CmaCh02G004280 (gene) Cucurbita maxima (Rimu)

NameCmaCh02G004280
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr02 : 2167646 .. 2167870 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCAATGGTAGAATCATGGATGAGCGAGCTGGGGAAATGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCATTGATGTCCAAATCCAAGCTTTGTCACCAGCGAGACCTCAAAGAATCCGAAAACAACGTTGTCGTCTCTGCAGATTCCGATGACCGAGAAGCAACCTTGTCGGATTCCACCATTTGTTTGCTCATCGATCGCTTTGCTCCCTTGTGA

mRNA sequence

ATGGCAGCAATGGTAGAATCATGGATGAGCGAGCTGGGGAAATGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCATTGATGTCCAAATCCAAGCTTTGTCACCAGCGAGACCTCAAAGAATCCGAAAACAACGTTGTCGTCTCTGCAGATTCCGATGACCGAGAAGCAACCTTGTCGGATTCCACCATTTGTTTGCTCATCGATCGCTTTGCTCCCTTGTGA

Coding sequence (CDS)

ATGGCAGCAATGGTAGAATCATGGATGAGCGAGCTGGGGAAATGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCATTGATGTCCAAATCCAAGCTTTGTCACCAGCGAGACCTCAAAGAATCCGAAAACAACGTTGTCGTCTCTGCAGATTCCGATGACCGAGAAGCAACCTTGTCGGATTCCACCATTTGTTTGCTCATCGATCGCTTTGCTCCCTTGTGA

Protein sequence

MAAMVESWMSELGKWKNRVEAQKKKPLMSKSKLCHQRDLKESENNVVVSADSDDREATLSDSTICLLIDRFAPL
BLAST of CmaCh02G004280 vs. TrEMBL
Match: A0A0A0LP24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237740 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-12
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1

Query: 1   MAAMVESWMSELGKWKNRVEAQ---KKKPLMSKSKLCHQRDLKESENNVVVSADSDDRE- 60
           M+AMVESWM+ELGKW+NRVEAQ    KKPLM KSK       K+     +  ADSDD E 
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQLQTDHFKQPAKTHM--ADSDDTET 96

Query: 61  ATLSDSTICLLIDRFAPL 75
           + LS+STICLLIDRFAPL
Sbjct: 97  SVLSESTICLLIDRFAPL 112

BLAST of CmaCh02G004280 vs. NCBI nr
Match: gi|700206637|gb|KGN61756.1| (hypothetical protein Csa_2G237740 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-12
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1

Query: 1   MAAMVESWMSELGKWKNRVEAQ---KKKPLMSKSKLCHQRDLKESENNVVVSADSDDRE- 60
           M+AMVESWM+ELGKW+NRVEAQ    KKPLM KSK       K+     +  ADSDD E 
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQLQTDHFKQPAKTHM--ADSDDTET 96

Query: 61  ATLSDSTICLLIDRFAPL 75
           + LS+STICLLIDRFAPL
Sbjct: 97  SVLSESTICLLIDRFAPL 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LP24_CUCSA1.6e-1262.82Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237740 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700206637|gb|KGN61756.1|2.3e-1262.82hypothetical protein Csa_2G237740 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G004280.1CmaCh02G004280.1mRNA


The following gene(s) are paralogous to this gene:

None