BLAST of Cla97C11G220360 vs. NCBI nr
Match:
XP_008466190.1 (PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Cucumis melo])
HSP 1 Score: 543.9 bits (1400), Expect = 3.5e-151
Identity = 281/301 (93.36%), Postives = 288/301 (95.68%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MA VRLPCSSSSS LRSKQHH IFLA LSC QNPSYPINGDFNLS+SRSSPSLLSTSI H
Sbjct: 1 MASVRLPCSSSSSILRSKQHHHIFLAPLSCSQNPSYPINGDFNLSVSRSSPSLLSTSICH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
NPLISI AK+TSKF+FQFASTSQDEAV+SSPSD EEFSRTRLLAQNVPW+STPEDIRSLF
Sbjct: 61 NPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDIEEFSRTRLLAQNVPWDSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE
Sbjct: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV
Sbjct: 181 KPSPPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFK KKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEEKSQSED STDGVELANA AE
Sbjct: 241 AFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKSQSEDASTDGVELANAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 301
BLAST of Cla97C11G220360 vs. NCBI nr
Match:
XP_004136268.1 (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KGN60238.1 hypothetical protein Csa_3G889940 [Cucumis sativus])
HSP 1 Score: 533.9 bits (1374), Expect = 3.6e-148
Identity = 278/301 (92.36%), Postives = 288/301 (95.68%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MA VRLPCSSSSS LRSK HH IFLA LSC QNPSYPINGDFNLSISRSSPSLLSTSISH
Sbjct: 1 MASVRLPCSSSSSILRSKHHHQIFLAPLSCSQNPSYPINGDFNLSISRSSPSLLSTSISH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
+PLISIRAK+TS F+FQFASTSQDEAV SSPSDTEEFS+TRLLAQNVPW+STPEDIRSLF
Sbjct: 61 SPLISIRAKRTSTFVFQFASTSQDEAV-SSPSDTEEFSQTRLLAQNVPWDSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE
Sbjct: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKPKPVTFNLFVANLPF+ARAKDL+EFFDSGSGNVVSAQIIF+ENPRRSSGYGFV
Sbjct: 181 KPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFKTKKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEEK QSED STDGVELANA AE
Sbjct: 241 AFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKPQSEDASTDGVELANAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 300
BLAST of Cla97C11G220360 vs. NCBI nr
Match:
XP_023535968.1 (28 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 506.9 bits (1304), Expect = 4.7e-140
Identity = 260/301 (86.38%), Postives = 278/301 (92.36%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MALVRLPCSSSS FLRS Q +L+F++ LSCPQNPSY NGD LS+SRSS SL ST + H
Sbjct: 1 MALVRLPCSSSSLFLRSNQQNLVFISPLSCPQNPSYSNNGDIKLSLSRSSSSLFSTPLGH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
NPL SIRAK+T KF+FQ ASTSQD+AVASS SD EEFSR RLLAQNVPWNSTPEDIRSLF
Sbjct: 61 NPLTSIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRNRLLAQNVPWNSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKE
Sbjct: 121 EKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKP PVTFNLFVANLPF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV
Sbjct: 181 KPSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFKTKKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEEKSQSEDTST+GVELA+A AE
Sbjct: 241 AFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTEGVELASAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 301
BLAST of Cla97C11G220360 vs. NCBI nr
Match:
XP_022937168.1 (28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 506.5 bits (1303), Expect = 6.1e-140
Identity = 260/301 (86.38%), Postives = 278/301 (92.36%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MALVRLPCSSSS FLRS Q +L+F++ LSCPQNPSY NGD LS+SRSS SL ST + H
