CmaCh01G001960 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G001960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chaperone protein dnaJ 8
Location	Cma_Chr01 : 893316 .. 894693 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAAATTAACTCACTGGATAAGAACCGACGATCTCGCCTCTCCGCACCCTCCGTATCTAAAATCCTCTTCCTCTTCCTTTCTATTTAATTCGCTCTTCCCCTTTCTCGATCCCTCCAATTATATCCATCTTTGCATCGCTTTTGCCTCCGATTATCCTGGTTTTGAAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTAATGGCGTCTGTTTCTACTGCTGCTGGATTCATTGCCCGGACTGGTTCTTCGTCTTGGATTCGCCAACGAAATCGGGCGAACAAGCTTCATCGGAGTTCGAGGAATCAAGTTAGGGCTTCTTATTCTTCTTATTCCTCTTCTTCTATGGCTGATCCTTACCGGACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAAGCCTTCCGTCAACTCGCTCTTCAGGTTCGATTTCTCTCTCGCTCTCTCTGTCTCTCTATTCTTTCTCGATTTGTGGACTTCCTCATCTGATTCCTTGAATTTTATCGGTTTTTCAGTATCATCCGGATGTATGCAAAGGAAGTAATTGTGGAGTGCAATTTCATCAAATCAATGAAGCCTACGATGTACGTGATCCAAGCCCTAACTAATTAATTATCCTCTTCCATTATTGCATATATTATATTAATAATCGGATCAATTATTTGAATCGTTTTCTTAAAAATAAAAATAAAAATAAAAATAATTGAGCAGCAAACGCGGTAACTAGTATTGATTATGATTTCTTGTCGGAGTATTTTTAATTCGAGGCGTCAATCGAGTGTTTGGATCAGATCCATATCGGTTCATCTAATATTGAAATCGGTATACTTATCTGTTGCATATATCATTTTCATGTTAGTTCAATCACAATACAAAACTAATGTCATATATATTTGCGTCTGAAACAGATTGTGATGAACAATTTAAGAGGAATATCAATGCCAATCGAGACGTACGACGAAGGGGGTGACGAACCGATGAGGGGAATGGGGGATCCGGATTGGGATTTGTGGGAGGAATGGATGGGATGGGAAGGCGCAGGGATTCGAGATTATTCATCGCATATAAACCCGTACATTTAAATGAAATTGGTGTGAAGGAACATAATTTGTTCATAGAACTGAGCCCTAATCTATCAACATCATCCAATGGTGGTGGTTGCTTGTGCATATAATTTGGATAGGGAGAGATTGAAGAATGGCTCTGTCTTGATGTATCCACTTTTGTACATAAGGTCAAGACAATGGCTTTGGGTTTTAATAATAATGTGAGAAGGCTTTCAAGATGCCCTTTCGAATTTGTGGGCCCTTTGTGTCTTATCTTTTGTCCTATTTAAGATATTAAATGATTGTGAAGTTGGTAAGCTC

mRNA sequence

TCTAAAATTAACTCACTGGATAAGAACCGACGATCTCGCCTCTCCGCACCCTCCGTATCTAAAATCCTCTTCCTCTTCCTTTCTATTTAATTCGCTCTTCCCCTTTCTCGATCCCTCCAATTATATCCATCTTTGCATCGCTTTTGCCTCCGATTATCCTGGTTTTGAAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTAATGGCGTCTGTTTCTACTGCTGCTGGATTCATTGCCCGGACTGGTTCTTCGTCTTGGATTCGCCAACGAAATCGGGCGAACAAGCTTCATCGGAGTTCGAGGAATCAAGTTAGGGCTTCTTATTCTTCTTATTCCTCTTCTTCTATGGCTGATCCTTACCGGACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAAGCCTTCCGTCAACTCGCTCTTCAGTATCATCCGGATGTATGCAAAGGAAGTAATTGTGGAGTGCAATTTCATCAAATCAATGAAGCCTACGATATTGTGATGAACAATTTAAGAGGAATATCAATGCCAATCGAGACGTACGACGAAGGGGGTGACGAACCGATGAGGGGAATGGGGGATCCGGATTGGGATTTGTGGGAGGAATGGATGGGATGGGAAGGCGCAGGGATTCGAGATTATTCATCGCATATAAACCCGTACATTTAAATGAAATTGGTGTGAAGGAACATAATTTGTTCATAGAACTGAGCCCTAATCTATCAACATCATCCAATGGTGGTGGTTGCTTGTGCATATAATTTGGATAGGGAGAGATTGAAGAATGGCTCTGTCTTGATGTATCCACTTTTGTACATAAGGTCAAGACAATGGCTTTGGGTTTTAATAATAATGTGAGAAGGCTTTCAAGATGCCCTTTCGAATTTGTGGGCCCTTTGTGTCTTATCTTTTGTCCTATTTAAGATATTAAATGATTGTGAAGTTGGTAAGCTC

