CmaCh00G005010 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh00G005010
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAuxin-responsive protein
LocationCma_Chr00 : 36140609 .. 36141037 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGAGTATGGGGCCCAAGGAATGATAGATTTCATGAACGAAAGCAAGTTGATGGATCTTCTAAACAGCTCTGAATACGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTCCCATGGGAGTAAGTTGCTTATCTCTACGGCCAATCAACTTTTACATCCGTTAATCTAATTATGCTTTATACTTTTAGGATGTTCGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCGGAAGCTATCGGGCTCGGTATGTATAAAAAGTTTATAATACATAAGAAATAAGATTTGCATTTAAGCCCCTAAAGTAAGTGGGAATTACATTTTGCAGCCCCAAGAGCGATGGAAAAATGCAAAAGCAGAAGCTGAAAGAGGAGTCTGATTGCAATATTTGTGTTTTTTTTTTTTTTT

mRNA sequence

GGTGAGTATGGGGCCCAAGGAATGATAGATTTCATGAACGAAAGCAAGTTGATGGATCTTCTAAACAGCTCTGAATACGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTCCCATGGGAGATGTTCGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCGGAAGCTATCGGGCTCGCCCCAAGAGCGATGGAAAAATGCAAAAGCAGAAGCTGAAAGAGGAGTCTGATTGCAATATTTGTGTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGATAGATTTCATGAACGAAAGCAAGTTGATGGATCTTCTAAACAGCTCTGAATACGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTCCCATGGGAGATGTTCGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCGGAAGCTATCGGGCTCGCCCCAAGAGCGATGGAAAAATGCAAAAGCAGAAGCTGA

Protein sequence

MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Homology
[Close]
BLAST of CmaCh00G005010 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-32
Identity = 64/71 (90.14%), Postives = 69/71 (97.18%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           M DFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGLA
Sbjct: 166 MKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLA 225

Query: 61  PRAMEKCKSRS 72
           PRA+EKCK+RS
Sbjct: 226 PRALEKCKNRS 236

[Close]
BLAST of CmaCh00G005010 vs. Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.5e-32
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GLA
Sbjct: 172 MIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLA 231

Query: 61  PRAMEK-CKSRS 72
           PRAMEK CK+RS
Sbjct: 232 PRAMEKYCKNRS 243

[Close]
BLAST of CmaCh00G005010 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 4.3e-32
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESK+MDLLNSSEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLA
Sbjct: 158 MIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLA 217

Query: 61  PRAMEKCKSRS 72
           PRAMEK K+RS
Sbjct: 218 PRAMEKFKNRS 228

[Close]
BLAST of CmaCh00G005010 vs. Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 1 

Query: 2   IDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAP 61
           ++ MNESK+ DLLN SEYVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEAIGLAP
Sbjct: 208 VNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAP 267

Query: 62  RAMEKCKSRS 72
           RAMEKCK+RS
Sbjct: 268 RAMEKCKNRS 277

[Close]
BLAST of CmaCh00G005010 vs. Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-31
Identity = 61/71 (85.92%), Postives = 68/71 (95.77%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNE KLMDL+NS +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLA
Sbjct: 159 MIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLA 218

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSR+
Sbjct: 219 PRAMEKCKSRA 229

[Close]
BLAST of CmaCh00G005010 vs. TrEMBL
Match: A0A0A0LA18_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_3G143570 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 167 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 226

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSRS
Sbjct: 227 PRAMEKCKSRS 237

[Close]
BLAST of CmaCh00G005010 vs. TrEMBL
Match: A0A067L874_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_02272 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 171 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 230

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSR+
Sbjct: 231 PRAMEKCKSRT 241

[Close]
BLAST of CmaCh00G005010 vs. TrEMBL
Match: B9RTF4_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0909070 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 111 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 170

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSR+
Sbjct: 171 PRAMEKCKSRT 181

[Close]
BLAST of CmaCh00G005010 vs. TrEMBL
Match: A0A059B489_EUCGR (Auxin-responsive protein OS=Eucalyptus grandis GN=EUGRSUZ_H03170 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 173 MIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 232