Sbjct: 1 MALVRLPCSSSSLFLRSNQQNLVFISPLSCPQNPSYSNNGDIKLSLSRSSSSLFSTPLGH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
NPL SIRAK+T KF+FQ ASTSQD+AVASS SD EEFSR RLLAQNVPW+STPEDIRSLF
Sbjct: 61 NPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRNRLLAQNVPWDSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKE
Sbjct: 121 EKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKP PVTFNLFVANLPF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV
Sbjct: 181 KPSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFKTKKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEEKSQSEDTSTDGVELA+A AE
Sbjct: 241 AFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 301
BLAST of Cla97C11G220360 vs. NCBI nr
Match:
XP_022975867.1 (28 kDa ribonucleoprotein, chloroplastic [Cucurbita maxima])
HSP 1 Score: 500.0 bits (1286), Expect = 5.7e-138
Identity = 257/301 (85.38%), Postives = 276/301 (91.69%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MALVRLPCSSS FLRS Q +L+F+A LSC QNPSY NGD LS+SRSS SL ST + H
Sbjct: 1 MALVRLPCSSSFLFLRSNQQNLVFIAPLSCLQNPSYSNNGDIKLSLSRSSSSLFSTPLGH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
NPL SIRAK+T KF+FQ ASTSQD+A+ASS SD EEFSRTRLLAQNVPW+STPEDIRSLF
Sbjct: 61 NPLTSIRAKRTRKFVFQLASTSQDDAIASSSSDAEEFSRTRLLAQNVPWDSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKE
Sbjct: 121 EKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKP PVTFNLFVANLPF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV
Sbjct: 181 KPSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFKTKKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEE SQS+DTSTDGVELA+A AE
Sbjct: 241 AFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEENSQSDDTSTDGVELASAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 301
BLAST of Cla97C11G220360 vs. TrEMBL
Match:
tr|A0A1S3CS17|A0A1S3CS17_CUCME (31 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503681 PE=4 SV=1)
HSP 1 Score: 543.9 bits (1400), Expect = 2.3e-151
Identity = 281/301 (93.36%), Postives = 288/301 (95.68%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MA VRLPCSSSSS LRSKQHH IFLA LSC QNPSYPINGDFNLS+SRSSPSLLSTSI H
Sbjct: 1 MASVRLPCSSSSSILRSKQHHHIFLAPLSCSQNPSYPINGDFNLSVSRSSPSLLSTSICH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
NPLISI AK+TSKF+FQFASTSQDEAV+SSPSD EEFSRTRLLAQNVPW+STPEDIRSLF
Sbjct: 61 NPLISIMAKRTSKFVFQFASTSQDEAVSSSPSDIEEFSRTRLLAQNVPWDSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE
Sbjct: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV
Sbjct: 181 KPSPPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFK KKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEEKSQSED STDGVELANA AE
Sbjct: 241 AFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKSQSEDASTDGVELANAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 301
BLAST of Cla97C11G220360 vs. TrEMBL
Match:
tr|A0A0A0LEN0|A0A0A0LEN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889940 PE=4 SV=1)
HSP 1 Score: 533.9 bits (1374), Expect = 2.4e-148
Identity = 278/301 (92.36%), Postives = 288/301 (95.68%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNPSYPINGDFNLSISRSSPSLLSTSISH 60
MA VRLPCSSSSS LRSK HH IFLA LSC QNPSYPINGDFNLSISRSSPSLLSTSISH
Sbjct: 1 MASVRLPCSSSSSILRSKHHHQIFLAPLSCSQNPSYPINGDFNLSISRSSPSLLSTSISH 60
Query: 61 NPLISIRAKKTSKFIFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLF 120
+PLISIRAK+TS F+FQFASTSQDEAV SSPSDTEEFS+TRLLAQNVPW+STPEDIRSLF
Sbjct: 61 SPLISIRAKRTSTFVFQFASTSQDEAV-SSPSDTEEFSQTRLLAQNVPWDSTPEDIRSLF 120