Coding sequence (CDS)

ATGGCGTCTGTTTCTACTGCTGCTGGATTCATTGCCCGGACTGGTTCTTCGTCTTGGATTCGCCAACGAAATCGGGCGAACAAGCTTCATCGGAGTTCGAGGAATCAAGTTAGGGCTTCTTATTCTTCTTATTCCTCTTCTTCTATGGCTGATCCTTACCGGACTCTTCGGATTCAACCTGGCGCCTCTGAATCTGAGGTCAAAAAAGCCTTCCGTCAACTCGCTCTTCAGTATCATCCGGATGTATGCAAAGGAAGTAATTGTGGAGTGCAATTTCATCAAATCAATGAAGCCTACGATATTGTGATGAACAATTTAAGAGGAATATCAATGCCAATCGAGACGTACGACGAAGGGGGTGACGAACCGATGAGGGGAATGGGGGATCCGGATTGGGATTTGTGGGAGGAATGGATGGGATGGGAAGGCGCAGGGATTCGAGATTATTCATCGCATATAAACCCGTACATTTAA

Protein sequence

MASVSTAAGFIARTGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIETYDEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI

Homology

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BLAST of CmaCh01G001960 vs. Swiss-Prot
Match: DNAJ8_ARATH (Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana GN=ATJ8 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.8e-39
Identity = 85/149 (57.05%), Postives = 104/149 (69.80%), Query Frame = 1


Query: 14  TGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGASESEVKKAFRQ 73
           + SSS+  + +R       +R++V  S    SSSS+ DPY+TL+I+P +SE EVKKAFRQ
Sbjct: 22  SSSSSFRLKNSRRKNTKMLNRSKVVCS----SSSSVMDPYKTLKIRPDSSEYEVKKAFRQ 81

Query: 74  LALQYHPDVCKGSNCGVQFHQINEAYDIVM----NNLRGIS--MPIETYDEGGDEPMRGM 133
           LA +YHPDVC+GSNCGVQF  INEAYDIV+    N + G     P + YDEG    + GM
Sbjct: 82  LAKKYHPDVCRGSNCGVQFQTINEAYDIVLKQIKNQMEGTEEFEPFDVYDEG----LNGM 141

Query: 134 GDPDWDLWEEWMGWEGAGIRDYSSHINPY 157
            DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 142 NDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of CmaCh01G001960 vs. Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 36/97 (37.11%), Postives = 60/97 (61.86%), Query Frame = 1


Query: 53  YRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP 112
           Y  L ++P A++ E+KKA+R+LAL+YHPD  K  N G +F QI++AY+++ +     S  
Sbjct: 8   YDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLAD-----SKK 67

Query: 113 IETYDEGGDEPMR------GMGDPDWDLWEEWMGWEG 144
            E YD+GG++ ++      G G P  D+++ + G  G
Sbjct: 68  RELYDKGGEQAIKEGGAGGGFGSP-MDIFDMFFGGGG 96

[Close]

BLAST of CmaCh01G001960 vs. Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 36/97 (37.11%), Postives = 60/97 (61.86%), Query Frame = 1


