CmaCh01G001410 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTCGCTTCCTCTTCCTGCATTATCAGGTAAAGAAAGAACACCCTTTCAGCCTTTTTTTCATCAGCTGAAAAAAATTGTAACTTTTGTGTGTCTCAGCTCCGGCAGCGGGGGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCGTAGGAAAGTGCTTGAATTGCCGGCCGTGTACGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATAA ATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTCGCTTCCTCTTCCTGCATTATCAGCTCCGGCAGCGGGGGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCGTAGGAAAGTGCTTGAATTGCCGGCCGTGTACGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATAA ATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTCGCTTCCTCTTCCTGCATTATCAGCTCCGGCAGCGGGGGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCGTAGGAAAGTGCTTGAATTGCCGGCCGTGTACGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATAA MASPSNLLKLVIAVAVAAVFSLSLPLPALSAPAAGGGESLWKKMVLGSKPPRCVGKCLNCRPCTASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
BLAST of CmaCh01G001410 vs. Swiss-Prot
Match: EPFL8_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana GN=EPFL8 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TrEMBL
Match: A0A0A0KWT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G005010 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 6.2e-37 Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TrEMBL
Match: A0A0D2VJX4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G083500 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.4e-19 Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TrEMBL
Match: V4SIQ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027032mg PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.6e-19 Identity = 57/98 (58.16%), Postives = 66/98 (67.35%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TrEMBL
Match: K7KZD9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G030700 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18 Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TrEMBL
Match: A0A067KQ04_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06144 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.2e-18 Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TAIR10
Match: AT1G80133.1 (AT1G80133.1 unknown protein) HSP 1 Score: 53.9 bits (128), Expect = 7.0e-08 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related) HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06 Identity = 27/63 (42.86%), Postives = 28/63 (44.44%), Query Frame = 1
BLAST of CmaCh01G001410 vs. TAIR10
Match: AT4G37810.1 (AT4G37810.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 5.0e-06 Identity = 25/78 (32.05%), Postives = 38/78 (48.72%), Query Frame = 1
BLAST of CmaCh01G001410 vs. NCBI nr
Match: gi|449468980|ref|XP_004152199.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 8.8e-37 Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 1
BLAST of CmaCh01G001410 vs. NCBI nr
Match: gi|659108507|ref|XP_008454238.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]) HSP 1 Score: 152.1 bits (383), Expect = 5.4e-34 Identity = 81/108 (75.00%), Postives = 86/108 (79.63%), Query Frame = 1
BLAST of CmaCh01G001410 vs. NCBI nr
Match: gi|823242805|ref|XP_012454066.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Gossypium raimondii]) HSP 1 Score: 102.4 bits (254), Expect = 4.9e-19 Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 1
BLAST of CmaCh01G001410 vs. NCBI nr
Match: gi|567869311|ref|XP_006427277.1| (hypothetical protein CICLE_v10027032mg [Citrus clementina]) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18 Identity = 57/98 (58.16%), Postives = 66/98 (67.35%), Query Frame = 1
BLAST of CmaCh01G001410 vs. NCBI nr
Match: gi|1021562136|ref|XP_016172243.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8 [Arachis ipaensis]) HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18 Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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