Query: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE
Sbjct: 121 EKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKE 180
Query: 181 KPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFV 240
KPS PVKPKPVTFNLFVANLPF+ARAKDL+EFFDSGSGNVVSAQIIF+ENPRRSSGYGFV
Sbjct: 181 KPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSGYGFV 240
Query: 241 AFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKSQSEDTSTDGVELANATAE 300
AFKTKKDAEAAISEFQGK FMGR+LR+ARSKQFVKLPSEEK QSED STDGVELANA AE
Sbjct: 241 AFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKPQSEDASTDGVELANAAAE 300
Query: 301 V 302
V
Sbjct: 301 V 300
BLAST of Cla97C11G220360 vs. TrEMBL
Match:
tr|A0A2P5BLR3|A0A2P5BLR3_PARAD (Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_227850 PE=4 SV=1)
HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 177/308 (57.47%), Postives = 229/308 (74.35%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNP-SYPINGDFNLSISRSSPSLLSTSIS 60
MAL+RLP S ++F ++H P P S+PIN ++S+S S PSLL S +
Sbjct: 1 MALLRLPSSPYTTFFPIERH----------PFTPLSFPINSAHSISVSCSLPSLLPLSHT 60
Query: 61 HNPLISIRAKK--TSKFIFQFASTSQDEAV-ASSP-------------SDTEEFSRTRLL 120
++ + + K ++ F+ F+ST+Q++A+ SSP SD+EE + RL
Sbjct: 61 NSRRLPVNKTKRDSANFLLHFSSTAQEQALDFSSPVSVSSEAGEFESDSDSEEVLKDRLY 120
Query: 121 AQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESY 180
AQNVPWN+TPEDI +LFEKYGTV+DVELSMYNK RNRGLAFVTMGSPEEAL ALNNL+SY
Sbjct: 121 AQNVPWNATPEDICALFEKYGTVVDVELSMYNKTRNRGLAFVTMGSPEEALTALNNLQSY 180
Query: 181 EFEGRTLRLNYAKLKKEKPSSPVKPKP-VTFNLFVANLPFEARAKDLREFFDSGSGNVVS 240
E EGR ++++YA+ +K+K ++PV+PKP VTFNLFVANL +EARAKDLREFF+S +VVS
Sbjct: 181 ELEGRIIKIDYARPRKKKVATPVQPKPEVTFNLFVANLSYEARAKDLREFFNSEGHSVVS 240
Query: 241 AQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKS 291
A++IFHENPRRS GYGFV+FKTKK+AE A+S QGKIFMGR +R+ARSKQFVK P E +
Sbjct: 241 AEVIFHENPRRSLGYGFVSFKTKKEAETALSAIQGKIFMGRPIRVARSKQFVKQPITESA 298
BLAST of Cla97C11G220360 vs. TrEMBL
Match:
tr|A0A2I4GQJ7|A0A2I4GQJ7_9ROSI (28 kDa ribonucleoprotein, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109009951 PE=4 SV=1)
HSP 1 Score: 314.7 bits (805), Expect = 2.3e-82
Identity = 164/259 (63.32%), Postives = 207/259 (79.92%), Query Frame = 0
Query: 42 FNLSISRSSPSLLSTSISHNPLISIRAKKTSKFIFQFASTSQDEAV--------ASSPSD 101
+NL S + L S +H +S +AK+ F+ F+ST+Q++A+ S P+
Sbjct: 32 YNLPFSCALSPLSHPSPAHTHTLSAKAKRVRNFVLYFSSTAQEQALDSVSAQSDDSEPAP 91
Query: 102 TEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEA 161
TEEFSRTRL+AQNVPW T EDIR+LFEK+GTVLDVELSM+NK +NRGLAFVTMGSPEEA
Sbjct: 92 TEEFSRTRLIAQNVPWTCTVEDIRALFEKHGTVLDVELSMHNKTKNRGLAFVTMGSPEEA 151
Query: 162 LAALNNLESYEFEGRTLRLNYAKLKKEK--PSSPVKPKPVTFNLFVANLPFEARAKDLRE 221
ALNNL SYE EGRT+++NYAK +K++ PS PV+P PVTFNLFVANLPFEAR+KDLRE
Sbjct: 152 RMALNNLVSYELEGRTIKVNYAKARKKRPSPSPPVQPNPVTFNLFVANLPFEARSKDLRE 211
Query: 222 FFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRIARSK 281
FF SGSG+VVSAQ+IFH++PR+SSGYGFVAFK+KKDA+ A+ FQGK+FMGR +R+ARS+
Sbjct: 212 FF-SGSGDVVSAQVIFHDSPRKSSGYGFVAFKSKKDADEALPAFQGKMFMGRPIRVARSR 271
Query: 282 QFVKLPSEEKSQSEDTSTD 291
Q+VKL +EE ++S DTS +
Sbjct: 272 QYVKLRAEEGAESVDTSIE 289
BLAST of Cla97C11G220360 vs. TrEMBL
Match:
tr|A0A2P5F1H4|A0A2P5F1H4_9ROSA (Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_126770 PE=4 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 2.9e-82
Identity = 176/308 (57.14%), Postives = 226/308 (73.38%), Query Frame = 0
Query: 1 MALVRLPCSSSSSFLRSKQHHLIFLARLSCPQNP-SYPINGDFNLSISRSSPSL--LSTS 60
MAL+R S S++FL ++H P P S+P N ++S+S S PSL LS +