Query: 53  YRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP 112
           Y  L ++P A++ E+KKA+R+LAL+YHPD  K  N G +F QI++AY+++ +     S  
Sbjct: 8   YDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLAD-----SKK 67

Query: 113 IETYDEGGDEPMR------GMGDPDWDLWEEWMGWEG 144
            E YD+GG++ ++      G G P  D+++ + G  G
Sbjct: 68  RELYDKGGEQAIKEGGAGGGFGSP-MDIFDMFFGGGG 96

[Close]

BLAST of CmaCh01G001960 vs. Swiss-Prot
Match: DNAJ_BIFLO (Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC 2705) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-09
Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 49  MADPYRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRG 108
           MAD Y TL ++ GAS+ E+KKA+R+L+ +YHPD+  G     +F ++N AYD++ N  + 
Sbjct: 1   MADYYETLGVERGASDDEIKKAYRKLSRKYHPDIA-GPEFEDKFKEVNNAYDVLSNPDKR 60

Query: 109 ISMPIETYDEGGD--EPMRGMGDPDWDLWEEWMGWEGAGIRDYS 151
                  YD G D   P  G G           G+ GAG  D S
Sbjct: 61  -----RMYDSGVDPNNPNAGAG-----------GFSGAGFGDMS 87

[Close]

BLAST of CmaCh01G001960 vs. Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 6.7e-09
Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 1


Query: 53  YRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP 112
           Y  L ++P A++ E+KKA+R+LAL+YHPD  K  N G +F QI++AY+++ +     +  
Sbjct: 8   YDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVLSD-----AKK 67

Query: 113 IETYDEGGDEPMR------GMGDPDWDLWEEWMGWEG 144
            E YD+GG++ ++      G G P  D+++ + G  G
Sbjct: 68  RELYDKGGEQAIKEGGAGGGFGSP-MDIFDMFFGGGG 96

[Close]

BLAST of CmaCh01G001960 vs. TrEMBL
Match: Q2L989_CAMSI (Putative DnaJ protein OS=Camellia sinensis PE=2 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 3.1e-53
Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 4   VSTAAGFIAR-TGSSSWIRQRNRANKLHRSSRNQVRASYSSY-SSSSMADPYRTLRIQPG 63
           +++ AG I R  GSSSWI+ +N   K      ++VR   +SY +SS++ DPY+TLRIQPG
Sbjct: 1   MASVAGMIGRGCGSSSWIQLKNSKKKKAMRKNDRVRVCTASYSASSAVTDPYKTLRIQPG 60

Query: 64  ASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGIS-MP----IETY 123
           ASESEVKKAFRQLALQYHPDVC+G+NCGVQFH INEAYDIVM+NLRG S +P     E+Y
Sbjct: 61  ASESEVKKAFRQLALQYHPDVCRGNNCGVQFHHINEAYDIVMSNLRGESTLPEMEMYESY 120

Query: 124 DEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
           D   DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 D--ADEPMRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of CmaCh01G001960 vs. TrEMBL
Match: A0A061GAB8_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_027478 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 108/157 (68.79%), Postives = 123/157 (78.34%), Query Frame = 1


Query: 4   VSTAAGFIARTGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGAS 63
           +++A G I R GSSSW++ + +  K    + N+VR   S+   SS+ DPY+TLRIQ GAS
Sbjct: 1   MASAVGMIGRNGSSSWMQVKGKGKK---KTVNRVRVRCSA---SSVMDPYKTLRIQRGAS 60

Query: 64  ESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRG---ISMPIETYDEGG 123
           ESEVKKAFRQLALQYHPDVC+GSNCGVQF  INEAYDIVM+N RG    S   E YDEG 
Sbjct: 61  ESEVKKAFRQLALQYHPDVCRGSNCGVQFQTINEAYDIVMSNFRGESNESRMYEAYDEGI 120

Query: 124 DEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
           DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 DEPMRGMDDPDWDMWEEWMGWEGAGIRDYSSHINPYI 151

[Close]

