CmaCh01G003050 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003050
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant protein Lea5
Location	Cma_Chr01 : 1479543 .. 1479951 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATCTCCAGCCTCGTTTCTCTCATCAGGTATTTATCCATCCAAAAAATTAAATATTTAAGGAAGAAAATCTAAATAAATATGTATAAATTTATAGTGTAAAATGCAATCCTTAGACAATTTTGTTAAGCTTATTTAAACGTGGTGTGTGTTGGACAGGCGGGGGTATAGGGCGGGGGCGACGGCGGCGGCACAAAGAGTGGTGTCTGGCACGGCGGCGGAAGGAGTTACTGCACGAAGTGGCGGAATGATAAAGAAGGAAGAAGAAGAAAGAAGTACAGAGATGGCGGCGTGGATCCCGGACCCGGTCACCGGCTACTACCGGCCGGAGAACTACACCATCGTGATCGACGAGGTTGATCTTCGTGCTATGCTATTGAAACCGAAAAGAAACGTAATGAATTGA

mRNA sequence

ATGAACATCTCCAGCCTCGTTTCTCTCATCAGGCGGGGGTATAGGGCGGGGGCGACGGCGGCGGCACAAAGAGTGGTGTCTGGCACGGCGGCGGAAGGAGTTACTGCACGAAGTGGCGGAATGATAAAGAAGGAAGAAGAAGAAAGAAGTACAGAGATGGCGGCGTGGATCCCGGACCCGGTCACCGGCTACTACCGGCCGGAGAACTACACCATCGTGATCGACGAGGTTGATCTTCGTGCTATGCTATTGAAACCGAAAAGAAACGTAATGAATTGA

Coding sequence (CDS)

ATGAACATCTCCAGCCTCGTTTCTCTCATCAGGCGGGGGTATAGGGCGGGGGCGACGGCGGCGGCACAAAGAGTGGTGTCTGGCACGGCGGCGGAAGGAGTTACTGCACGAAGTGGCGGAATGATAAAGAAGGAAGAAGAAGAAAGAAGTACAGAGATGGCGGCGTGGATCCCGGACCCGGTCACCGGCTACTACCGGCCGGAGAACTACACCATCGTGATCGACGAGGTTGATCTTCGTGCTATGCTATTGAAACCGAAAAGAAACGTAATGAATTGA

Protein sequence

MNISSLVSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYRPENYTIVIDEVDLRAMLLKPKRNVMN

Homology

[Close]

BLAST of CmaCh01G003050 vs. Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-08
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1


Query: 8  SLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYRP 67
          ++ RRGY   A  AAQ  VS     G  A +  ++KK+  E ST+  +W+PDP TGYYRP
Sbjct: 22 AIFRRGY---AATAAQGSVSSGGRSGAVASA--VMKKKGVEESTQKISWVPDPKTGYYRP 81

Query: 68 ENYTIVIDEVDLRAMLLKPKR 89
          E  +  ID  +LRA LL  K+
Sbjct: 82 ETGSNEIDAAELRAALLNNKQ 97

[Close]

BLAST of CmaCh01G003050 vs. Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-08
Identity = 34/78 (43.59%), Postives = 38/78 (48.72%), Query Frame = 1


Query: 7  VSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYR 66
          VS+ RRGY     AA         A G   R   M +    E     +AW PDPVTGYYR
Sbjct: 21 VSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYR 80

Query: 67 PENYTIVIDEVDLRAMLL 85
          PEN    ID  DLR M+L
Sbjct: 81 PENCGAEIDAADLREMML 98

[Close]

BLAST of CmaCh01G003050 vs. Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-08
Identity = 34/78 (43.59%), Postives = 38/78 (48.72%), Query Frame = 1


Query: 7  VSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYR 66
          VS+ RRGY     AA         A G   R   M +    E     +AW PDPVTGYYR
Sbjct: 21 VSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYR 80

Query: 67 PENYTIVIDEVDLRAMLL 85
          PEN    ID  +LR MLL
Sbjct: 81 PENCGAEIDAAELREMLL 98

[Close]