Sbjct: 1 MALLRFLSSPSTTFLPIERH----------PFTPLSFPNNSPHSISVSCSLPSLFPLSHT 60
Query: 61 ISHNPLISIRAKKTSKFIFQFASTSQDEAVAS--------------SPSDTEEFSRTRLL 120
S +S + ++ F+ F+ST+Q++A+ S S SD+EE + RL
Sbjct: 61 KSRRLPVSRTKRDSANFLLHFSSTTQEQALDSSSPVSISSEAGEFESDSDSEEVLKDRLY 120
Query: 121 AQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESY 180
AQNVPWN+T EDIR+LFEKYGTV+DVELSMYNK RNRGLAFVTMGSPEEAL ALNNL+SY
Sbjct: 121 AQNVPWNATTEDIRALFEKYGTVVDVELSMYNKTRNRGLAFVTMGSPEEALTALNNLQSY 180
Query: 181 EFEGRTLRLNYAKLKKEKPSSPVKPKP-VTFNLFVANLPFEARAKDLREFFDSGSGNVVS 240
E EGR ++++YA+ +K+K ++PV+PKP VTFNLFVANL +EARAKDLREFF+S +VVS
Sbjct: 181 ELEGRIIKIDYARPRKKKVATPVQPKPEVTFNLFVANLSYEARAKDLREFFNSEGHSVVS 240
Query: 241 AQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVKLPSEEKS 291
A++IFHENPRRS GYGFV+FK+KK+AE A+S QGKIFMGR +R+ARSKQFVK P E +
Sbjct: 241 AEVIFHENPRRSLGYGFVSFKSKKEAETALSAIQGKIFMGRPIRVARSKQFVKQPITESA 298
BLAST of Cla97C11G220360 vs. Swiss-Prot
Match:
sp|Q39061|CP33_ARATH (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 2.3e-21
Identity = 67/215 (31.16%), Postives = 122/215 (56.74%), Query Frame = 0
Query: 101 RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALN 160
RL N+P+ T ++ +F + GTV+DV++ +Y+K+ R+RG FVTMGS EEA A+
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQI-VYDKVTDRSRGFGFVTMGSIEEAKEAMQ 176
Query: 161 NLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFN---------LFVANLPFEARAKDL 220
S + GRT+++N+ ++ + + ++ K N ++ NL + ++ L
Sbjct: 177 MFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGL 236
Query: 221 REFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRI-- 280
++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GRALR+
Sbjct: 237 KDAFGDQPG-VLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNL 296
Query: 281 --ARSKQFVKLPSEEKSQSEDTSTDGVE-LANATA 300
R K V PS E+ ++E+ S + E L+N +A
Sbjct: 297 ASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329
BLAST of Cla97C11G220360 vs. Swiss-Prot
Match:
sp|P19682|ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18
Identity = 65/239 (27.20%), Postives = 119/239 (49.79%), Query Frame = 0
Query: 44 LSISRSSPSLLS---TSISHNPLISIRAKKTSKFIFQFASTSQD-EAVASSPSDTEEFSR 103
+S+S S P+LLS + +S+ ++ + + D + +TEE+
Sbjct: 33 ISLSSSLPTLLSLNKRTTQFPTFVSVLSEDDNTLVLDDQEQGGDFPSFVGEAGETEEYQE 92
Query: 104 ----TRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRGLAFVTMGSPEEA 163
+L N+P++ E + LF++ G V+++ +YN+ R+RG FVTM + EEA
Sbjct: 93 PSEDAKLFVGNLPYDIDSEGLAQLFQQAG-VVEIAEVIYNRETDRSRGFGFVTMSTVEEA 152
Query: 164 LAALNNLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFNLFVANLPFEARAKDLREFF 223
A+ Y+ GR L +N A + +P + T+ ++V N+P++ L + F
Sbjct: 153 DKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVF 212
Query: 224 DSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRIARSKQ 273
S G VVSA+++F RS G+GFV ++ + AI+ G+ GR +R+ +++
Sbjct: 213 -SEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEE 269
BLAST of Cla97C11G220360 vs. Swiss-Prot
Match:
sp|P19683|ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 4.0e-18
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 0
Query: 101 RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRGLAFVTMGSPEEALAALN 160
+L N+P++ E + LFE+ G V+++ +YN+ ++RG FVTM + EEA A+
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAG-VVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 196
Query: 161 NLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFNLFVANLPFEARAKDLREFFDSGSG 220
Y+ GR L +N A + E+P P + ++ ++V N+P+ L + F S G