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSRS
Sbjct: 233 PRAMEKCKSRS 243

[Close]
BLAST of CmaCh00G005010 vs. TrEMBL
Match: M5XGE5_PRUPE (Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010698mg PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 169 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 228

Query: 61  PRAMEKCKSRS 72
           PRAMEKCK+RS
Sbjct: 229 PRAMEKCKNRS 239

[Close]
BLAST of CmaCh00G005010 vs. TAIR10
Match: AT3G04730.1 (AT3G04730.1 indoleacetic acid-induced protein 16)

HSP 1 Score: 139.8 bits (351), Expect = 6.4e-34
Identity = 64/71 (90.14%), Postives = 69/71 (97.18%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           M DFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGLA
Sbjct: 166 MKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLA 225

Query: 61  PRAMEKCKSRS 72
           PRA+EKCK+RS
Sbjct: 226 PRALEKCKNRS 236

[Close]
BLAST of CmaCh00G005010 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-33
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GLA
Sbjct: 172 MIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLA 231

Query: 61  PRAMEK-CKSRS 72
           PRAMEK CK+RS
Sbjct: 232 PRAMEKYCKNRS 243

[Close]
BLAST of CmaCh00G005010 vs. TAIR10
Match: AT4G14550.1 (AT4G14550.1 indole-3-acetic acid inducible 14)

HSP 1 Score: 137.9 bits (346), Expect = 2.4e-33
Identity = 65/71 (91.55%), Postives = 69/71 (97.18%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESK+MDLLNSSEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLA
Sbjct: 158 MIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLA 217

Query: 61  PRAMEKCKSRS 72
           PRAMEK K+RS
Sbjct: 218 PRAMEKFKNRS 228

[Close]
BLAST of CmaCh00G005010 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 134.8 bits (338), Expect = 2.1e-32
Identity = 61/71 (85.92%), Postives = 68/71 (95.77%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNE KLMDL+NS +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLA
Sbjct: 159 MIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLA 218

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSR+
Sbjct: 219 PRAMEKCKSRA 229

[Close]
BLAST of CmaCh00G005010 vs. TAIR10
Match: AT4G29080.1 (AT4G29080.1 phytochrome-associated protein 2)

HSP 1 Score: 117.5 bits (293), Expect = 3.4e-27
Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 1 

Query: 3   DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPR 62
           D +NES+L DLL  SEYV TYEDKD DWMLVGDVPWEMF+ SCK+LRIMK SEAIGLAPR
Sbjct: 237 DGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPR 296

Query: 63  AMEKCKSRS 72
            MEKC+SR+
Sbjct: 297 VMEKCRSRN 305

[Close]
BLAST of CmaCh00G005010 vs. NCBI nr
Match: gi|449432618|ref|XP_004134096.1| (PREDICTED: auxin-responsive protein IAA14 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 167 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 226

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSRS
Sbjct: 227 PRAMEKCKSRS 237

[Close]
BLAST of CmaCh00G005010 vs. NCBI nr
Match: gi|659076266|ref|XP_008438588.1| (PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 167 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 226

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSRS
Sbjct: 227 PRAMEKCKSRS 237

[Close]
BLAST of CmaCh00G005010 vs. NCBI nr
Match: gi|802581515|ref|XP_012069759.1| (PREDICTED: auxin-responsive protein IAA14-like [Jatropha curcas])

HSP 1 Score: 148.7 bits (374), Expect = 3.9e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 171 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 230

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSR+
Sbjct: 231 PRAMEKCKSRT 241

[Close]
BLAST of CmaCh00G005010 vs. NCBI nr
Match: gi|255551957|ref|XP_002517023.1| (PREDICTED: auxin-responsive protein IAA7 [Ricinus communis])

HSP 1 Score: 148.7 bits (374), Expect = 3.9e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 111 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 170

Query: 61  PRAMEKCKSRS 72
           PRAMEKCKSR+
Sbjct: 171 PRAMEKCKSRT 181

[Close]
BLAST of CmaCh00G005010 vs. NCBI nr
Match: gi|596208164|ref|XP_007223810.1| (hypothetical protein PRUPE_ppa010698mg [Prunus persica])