BLAST of CmaCh01G003050 vs. Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.4e-08
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 2  NISSLVSLIRRGYRAGATA---AAQRVVSGTAAEGVTARSGGMIKK--EEEERSTEMAAW 61
          N+  L +L+  G+    T    AA    + +A  G  +  G M+ K  EE+ R  E  +W
Sbjct: 7  NVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSW 66

Query: 62 IPDPVTGYYRPENYTIVIDEVDLRAMLLKPKRN 90
          +PDPVTGYYRPEN T  ID  D+RA +L  K N
Sbjct: 67 VPDPVTGYYRPEN-TNEIDVADMRATVLGKKFN 98

[Close]

BLAST of CmaCh01G003050 vs. Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.8e-07
Identity = 35/85 (41.18%), Postives = 44/85 (51.76%), Query Frame = 1


Query: 7  VSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKE----EEERSTEMAAWIPDPVT 66
          +S+ RRGY A A              G  +R+G M K +      E S   +AW PDP+T
Sbjct: 21 LSISRRGYAAAAPL------------GTISRTGIMEKNDLRPAVREDSGASSAWAPDPIT 80

Query: 67 GYYRPENYTIVIDEVDLRAMLLKPK 88
          GYYRPEN  + ID  +LR MLL  K
Sbjct: 81 GYYRPENRAVEIDPAELREMLLNHK 93

[Close]

BLAST of CmaCh01G003050 vs. TrEMBL
Match: A0A0A0KV78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001860 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.1e-13
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 1


Query: 6   LVSLIRRGYRAG--ATAAAQRVVSGTAAEG----VTARSGGMIKKEEEERSTEMAA-WIP 65
           L +++RRGY A   A AA++R  + T A G     T   G +++KEE ERSTE AA WIP
Sbjct: 21  LNAIVRRGYTAEPMAMAASERATTSTPAAGGVLPATRSDGVIVEKEESERSTEKAAVWIP 80

Query: 66  DPVTGYYRPENYTIVIDEVDLRAMLLKPKRNVMN 93
           DPVTG YRPE+    +D VDLRA LLKP+RN +N
Sbjct: 81  DPVTGCYRPESNMDEMDAVDLRAKLLKPRRNTVN 114

[Close]

BLAST of CmaCh01G003050 vs. TrEMBL
Match: A0A059AX49_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01104 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.2e-10
Identity = 46/82 (56.10%), Postives = 52/82 (63.41%), Query Frame = 1


Query: 8  SLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKK--EEEERSTEMAAWIPDPVTGYY 67
          S+ RRGY     AA+Q V S  A  G T RS  M KK  EE+ RSTE  +W+PDP TGYY
Sbjct: 22 SIARRGY----AAASQGVASSFAKTGAT-RSTVMSKKTGEEKARSTERVSWVPDPKTGYY 81

Query: 68 RPENYTIVIDEVDLRAMLLKPK 88
          RPEN    ID  +LRAMLLK K
Sbjct: 82 RPENRAEEIDVAELRAMLLKNK 98

[Close]

BLAST of CmaCh01G003050 vs. TrEMBL
Match: A0A0A0KTB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001850 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.2e-10
Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 1


Query: 3  ISSLVSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEE----RSTEMAAWIP 62
          +++L  L RRGY              TA EGV AR GG++KK+EE     R  +  +W+P
Sbjct: 8  LNTLSILFRRGY-------------ATAPEGVAARLGGIMKKKEESLRIGREKKAVSWVP 67

Query: 63 DPVTGYYRPENYTIVIDEVDLRAMLL 85
          DPVTGYYRPEN    +D  DLRAMLL
Sbjct: 68 DPVTGYYRPENCGAEMDAADLRAMLL 80

[Close]

BLAST of CmaCh01G003050 vs. TrEMBL
Match: G9HVM5_CAMSI (Late embryogenesis abundant protein 3L-1 OS=Camellia sinensis GN=LEA3L-1 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-09
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 7  VSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYR 66
          +++ RRGY     AA+Q V SG     VTAR G M KK+ EE +T+  +W+PDPVTGYYR
Sbjct: 21 LAVTRRGY----AAASQGVASGP----VTARGGVMGKKDGEEEATK-TSWVPDPVTGYYR 80

Query: 67 PENYTIVIDEVDLRAMLLKPK 88
          PEN    ID  +LR MLLK K
Sbjct: 81 PENKANEIDVAELREMLLKNK 92

[Close]