Sbjct: 197 MYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLF-SEHG 256
Query: 221 NVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRI 268
VVSA++++ RS G+GFV ++ + AI+ G+ GR +R+
Sbjct: 257 KVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRV 303
BLAST of Cla97C11G220360 vs. Swiss-Prot
Match:
sp|Q04836|CP31A_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 3.4e-17
Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 0
Query: 91 PSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRGLAFVTMG 150
P +EE +L N+ ++ + + LFE+ GTV E+ +YN+ ++RG FVTM
Sbjct: 144 PEPSEE---AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEV-IYNRETDQSRGFGFVTMS 203
Query: 151 SPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFNLFVANLPFEARAKD 210
S +EA A+ Y+ GR L +N A + +P + F ++V NLP++
Sbjct: 204 SVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGR 263
Query: 211 LREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRI 268
L + F S G VV A++++ RS G+GFV + AIS G+ GRA+R+
Sbjct: 264 LEQLF-SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 317
BLAST of Cla97C11G220360 vs. Swiss-Prot
Match:
sp|P28644|ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 5.8e-17
Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 0
Query: 82 SQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRN 141
S + V +E +L N+P++ E + +F+ G V+++ +YN+ R+
Sbjct: 37 SDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAG-VVEIAEVIYNRETDRS 96
Query: 142 RGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFNLFVAN 201
RG FVTM + EEA A+ L Y+ +GR L +N A + +P + ++V N
Sbjct: 97 RGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGN 156
Query: 202 LPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKI 261
LP++ L + F S G VVSA+++ RS G+GFV ++ + AI+ G+
Sbjct: 157 LPWDVDTSRLEQLF-SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQT 216
Query: 262 FMGRALRI 268
GRA+R+
Sbjct: 217 LDGRAVRV 222
BLAST of Cla97C11G220360 vs. TAIR10
Match:
AT4G09040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69
Identity = 132/202 (65.35%), Postives = 165/202 (81.68%), Query Frame = 0
Query: 98 SRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 157
S+TRL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M SPEEA AL
Sbjct: 92 SKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATAL 151
Query: 158 NNLESYEFEGRTLRLNYAKLKKEKPSSPVK-PKPV-TFNLFVANLPFEARAKDLREFFDS 217
+LES E+EGR L+++YAK KK+K +P + P PV TFNLFVANL FEARAK L+EFFD+
Sbjct: 152 KSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDA 211
Query: 218 GSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRIARSKQFVK 277
+GNVVS ++IFHENPRRSSGYGFV+FKTKK AEAA+ EFQGK F+GR +R+A+SKQFVK
Sbjct: 212 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVK 271
Query: 278 L-------PSEEKSQSEDTSTD 291
L P EE+++ E + ++
Sbjct: 272 LQAKEGLQPPEEEAEEEPSQSE 293
BLAST of Cla97C11G220360 vs. TAIR10
Match:
AT2G35410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 131.7 bits (330), Expect = 7.4e-31
Identity = 75/194 (38.66%), Postives = 114/194 (58.76%), Query Frame = 0
Query: 99 RTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALN 158
+ +L N+PW+ + DI LF + GTV +VE+ +NRG AFVTM S EEA AA++
Sbjct: 94 KRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAID 153
Query: 159 NLESYEFEGRTLRLNYA-KLKKEKPSSP-----VKPKPVTFNLFVANLPFEARAKDLREF 218
++++ GR + +++A + KK P SP P L+V+NL ++AR+ LRE
Sbjct: 154 KFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLREL 213
Query: 219 FDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRIARSKQ 278
F + N VSA+++F + RSSGYGFV+F T+++AE AI++ GK MGR + +