BLAST of CmaCh01G001960 vs. TrEMBL
Match: M5WS61_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012860mg PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-52
Identity = 106/156 (67.95%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 5   STAAGFIARTGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGASE 64
           + AAG I   GSS W   +++  K    ++  V   YSS     + DPY+TL+IQPGASE
Sbjct: 3   AVAAGVIGGNGSS-WNLFKDKPRKKKTVNKVMVSCVYSS-----VMDPYQTLKIQPGASE 62

Query: 65  SEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP---IETYDEGGD 124
           SEV+KAFRQLAL+YHPDVC+G+NCGVQFHQINEAYDIVM+NLRG S P    ETYDEG D
Sbjct: 63  SEVRKAFRQLALKYHPDVCRGNNCGVQFHQINEAYDIVMSNLRGESTPSPMYETYDEGVD 122

Query: 125 EPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
           EPMRGM DPDWD+WEEWMGWEGAGIRDY+SHINPYI
Sbjct: 123 EPMRGMNDPDWDMWEEWMGWEGAGIRDYTSHINPYI 152

[Close]

BLAST of CmaCh01G001960 vs. TrEMBL
Match: A0A0B2P4K3_GLYSO (Chaperone protein dnaJ 8, chloroplastic OS=Glycine soja GN=glysoja_032687 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-52
Identity = 105/158 (66.46%), Postives = 124/158 (78.48%), Query Frame = 1


Query: 5   STAAGFIARTGSS-SWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGAS 64
           +  AG +   GSS SW+R + +  K  + +++++  SYSS    S+ DPY+TLRIQ GAS
Sbjct: 3   AATAGVVGGNGSSASWMRFKGKERKQTKMNKSRISCSYSS----SVMDPYKTLRIQRGAS 62

Query: 65  ESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIET----YDEG 124
           ESEV+KAFRQLALQYHPDVC+GSNCGVQFH+INEAYDIVM NLRG S   E+    YD G
Sbjct: 63  ESEVRKAFRQLALQYHPDVCRGSNCGVQFHEINEAYDIVMANLRGESNATESYEAYYDAG 122

Query: 125 GDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
            DEP+RGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 123 IDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 156

[Close]

BLAST of CmaCh01G001960 vs. TrEMBL
Match: M1B4C5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014210 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.6e-52
Identity = 106/163 (65.03%), Postives = 127/163 (77.91%), Query Frame = 1


Query: 4   VSTAAGFIARTG-----SSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRI 63
           ++TA G +   G     S+S  R RN A K  R+ +N  R S   YSSS++ADPY+TL+I
Sbjct: 1   MATAMGMMGSIGGCGAASASLFRLRNSAKKKTRNDKNGFRVS-CVYSSSAVADPYKTLKI 60

Query: 64  QPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP----IE 123
           QPGASESEV+KAFRQLAL+YHPDVC+G+NCGVQFHQINEAYD+VM+NLRG +      IE
Sbjct: 61  QPGASESEVRKAFRQLALKYHPDVCRGNNCGVQFHQINEAYDVVMSNLRGETRAELEMIE 120

Query: 124 TYDEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
            YD+  DE MRGM +PDWDLWEEWMGWEGAGIRDY+SH+NPYI
Sbjct: 121 EYDDSNDESMRGMYEPDWDLWEEWMGWEGAGIRDYTSHVNPYI 162

[Close]

BLAST of CmaCh01G001960 vs. TAIR10
Match: AT1G80920.1 (AT1G80920.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-40
Identity = 85/149 (57.05%), Postives = 104/149 (69.80%), Query Frame = 1


Query: 14  TGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGASESEVKKAFRQ 73
           + SSS+  + +R       +R++V  S    SSSS+ DPY+TL+I+P +SE EVKKAFRQ
Sbjct: 22  SSSSSFRLKNSRRKNTKMLNRSKVVCS----SSSSVMDPYKTLKIRPDSSEYEVKKAFRQ 81