HSP 1 Score: 148.7 bits (374), Expect = 3.9e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1   MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 60
           MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA
Sbjct: 169 MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 228

Query: 61  PRAMEKCKSRS 72
           PRAMEKCK+RS
Sbjct: 229 PRAMEKCKNRS 239

The following BLAST results are available for this feature:
BLAST of CmaCh00G005010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA16_ARATH1.1e-3290.14Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1[more]
IAA7_ARATH2.5e-3291.67Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1[more]
IAA14_ARATH4.3e-3291.55Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2[more]
IAA30_ORYSJ3.7e-3188.57Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=... [more]
IAA17_ARATH3.7e-3185.92Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2[more]
BLAST of CmaCh00G005010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA18_CUCSA1.2e-33100.00Auxin-responsive protein OS=Cucumis sativus GN=Csa_3G143570 PE=3 SV=1[more]
A0A067L874_JATCU2.7e-3398.59Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_02272 PE=3 SV=1[more]
B9RTF4_RICCO2.7e-3398.59Auxin-responsive protein OS=Ricinus communis GN=RCOM_0909070 PE=3 SV=1[more]
A0A059B489_EUCGR2.7e-3398.59Auxin-responsive protein OS=Eucalyptus grandis GN=EUGRSUZ_H03170 PE=3 SV=1[more]
M5XGE5_PRUPE2.7e-3398.59Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010698mg PE=3 SV=1[more]
BLAST of CmaCh00G005010 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04730.16.4e-3490.14 indoleacetic acid-induced protein 16[more]
AT3G23050.11.4e-3391.67 indole-3-acetic acid 7[more]
AT4G14550.12.4e-3391.55 indole-3-acetic acid inducible 14[more]
AT1G04250.12.1e-3285.92 AUX/IAA transcriptional regulator family protein[more]
AT4G29080.13.4e-2778.26 phytochrome-associated protein 2[more]
BLAST of CmaCh00G005010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432618|ref|XP_004134096.1|1.8e-33100.00PREDICTED: auxin-responsive protein IAA14 [Cucumis sativus][more]
gi|659076266|ref|XP_008438588.1|1.8e-33100.00PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo][more]
gi|802581515|ref|XP_012069759.1|3.9e-3398.59PREDICTED: auxin-responsive protein IAA14-like [Jatropha curcas][more]
gi|255551957|ref|XP_002517023.1|3.9e-3398.59PREDICTED: auxin-responsive protein IAA7 [Ricinus communis][more]
gi|596208164|ref|XP_007223810.1|3.9e-3398.59hypothetical protein PRUPE_ppa010698mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G005010.1CmaCh00G005010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 1..53
score: 15
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 3..67
score: 4.6
NoneNo IPR availablePANTHERPTHR31734:SF30AUXIN-RESPONSIVE PROTEIN IAA14-RELATEDcoord: 3..67
score: 4.6
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 14..52
score: 2.45

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh00G005010CmoCh06G009490Cucurbita moschata (Rifu)cmacmoB017
CmaCh00G005010Lsi05G016640Bottle gourd (USVL1VR-Ls)cmalsiB010
CmaCh00G005010Cp4.1LG08g03670Cucurbita pepo (Zucchini)cmacpeB019
CmaCh00G005010MELO3C006476.2Melon (DHL92) v3.6.1cmamedB002
CmaCh00G005010CsaV3_3G012650Cucumber (Chinese Long) v3cmacucB0002
CmaCh00G005010Cla97C05G085700Watermelon (97103) v2cmawmbB002
CmaCh00G005010CsGy3G012680Cucumber (Gy14) v2cgybcmaB275
CmaCh00G005010Carg16591Silver-seed gourdcarcmaB0323
CmaCh00G005010Carg06192Silver-seed gourdcarcmaB1318
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh00G005010CmaCh06G009160Cucurbita maxima (Rimu)cmacmaB027
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G005010Cucurbita maxima (Rimu)cmacmaB003
CmaCh00G005010Cucurbita maxima (Rimu)cmacmaB015
CmaCh00G005010Cucurbita moschata (Rifu)cmacmoB012