Sbjct: 214 FTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPITL----- 273
Query: 279 FVKLPSEEKSQSED 287
K S+SED
Sbjct: 274 --KFSLRSASESED 280
BLAST of Cla97C11G220360 vs. TAIR10
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33)
HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 67/215 (31.16%), Postives = 122/215 (56.74%), Query Frame = 0
Query: 101 RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALN 160
RL N+P+ T ++ +F + GTV+DV++ +Y+K+ R+RG FVTMGS EEA A+
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQI-VYDKVTDRSRGFGFVTMGSIEEAKEAMQ 176
Query: 161 NLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFN---------LFVANLPFEARAKDL 220
S + GRT+++N+ ++ + + ++ K N ++ NL + ++ L
Sbjct: 177 MFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGL 236
Query: 221 REFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRI-- 280
++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GRALR+
Sbjct: 237 KDAFGDQPG-VLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNL 296
Query: 281 --ARSKQFVKLPSEEKSQSEDTSTDGVE-LANATA 300
R K V PS E+ ++E+ S + E L+N +A
Sbjct: 297 ASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA 329
BLAST of Cla97C11G220360 vs. TAIR10
Match:
AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 91.7 bits (226), Expect = 8.5e-19
Identity = 61/190 (32.11%), Postives = 100/190 (52.63%), Query Frame = 0
Query: 88 ASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFV 147
AS+ D T+L N+P+N + + + + VE+ +YN+ ++RG AFV
Sbjct: 73 ASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEV-LYNRDTGQSRGFAFV 132
Query: 148 TMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFNLFVANLPFEAR 207
TM + E+ ++NL+ E+ GR L++N+A K KP+ LFV NL +
Sbjct: 133 TMSNVEDCNIIIDNLDGTEYLGRALKVNFA--DKPKPNKEPLYPETEHKLFVGNLSWTVT 192
Query: 208 AKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRAL 267
++ L F G+VV A+++F + RS GYGFV + +K + E A+ G GRA+
Sbjct: 193 SESLAGAFRE-CGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAI 252
Query: 268 RI--ARSKQF 274
R+ A+ K+F
Sbjct: 253 RVNLAQGKKF 258
BLAST of Cla97C11G220360 vs. TAIR10
Match:
AT4G24770.1 (31-kDa RNA binding protein)
HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18
Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 0
Query: 91 PSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRGLAFVTMG 150
P +EE +L N+ ++ + + LFE+ GTV E+ +YN+ ++RG FVTM
Sbjct: 144 PEPSEE---AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEV-IYNRETDQSRGFGFVTMS 203
Query: 151 SPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSSPVKPKPVTFNLFVANLPFEARAKD 210
S +EA A+ Y+ GR L +N A + +P + F ++V NLP++
Sbjct: 204 SVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGR 263
Query: 211 LREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRI 268
L + F S G VV A++++ RS G+GFV + AIS G+ GRA+R+
Sbjct: 264 LEQLF-SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 317
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008466190.1 | 3.5e-151 | 93.36 | PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Cucumis melo] | [more] |
| XP_004136268.1 | 3.6e-148 | 92.36 | PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KGN60238.1... | [more] |
| XP_023535968.1 | 4.7e-140 | 86.38 | 28 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp. pepo] | [more] |
| XP_022937168.1 | 6.1e-140 | 86.38 | 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata] | [more] |
| XP_022975867.1 | 5.7e-138 | 85.38 | 28 kDa ribonucleoprotein, chloroplastic [Cucurbita maxima] | [more] |