Query: 74  LALQYHPDVCKGSNCGVQFHQINEAYDIVM----NNLRGIS--MPIETYDEGGDEPMRGM 133
           LA +YHPDVC+GSNCGVQF  INEAYDIV+    N + G     P + YDEG    + GM
Sbjct: 82  LAKKYHPDVCRGSNCGVQFQTINEAYDIVLKQIKNQMEGTEEFEPFDVYDEG----LNGM 141

Query: 134 GDPDWDLWEEWMGWEGAGIRDYSSHINPY 157
            DPD D WEEWMGWEGAG RDYSSH+NPY
Sbjct: 142 NDPDCDTWEEWMGWEGAGTRDYSSHVNPY 162

[Close]

BLAST of CmaCh01G001960 vs. TAIR10
Match: AT1G72070.1 (AT1G72070.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-11
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 1


Query: 53  YRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP 112
           Y  L + P AS++EVK+AF++LAL+YHPDV KG +    F +I  AY+ +M   +     
Sbjct: 41  YTVLGLTPLASQTEVKRAFKRLALKYHPDVHKGQD--KDFKEIKSAYECLMQKFKKEEEE 100

Query: 113 IETYDEGGDEPMRGMGDPDWDLWEEWMGWEG 144
           +E  + G           + D WEEWMG+EG
Sbjct: 101 MEITEMG-----------EIDEWEEWMGFEG 118

[Close]

BLAST of CmaCh01G001960 vs. TAIR10
Match: AT5G59610.1 (AT5G59610.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 44  YSSSSMADPYRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVM 103
           + + + + PY  L + P A+  ++K+A+R+LAL+YHPDV K +N   +F +I  AY  ++
Sbjct: 66  FVTRARSSPYEILGVSPSATPQDIKRAYRKLALKYHPDVNKEANAQEKFLKIKHAYTTLI 125

Query: 104 NN-----------LRGISMPIETYDEGG---DEPMRGMGDPDWDLWEEWMGWEGA 145
           N+             G S   +T  +G    +E   G+GD   DL EE+  WE +
Sbjct: 126 NSDSRRKYGSDSRATGSSTG-QTSRKGNSQVEEDFYGLGDFFKDLQEEYKNWEAS 179

[Close]

BLAST of CmaCh01G001960 vs. TAIR10
Match: AT3G05345.1 (AT3G05345.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 1


Query: 48  SMADPYRTLRIQPGASESEVKKAFRQLALQYHPDVCK-GSNCGVQFHQINEAYDIVMNNL 107
           S + PY  L ++P  S SE+K AFR    QYHPDV K GSN  +   +I +AY+++ N  
Sbjct: 41  SSSSPYSILGVEPSCSSSELKAAFRAKVKQYHPDVNKDGSNSDIMIRRIIQAYEMLTNYS 100

[Close]

BLAST of CmaCh01G001960 vs. TAIR10
Match: AT3G08970.1 (AT3G08970.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 1


Query: 51  DPYRTLRIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGIS 110
           DPY+ L +   A + E++KAF + +L+YHPD  K      +F +IN AY+I+ +  +   
Sbjct: 27  DPYKVLGVSKDAKQREIQKAFHKQSLKYHPDKNKDKGAQEKFAEINNAYEILSDEEKR-- 86

Query: 111 MPIETYDEGGDEPMRGMGDPDWD 134
              + YD  GDE     G P +D
Sbjct: 87  ---KNYDLYGDE----KGQPGFD 100

[Close]

BLAST of CmaCh01G001960 vs. NCBI nr
Match: gi|659130374|ref|XP_008465135.1| (PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 3.6e-63
Identity = 134/165 (81.21%), Postives = 141/165 (85.45%), Query Frame = 1


Query: 1   MASVSTAAGFIARTGSSS----WIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTL 60
           MASV+TA GFIAR+ SSS     IR  NR  K +R+S NQ+R S S  SSSS+ADPYRTL
Sbjct: 1   MASVATA-GFIARSSSSSSSSSCIRNTNRPKK-NRTSSNQLRVSCS--SSSSVADPYRTL 60