BLAST of CmaCh01G003050 vs. TrEMBL
Match: A0A059AWU9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01103 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-09
Identity = 45/82 (54.88%), Postives = 49/82 (59.76%), Query Frame = 1


Query: 8  SLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKK--EEEERSTEMAAWIPDPVTGYY 67
          S  RRGY     AA+Q V S  A  G T RS  M KK  EE  RSTE  +W+PDP TGYY
Sbjct: 22 SFARRGY----AAASQGVASSVAKTGAT-RSAVMSKKTGEETARSTERVSWVPDPKTGYY 81

Query: 68 RPENYTIVIDEVDLRAMLLKPK 88
          RPEN    ID  +LRA LLK K
Sbjct: 82 RPENRAEEIDVAELRAALLKNK 98

[Close]

BLAST of CmaCh01G003050 vs. TAIR10
Match: AT4G02380.1 (AT4G02380.1 senescence-associated gene 21)

HSP 1 Score: 60.5 bits (145), Expect = 6.4e-10
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 1


Query: 8  SLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYRP 67
          ++ RRGY   A  AAQ  VS     G  A +  ++KK+  E ST+  +W+PDP TGYYRP
Sbjct: 22 AIFRRGY---AATAAQGSVSSGGRSGAVASA--VMKKKGVEESTQKISWVPDPKTGYYRP 81

Query: 68 ENYTIVIDEVDLRAMLLKPKR 89
          E  +  ID  +LRA LL  K+
Sbjct: 82 ETGSNEIDAAELRAALLNNKQ 97

[Close]

BLAST of CmaCh01G003050 vs. TAIR10
Match: AT1G02820.1 (AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 57.4 bits (137), Expect = 5.4e-09
Identity = 32/75 (42.67%), Postives = 43/75 (57.33%), Query Frame = 1


Query: 14 YRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYRPENYTIV 73
          +R G  AAA+  + G+        S   +KK   E S+E A W+PDP TGYYRPE  +  
Sbjct: 24 FRRGFAAAAKTALDGSV-------STAEMKKRAGEASSEKAPWVPDPKTGYYRPETVSEE 83

Query: 74 IDEVDLRAMLLKPKR 89
          ID  +LRA+LL  K+
Sbjct: 84 IDPAELRAILLNNKQ 91

[Close]

BLAST of CmaCh01G003050 vs. TAIR10
Match: AT4G15910.1 (AT4G15910.1 drought-induced 21)

HSP 1 Score: 50.1 bits (118), Expect = 8.7e-07
Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = 1


Query: 9   LIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMA--AWIPDPVTGYYR 68
           ++RR Y     A +Q V +   ++G + R   M+ K E+    + A  AW PDPVTGYYR
Sbjct: 26  VLRRSY----VATSQNVTAAGLSKGGSTRV--MVGKMEQRGLDQEAESAWGPDPVTGYYR 85

Query: 69  PENYTIVIDEVDLRAMLLKPK 88
           P N    ID  +LR +LLK K
Sbjct: 86  PSNRAAEIDPAELRELLLKNK 100

[Close]

BLAST of CmaCh01G003050 vs. NCBI nr
Match: gi|700197661|gb|KGN52819.1| (hypothetical protein Csa_4G001860 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-13
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 1


Query: 6   LVSLIRRGYRAG--ATAAAQRVVSGTAAEG----VTARSGGMIKKEEEERSTEMAA-WIP 65
           L +++RRGY A   A AA++R  + T A G     T   G +++KEE ERSTE AA WIP
Sbjct: 21  LNAIVRRGYTAEPMAMAASERATTSTPAAGGVLPATRSDGVIVEKEESERSTEKAAVWIP 80

Query: 66  DPVTGYYRPENYTIVIDEVDLRAMLLKPKRNVMN 93
           DPVTG YRPE+    +D VDLRA LLKP+RN +N
Sbjct: 81  DPVTGCYRPESNMDEMDAVDLRAKLLKPRRNTVN 114

[Close]

BLAST of CmaCh01G003050 vs. NCBI nr
Match: gi|659108673|ref|XP_008454328.1| (PREDICTED: late embryogenesis abundant protein Lea5-A-like [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-13
Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 1


