLCFLNSSKNHKMSNAKHRSSSFSVNDDDYSKFMQSPLTPATAKKLFTSPITTPYSS 120

Query: 121 --RRTKVAASWEEREEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFV 172
             R++  A    E   VEDACRSFENYL+ +I+EEGK+ DLMD+EELL+CW+ LK PVF+
Sbjct: 121 RTRKSLNARDTFEDNAVEDACRSFENYLIHLIVEEGKIDDLMDIEELLFCWKNLKSPVFI 180

[Close]

BLAST of Csa6G212870 vs. TAIR10
Match: AT1G06923.1 (AT1G06923.1 BEST Arabidopsis thaliana protein match is: ovate family protein 17 (TAIR:AT2G30395.1))

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-26
Identity = 64/176 (36.36%), Postives = 97/176 (55.11%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW 60
           M+++  L+S KSKLSK C++ +  F    +   + +S  +   SR       K       
Sbjct: 1   MRLKSSLISLKSKLSKSCNRFISFFHARFRNVNTTQSSSSSLLSRLCFLNTNKEQ----- 60

Query: 61  LRRVGKMERVRELKSSESVGSDNES-REKLLFPSPLIRRRTKVAASWE---EREEVEDAC 120
                +M ++R   S  S+  D++    + +FP  + +R  K   S     + + V++AC
Sbjct: 61  -----RMSQIRPRNSPSSLIDDSKLLHSRKMFPLAMTQRNKKARTSQRHMLKEDGVKEAC 120

Query: 121 RSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSS 173
           R FENY++ M +E+GK+ DLMD+EELLY W+ L  P+F+DLV+RFYGELC DLF S
Sbjct: 121 RRFENYMIHMFVEDGKIDDLMDMEELLYYWKNLNSPIFIDLVTRFYGELCTDLFPS 166

[Close]

BLAST of Csa6G212870 vs. NCBI nr
Match: gi|449463304|ref|XP_004149374.1| (PREDICTED: transcription repressor OFP17 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-101
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW 60
           MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW
Sbjct: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRW 60

Query: 61  LRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFE 120
           LRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFE
Sbjct: 61  LRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEEREEVEDACRSFE 120

Query: 121 NYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPN 180
           NYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPN
Sbjct: 121 NYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQAFTPN 180

Query: 181 FQHK 185
           FQHK
Sbjct: 181 FQHK 184

[Close]

BLAST of Csa6G212870 vs. NCBI nr
Match: gi|659130699|ref|XP_008465302.1| (PREDICTED: uncharacterized protein LOC103502957 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 168/190 (88.42%), Postives = 175/190 (92.11%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWA---RRSSRAISKPRRKTWSW 60
           MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKS W    RR+SRAISKPRR+TWSW
Sbjct: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSLWTRHPRRNSRAISKPRRRTWSW 60

Query: 61  LRWLRRVGKMERVRE-LKSSESVGSDNESREKLLFPSPLIRRRTKVAA--SWEEREEVED 120
           LRWLRRVGKMERVR+ L+SSESV SDNE REKLLFPSP+IR R KVAA  SWEE+EEVED
Sbjct: 61  LRWLRRVGKMERVRDHLRSSESVRSDNECREKLLFPSPMIRGR-KVAAGTSWEEKEEVED 120

Query: 121 ACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHN 180
           AC+SFENYLVEMIIEEGKVRDLMDVEELLYCWR LKCPVFVDLVSRFYGELCKDLFSSH 
Sbjct: 121 ACKSFENYLVEMIIEEGKVRDLMDVEELLYCWRNLKCPVFVDLVSRFYGELCKDLFSSHI 180

Query: 181 QAFTPNFQHK 185
           QAFTPNFQ K
Sbjct: 181 QAFTPNFQPK 189

[Close]

BLAST of Csa6G212870 vs. NCBI nr
Match: gi|703145272|ref|XP_010108489.1| (hypothetical protein L484_010682 [Morus notabilis])