Query: 61  RIQPGASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIET- 120
           RIQPGASESEVKKAFR LALQYHPDVC+GSNCGVQFHQINEAYDIVMNNLRGIS PIET 
Sbjct: 61  RIQPGASESEVKKAFRHLALQYHPDVCRGSNCGVQFHQINEAYDIVMNNLRGISTPIETY 120

Query: 121 ---YDEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
              YDEG DEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 ETIYDEGIDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 161

[Close]

BLAST of CmaCh01G001960 vs. NCBI nr
Match: gi|145688390|gb|ABC69274.2| (putative DnaJ protein [Camellia sinensis])

HSP 1 Score: 216.1 bits (549), Expect = 4.4e-53
Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 4   VSTAAGFIAR-TGSSSWIRQRNRANKLHRSSRNQVRASYSSY-SSSSMADPYRTLRIQPG 63
           +++ AG I R  GSSSWI+ +N   K      ++VR   +SY +SS++ DPY+TLRIQPG
Sbjct: 1   MASVAGMIGRGCGSSSWIQLKNSKKKKAMRKNDRVRVCTASYSASSAVTDPYKTLRIQPG 60

Query: 64  ASESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGIS-MP----IETY 123
           ASESEVKKAFRQLALQYHPDVC+G+NCGVQFH INEAYDIVM+NLRG S +P     E+Y
Sbjct: 61  ASESEVKKAFRQLALQYHPDVCRGNNCGVQFHHINEAYDIVMSNLRGESTLPEMEMYESY 120

Query: 124 DEGGDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
           D   DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 D--ADEPMRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 159

[Close]

BLAST of CmaCh01G001960 vs. NCBI nr
Match: gi|590616291|ref|XP_007023465.1| (Chaperone DnaJ-domain superfamily protein [Theobroma cacao])

HSP 1 Score: 213.4 bits (542), Expect = 2.9e-52
Identity = 108/157 (68.79%), Postives = 123/157 (78.34%), Query Frame = 1


Query: 4   VSTAAGFIARTGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGAS 63
           +++A G I R GSSSW++ + +  K    + N+VR   S+   SS+ DPY+TLRIQ GAS
Sbjct: 1   MASAVGMIGRNGSSSWMQVKGKGKK---KTVNRVRVRCSA---SSVMDPYKTLRIQRGAS 60

Query: 64  ESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRG---ISMPIETYDEGG 123
           ESEVKKAFRQLALQYHPDVC+GSNCGVQF  INEAYDIVM+N RG    S   E YDEG 
Sbjct: 61  ESEVKKAFRQLALQYHPDVCRGSNCGVQFQTINEAYDIVMSNFRGESNESRMYEAYDEGI 120

Query: 124 DEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
           DEPMRGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 121 DEPMRGMDDPDWDMWEEWMGWEGAGIRDYSSHINPYI 151

[Close]

BLAST of CmaCh01G001960 vs. NCBI nr
Match: gi|595923676|ref|XP_007214842.1| (hypothetical protein PRUPE_ppa012860mg [Prunus persica])

HSP 1 Score: 211.8 bits (538), Expect = 8.4e-52
Identity = 106/156 (67.95%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 5   STAAGFIARTGSSSWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGASE 64
           + AAG I   GSS W   +++  K    ++  V   YSS     + DPY+TL+IQPGASE
Sbjct: 3   AVAAGVIGGNGSS-WNLFKDKPRKKKTVNKVMVSCVYSS-----VMDPYQTLKIQPGASE 62

Query: 65  SEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMP---IETYDEGGD 124
           SEV+KAFRQLAL+YHPDVC+G+NCGVQFHQINEAYDIVM+NLRG S P    ETYDEG D
Sbjct: 63  SEVRKAFRQLALKYHPDVCRGNNCGVQFHQINEAYDIVMSNLRGESTPSPMYETYDEGVD 122

Query: 125 EPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
           EPMRGM DPDWD+WEEWMGWEGAGIRDY+SHINPYI
Sbjct: 123 EPMRGMNDPDWDMWEEWMGWEGAGIRDYTSHINPYI 152

[Close]