Query: 18 ATAAAQRVVSGTAAEGV--TARSGGMIKKEEEERSTE---MAAWIPDPVTGYYRPENYTI 77
          A AA++RV S +A  GV   A S G++KKEE ERST     AAW+PDPVTGYYRPENY  
Sbjct: 2  AMAASERVTSTSAGGGVLPAAGSDGVMKKEESERSTTEKAAAAWMPDPVTGYYRPENYVD 61

Query: 78 VIDEVDLRAMLLKPKRNVMN 93
           +D VDLR  LLK +RN +N
Sbjct: 62 EMDPVDLRDKLLKARRNTIN 81

[Close]

BLAST of CmaCh01G003050 vs. NCBI nr
Match: gi|702435555|ref|XP_010069902.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Eucalyptus grandis])

HSP 1 Score: 72.0 bits (175), Expect = 6.1e-10
Identity = 46/82 (56.10%), Postives = 52/82 (63.41%), Query Frame = 1


Query: 8  SLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKK--EEEERSTEMAAWIPDPVTGYY 67
          S+ RRGY     AA+Q V S  A  G T RS  M KK  EE+ RSTE  +W+PDP TGYY
Sbjct: 22 SIARRGY----AAASQGVASSFAKTGAT-RSTVMSKKTGEEKARSTERVSWVPDPKTGYY 81

Query: 68 RPENYTIVIDEVDLRAMLLKPK 88
          RPEN    ID  +LRAMLLK K
Sbjct: 82 RPENRAEEIDVAELRAMLLKNK 98

[Close]

BLAST of CmaCh01G003050 vs. NCBI nr
Match: gi|778689326|ref|XP_011652940.1| (PREDICTED: late embryogenesis abundant protein Lea5-A-like [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09
Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 1


Query: 3  ISSLVSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEE----RSTEMAAWIP 62
          +++L  L RRGY              TA EGV AR GG++KK+EE     R  +  +W+P
Sbjct: 8  LNTLSILFRRGY-------------ATAPEGVAARLGGIMKKKEESLRIGREKKAVSWVP 67

Query: 63 DPVTGYYRPENYTIVIDEVDLRAMLL 85
          DPVTGYYRPEN    +D  DLRAMLL
Sbjct: 68 DPVTGYYRPENCGAEMDAADLRAMLL 80

[Close]

BLAST of CmaCh01G003050 vs. NCBI nr
Match: gi|363497938|gb|AEW24432.1| (late embryogenesis abundant protein 3L-1 [Camellia sinensis])

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-09
Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 7  VSLIRRGYRAGATAAAQRVVSGTAAEGVTARSGGMIKKEEEERSTEMAAWIPDPVTGYYR 66
          +++ RRGY     AA+Q V SG     VTAR G M KK+ EE +T+  +W+PDPVTGYYR
Sbjct: 21 LAVTRRGY----AAASQGVASGP----VTARGGVMGKKDGEEEATK-TSWVPDPVTGYYR 80

Query: 67 PENYTIVIDEVDLRAMLLKPK 88
          PEN    ID  +LR MLLK K
Sbjct: 81 PENKANEIDVAELREMLLKNK 92

The following BLAST results are available for this feature:

BLAST of CmaCh01G003050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAG21_ARATH	1.1e-08	44.44	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
LEA5A_GOSHI	4.3e-08	43.59	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 ...	[more]
LEA5D_GOSHI	4.3e-08	43.59	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 ...	[more]
ARG2_VIGRR	7.4e-08	40.86	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 ...	[more]
LEA5_CITSI	2.8e-07	41.18	Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1	[more]

BLAST of CmaCh01G003050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV78_CUCSA	3.1e-13	53.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001860 PE=4 SV=1	[more]
A0A059AX49_EUCGR	4.2e-10	56.10	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01104 PE=4 SV=1	[more]
A0A0A0KTB8_CUCSA	7.2e-10	47.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001850 PE=4 SV=1	[more]
G9HVM5_CAMSI	1.6e-09	53.09	Late embryogenesis abundant protein 3L-1 OS=Camellia sinensis GN=LEA3L-1 PE=2 SV...	[more]
A0A059AWU9_EUCGR	2.1e-09	54.88	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01103 PE=4 SV=1	[more]