HSP 1 Score: 179.1 bits (453), Expect = 7.1e-42
Identity = 100/183 (54.64%), Postives = 127/183 (69.40%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWAR--RSSRAISKPRRKT---- 60
           MKV+  L SFKSK+ KPC +LL  FKF +KKP  I+S   R   +S+ I+KP +      
Sbjct: 1   MKVKA-LTSFKSKILKPCRRLLPAFKFKLKKPIFIRSLQLRPHNNSKKITKPTKNRITSL 60

Query: 61  WSWLRWLRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKV-----AASWEER 120
           +S LR+ R+  +M+R+ +LKS     S+    E +LFPSPL     K+       ++   
Sbjct: 61  FSALRFRRKTSEMDRLVQLKSF----SETSGGEGMLFPSPLTPAYVKINKADKREAYSGL 120

Query: 121 EEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDL 173
           E+VEDACRSFENYLVEMI+EEGK+RDLMDVEELLY W+ LKCPVF+DLVSRFYGELCKDL
Sbjct: 121 EDVEDACRSFENYLVEMIVEEGKLRDLMDVEELLYYWKNLKCPVFIDLVSRFYGELCKDL 178

[Close]

BLAST of Csa6G212870 vs. NCBI nr
Match: gi|297745775|emb|CBI15831.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 178.7 bits (452), Expect = 9.2e-42
Identity = 100/188 (53.19%), Postives = 123/188 (65.43%), Query Frame = 1


Query: 1   MKVEVGLVSFKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKT------ 60
           MKV   L++FKSKL  PC KL  +FKF  K+PF +++   RR  R      RKT      
Sbjct: 1   MKVRT-LIAFKSKLLNPCRKLQPIFKFRFKRPFFLRALQVRRRPR--QSETRKTPPKNRF 60

Query: 61  ---WSWLRWLRRVGKMERVRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEE--- 120
               S  R+ R+  +M+RVREL+S    G     +E+ LFPSPL     K  A+ +    
Sbjct: 61  TALLSLFRFQRQEKEMDRVRELRSISDAG-----QERRLFPSPLTPASMKAGAAGKRVAS 120

Query: 121 -REEVEDACRSFENYLVEMIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCK 176
             E++EDACRSFENYLVEMI+EEGKVRDLMDVEELLYCW+ LKCPVF+DLV RFYGELCK
Sbjct: 121 GHEDLEDACRSFENYLVEMIVEEGKVRDLMDVEELLYCWKNLKCPVFIDLVCRFYGELCK 180

[Close]

BLAST of Csa6G212870 vs. NCBI nr
Match: gi|661892897|emb|CDP04055.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 93/170 (54.71%), Postives = 111/170 (65.29%), Query Frame = 1


Query: 10  FKSKLSKPCSKLLHLFKFPMKKPFSIKSFWARRSSRAISKPRRKTWSWLRWLRRVGKMER 69
           FK KL  PC KLLH FK  + KP  I++   RRS     KPR++  S    L   G M+R
Sbjct: 9   FKRKLFNPCKKLLHFFKLRLGKPLFIRALQFRRSKYPPRKPRKRVLSIFYCLMPSGDMDR 68

Query: 70  VRELKSSESVGSDNESREKLLFPSPLIRRRTKVAASWEE----REEVEDACRSFENYLVE 129
           V ELKS    G       +  FPSPL     K++A+ EE     EEVEDACRSFEN+LV+
Sbjct: 69  VLELKSFSDAG-----HSRAPFPSPLTPASVKMSAAIEEVVSGEEEVEDACRSFENHLVD 128

Query: 130 MIIEEGKVRDLMDVEELLYCWRKLKCPVFVDLVSRFYGELCKDLFSSHNQ 176
           MII+EGK+RDLMDVEELL+CW  LK PVF+DLV RFYGELC+DLFS+  Q
Sbjct: 129 MIIDEGKMRDLMDVEELLHCWNNLKSPVFIDLVCRFYGELCRDLFSNSPQ 173

The following BLAST results are available for this feature:

BLAST of Csa6G212870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OPF17_ARATH	3.2e-34	44.39	Transcription repressor OFP17 OS=Arabidopsis thaliana GN=OFP17 PE=2 SV=1	[more]

BLAST of Csa6G212870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHG6_CUCSA	7.2e-102	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G212870 PE=4 SV=1	[more]
W9RZU1_9ROSA	4.9e-42	54.64	Uncharacterized protein OS=Morus notabilis GN=L484_010682 PE=4 SV=1	[more]
D7SJK5_VITVI	6.4e-42	53.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07900 PE=4 SV=...	[more]
A0A068U674_COFCA	7.9e-40	54.71	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016591001 PE=4 SV=1	[more]
B9RX04_RICCO	1.1e-38	55.11	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0815050 PE=4 SV=1	[more]

BLAST of Csa6G212870 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30395.1	1.8e-35	44.39	ovate family protein 17	[more]
AT1G06923.1	2.6e-26	36.36	BEST Arabidopsis thaliana protein match is: ovate family protein 17 ...	[more]

BLAST of Csa6G212870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463304\|ref\|XP_004149374.1\|	1.0e-101	100.00	PREDICTED: transcription repressor OFP17 [Cucumis sativus]	[more]
gi\|659130699\|ref\|XP_008465302.1\|	1.2e-86	88.42	PREDICTED: uncharacterized protein LOC103502957 [Cucumis melo]	[more]
gi\|703145272\|ref\|XP_010108489.1\|	7.1e-42	54.64	hypothetical protein L484_010682 [Morus notabilis]	[more]
gi\|297745775\|emb\|CBI15831.3\|	9.2e-42	53.19	unnamed protein product [Vitis vinifera]	[more]
gi\|661892897\|emb\|CDP04055.1\|	1.1e-39	54.71	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006458	Ovate_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G212870.1	Csa6G212870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006458	Ovate protein family, C-terminal	PROFILE	PS51754	OVATE	coord: 108..168 score: 12
None	No IPR available	unknown	Coil	Coil	coord: 182..184 scor
None	No IPR available	PANTHER	PTHR34042	FAMILY NOT NAMED	coord: 7..172 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G212870	Cla013414	Watermelon (97103) v1	cuwmB520
Csa6G212870	MELO3C026874	Melon (DHL92) v3.5.1	cumeB419
Csa6G212870	ClCG02G019100	Watermelon (Charleston Gray)	cuwcgB446
Csa6G212870	Lsi10G014810	Bottle gourd (USVL1VR-Ls)	culsiB419
Csa6G212870	MELO3C026874.2	Melon (DHL92) v3.6.1	cumedB434
Csa6G212870	Cla97C02G045020	Watermelon (97103) v2	cuwmbB436
Csa6G212870	Bhi10G000683	Wax gourd	cuwgoB611
Csa6G212870	CSPI06G15020	Wild cucumber (PI 183967)	cpicuB314
Csa6G212870	CmaCh02G007000	Cucurbita maxima (Rimu)	cmacuB625
Csa6G212870	CmoCh02G007010	Cucurbita moschata (Rifu)	cmocuB616
Csa6G212870	Cp4.1LG05g10030	Cucurbita pepo (Zucchini)	cpecuB760
Csa6G212870	Carg11759	Silver-seed gourd	carcuB1075

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G212870	Cucurbita maxima (Rimu)	cmacuB381
Csa6G212870	Cucurbita maxima (Rimu)	cmacuB558
Csa6G212870	Cucurbita maxima (Rimu)	cmacuB907
Csa6G212870	Cucurbita moschata (Rifu)	cmocuB549
Csa6G212870	Cucurbita pepo (Zucchini)	cpecuB153
Csa6G212870	Cucurbita pepo (Zucchini)	cpecuB295
Csa6G212870	Cucumber (Gy14) v2	cgybcuB287
Csa6G212870	Silver-seed gourd	carcuB0080
Csa6G212870	Silver-seed gourd	carcuB0374