BLAST of CmaCh01G001960 vs. NCBI nr
Match: gi|734321530|gb|KHN04191.1| (Chaperone protein dnaJ 8, chloroplastic [Glycine soja])

HSP 1 Score: 211.8 bits (538), Expect = 8.4e-52
Identity = 105/158 (66.46%), Postives = 124/158 (78.48%), Query Frame = 1


Query: 5   STAAGFIARTGSS-SWIRQRNRANKLHRSSRNQVRASYSSYSSSSMADPYRTLRIQPGAS 64
           +  AG +   GSS SW+R + +  K  + +++++  SYSS    S+ DPY+TLRIQ GAS
Sbjct: 3   AATAGVVGGNGSSASWMRFKGKERKQTKMNKSRISCSYSS----SVMDPYKTLRIQRGAS 62

Query: 65  ESEVKKAFRQLALQYHPDVCKGSNCGVQFHQINEAYDIVMNNLRGISMPIET----YDEG 124
           ESEV+KAFRQLALQYHPDVC+GSNCGVQFH+INEAYDIVM NLRG S   E+    YD G
Sbjct: 63  ESEVRKAFRQLALQYHPDVCRGSNCGVQFHEINEAYDIVMANLRGESNATESYEAYYDAG 122

Query: 125 GDEPMRGMGDPDWDLWEEWMGWEGAGIRDYSSHINPYI 158
            DEP+RGM DPDWD+WEEWMGWEGAGIRDYSSHINPYI
Sbjct: 123 IDEPLRGMNDPDWDMWEEWMGWEGAGIRDYSSHINPYI 156

The following BLAST results are available for this feature:

BLAST of CmaCh01G001960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DNAJ8_ARATH	4.8e-39	57.05	Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana GN=ATJ8 PE=2 SV=...	[more]
DNJA1_RAT	3.0e-09	37.11	DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=1 SV=1	[more]
DNJA1_MOUSE	3.0e-09	37.11	DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1	[more]
DNAJ_BIFLO	5.1e-09	37.50	Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC 2705) GN=dnaJ PE=3 ...	[more]
DNJA1_HUMAN	6.7e-09	36.08	DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2	[more]

BLAST of CmaCh01G001960 vs. TrEMBL


Match Name	E-value	Identity	Description
Q2L989_CAMSI	3.1e-53	68.94	Putative DnaJ protein OS=Camellia sinensis PE=2 SV=2	[more]
A0A061GAB8_THECC	2.0e-52	68.79	Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_027478 PE=4 ...	[more]
M5WS61_PRUPE	5.8e-52	67.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012860mg PE=4 SV=1	[more]
A0A0B2P4K3_GLYSO	5.8e-52	66.46	Chaperone protein dnaJ 8, chloroplastic OS=Glycine soja GN=glysoja_032687 PE=4 S...	[more]
M1B4C5_SOLTU	7.6e-52	65.03	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014210 PE=4 SV=1	[more]

BLAST of CmaCh01G001960 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80920.1	2.7e-40	57.05	Chaperone DnaJ-domain superfamily protein	[more]
AT1G72070.1	3.4e-11	39.56	Chaperone DnaJ-domain superfamily protein	[more]
AT5G59610.1	2.4e-09	32.17	Chaperone DnaJ-domain superfamily protein	[more]
AT3G05345.1	1.0e-07	44.26	Chaperone DnaJ-domain superfamily protein	[more]
AT3G08970.1	2.3e-07	34.94	DNAJ heat shock N-terminal domain-containing protein	[more]