BLAST of CmaCh01G003050 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02380.1	6.4e-10	44.44	senescence-associated gene 21	[more]
AT1G02820.1	5.4e-09	42.67	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G15910.1	8.7e-07	40.74	drought-induced 21	[more]

BLAST of CmaCh01G003050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700197661\|gb\|KGN52819.1\|	4.5e-13	53.19	hypothetical protein Csa_4G001860 [Cucumis sativus]	[more]
gi\|659108673\|ref\|XP_008454328.1\|	7.6e-13	58.75	PREDICTED: late embryogenesis abundant protein Lea5-A-like [Cucumis melo]	[more]
gi\|702435555\|ref\|XP_010069902.1\|	6.1e-10	56.10	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Eucalyptus grandis]	[more]
gi\|778689326\|ref\|XP_011652940.1\|	1.0e-09	47.67	PREDICTED: late embryogenesis abundant protein Lea5-A-like [Cucumis sativus]	[more]
gi\|363497938\|gb\|AEW24432.1\|	2.3e-09	53.09	late embryogenesis abundant protein 3L-1 [Camellia sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004926	LEA_3

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0071310	cellular response to organic substance
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0033554	cellular response to stress
biological_process	GO:0006952	defense response
biological_process	GO:0009605	response to external stimulus
biological_process	GO:0007165	signal transduction
biological_process	GO:0001101	response to acid chemical
biological_process	GO:0009409	response to cold
biological_process	GO:1901700	response to oxygen-containing compound
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003050.1	CmaCh01G003050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA5-type	PFAM	PF03242	LEA_3	coord: 8..84 score: 8.6
None	No IPR available	PANTHER	PTHR33509	FAMILY NOT NAMED	coord: 3..91 score: 8.9
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEIN	coord: 3..91 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G003050	Cucsa.097030	Cucumber (Gy14) v1	cgycmaB0199
CmaCh01G003050	Cucsa.205500	Cucumber (Gy14) v1	cgycmaB0607
CmaCh01G003050	Cla017401	Watermelon (97103) v1	cmawmB416
CmaCh01G003050	Csa4G001850	Cucumber (Chinese Long) v2	cmacuB475
CmaCh01G003050	MELO3C017949	Melon (DHL92) v3.5.1	cmameB434
CmaCh01G003050	ClCG10G011020	Watermelon (Charleston Gray)	cmawcgB387
CmaCh01G003050	CSPI04G00910	Wild cucumber (PI 183967)	cmacpiB478
CmaCh01G003050	CmoCh08G004230	Cucurbita moschata (Rifu)	cmacmoB490
CmaCh01G003050	CmoCh01G003180	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G003050	Lsi03G010810	Bottle gourd (USVL1VR-Ls)	cmalsiB422
CmaCh01G003050	Cp4.1LG17g07170	Cucurbita pepo (Zucchini)	cmacpeB472
CmaCh01G003050	Cp4.1LG02g16460	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G003050	MELO3C017949.2	Melon (DHL92) v3.6.1	cmamedB501
CmaCh01G003050	CsaV3_4G000870	Cucumber (Chinese Long) v3	cmacucB0567
CmaCh01G003050	Cla97C10G193930	Watermelon (97103) v2	cmawmbB445
CmaCh01G003050	Bhi11G001014	Wax gourd	cmawgoB0553
CmaCh01G003050	CsGy4G000790	Cucumber (Gy14) v2	cgybcmaB516
CmaCh01G003050	Carg11140	Silver-seed gourd	carcmaB1134
CmaCh01G003050	Carg07399	Silver-seed gourd	carcmaB1059
CmaCh01G003050	Carg07167	Silver-seed gourd	carcmaB0143

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G003050	CmaCh14G009090	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh01G003050	CmaCh08G004290	Cucurbita maxima (Rimu)	cmacmaB440

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G003050	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh01G003050	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G003050	Cucurbita moschata (Rifu)	cmacmoB466
CmaCh01G003050	Watermelon (Charleston Gray)	cmawcgB377
CmaCh01G003050	Watermelon (97103) v1	cmawmB407
CmaCh01G003050	Cucurbita pepo (Zucchini)	cmacpeB465
CmaCh01G003050	Cucurbita pepo (Zucchini)	cmacpeB494