BLAST of CmaCh01G001960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130374\|ref\|XP_008465135.1\|	3.6e-63	81.21	PREDICTED: chaperone protein dnaJ 8, chloroplastic [Cucumis melo]	[more]
gi\|145688390\|gb\|ABC69274.2\|	4.4e-53	68.94	putative DnaJ protein [Camellia sinensis]	[more]
gi\|590616291\|ref\|XP_007023465.1\|	2.9e-52	68.79	Chaperone DnaJ-domain superfamily protein [Theobroma cacao]	[more]
gi\|595923676\|ref\|XP_007214842.1\|	8.4e-52	67.95	hypothetical protein PRUPE_ppa012860mg [Prunus persica]	[more]
gi\|734321530\|gb\|KHN04191.1\|	8.4e-52	66.46	Chaperone protein dnaJ 8, chloroplastic [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G001960.1	CmaCh01G001960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 71..86 score: 4.8E-11coord: 87..107 score: 4.8E-11coord: 53..71 score: 4.8
IPR001623	DnaJ domain	GENE3D	G3DSA:1.10.287.110		coord: 44..128 score: 6.0
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 51..104 score: 2.7
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 50..107 score: 3.2
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 51..120 score: 15
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 47..143 score: 1.44
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 2..101 score: 3.2
None	No IPR available	PANTHER	PTHR24078:SF231	CHAPERONE PROTEIN DNAJ	coord: 2..101 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G001960	Csa3G710780	Cucumber (Chinese Long) v2	cmacuB452
CmaCh01G001960	CSPI03G30270	Wild cucumber (PI 183967)	cmacpiB455
CmaCh01G001960	CmoCh01G002030	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G001960	Cp4.1LG02g15260	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G001960	CsaV3_3G032720	Cucumber (Chinese Long) v3	cmacucB0544
CmaCh01G001960	Carg04186	Silver-seed gourd	carcmaB0278

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G001960	Wild cucumber (PI 183967)	cmacpiB456
CmaCh01G001960	Wild cucumber (PI 183967)	cmacpiB501
CmaCh01G001960	Cucumber (Chinese Long) v2	cmacuB453
CmaCh01G001960	Cucumber (Chinese Long) v2	cmacuB502
CmaCh01G001960	Melon (DHL92) v3.5.1	cmameB426
CmaCh01G001960	Watermelon (Charleston Gray)	cmawcgB378
CmaCh01G001960	Watermelon (Charleston Gray)	cmawcgB387
CmaCh01G001960	Watermelon (97103) v1	cmawmB408
CmaCh01G001960	Watermelon (97103) v1	cmawmB416
CmaCh01G001960	Cucurbita pepo (Zucchini)	cmacpeB465
CmaCh01G001960	Cucurbita pepo (Zucchini)	cmacpeB472
CmaCh01G001960	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G001960	Bottle gourd (USVL1VR-Ls)	cmalsiB418
CmaCh01G001960	Bottle gourd (USVL1VR-Ls)	cmalsiB422
CmaCh01G001960	Bottle gourd (USVL1VR-Ls)	cmalsiB439
CmaCh01G001960	Cucumber (Gy14) v2	cgybcmaB366
CmaCh01G001960	Cucumber (Gy14) v2	cgybcmaB938
CmaCh01G001960	Melon (DHL92) v3.6.1	cmamedB461
CmaCh01G001960	Melon (DHL92) v3.6.1	cmamedB489
CmaCh01G001960	Silver-seed gourd	carcmaB0498
CmaCh01G001960	Silver-seed gourd	carcmaB0626
CmaCh01G001960	Silver-seed gourd	carcmaB1134
CmaCh01G001960	Cucumber (Chinese Long) v3	cmacucB0545
CmaCh01G001960	Cucumber (Chinese Long) v3	cmacucB0595
CmaCh01G001960	Watermelon (97103) v2	cmawmbB445
CmaCh01G001960	Watermelon (97103) v2	cmawmbB509
CmaCh01G001960	Wax gourd	cmawgoB0553
CmaCh01G001960	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh01G001960	Cucurbita maxima (Rimu)	cmacmaB360
CmaCh01G001960	Cucurbita maxima (Rimu)	cmacmaB440
CmaCh01G001960	Cucumber (Gy14) v1	cgycmaB0238
CmaCh01G001960	Cucumber (Gy14) v1	cgycmaB0499
CmaCh01G001960	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G001960	Cucurbita moschata (Rifu)	cmacmoB466
CmaCh01G001960	Cucurbita moschata (Rifu)	cmacmoB490