Cla97C11G207150 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G207150
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr11 : 1037771 .. 1038394 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGAACCAAGTGAAAGCATCCAAATGAAATTTACTTGTAACTTTTCTATGGTTTATTGTTTGCAGATGGATGTGGAGAAATGGCTTCAGCATTTAACTGCTGCAAGAAGCAAAGCAGAGCAGGAGACTACTTTTGAAGAAGTGGATGGCTTGATCAATCAATTAAATTTGCTCTCTAATGCTTTAAGCATGAGGTAGCCAACTTTGTACATTCTCTTCATAATAAGCCTTAACTTAATATCCATCCGCTTCTATCATCGCTTATCGATGCTAACGTTCAGCTGTCAAATGAATTTTACATCAGTGAGACTGAGGAAAATGTAACTCAAGCGATATCGATTTCAAAGAGTTTATATTCGAGGAGGATGGAGTTGGAGCCTATGTTTACTAAACTACTGAATGATGATCCTAAAACGGAAGTTGGTCAGATGTCGGGTATCAAGAATACCGAAGATGACGAGAATGTGAATCAAGATTGTAACGACAGCAGCCCTGAAGAATGTAGAGGAGTGGAGGCTGTGAAAGCTGAACCTGTTCTGTCCCAAGCAATGGATAAGAAAGGGAAAGCGAAAGGGAAAAATAAGCCCAGGAAAAACAGGAAGGGTCGTAAAATTAATTGA

mRNA sequence

ATGATGGATGTGGAGAAATGGCTTCAGCATTTAACTGCTGCAAGAAGCAAAGCAGAGCAGGAGACTACTTTTGAAGAAGTGGATGGCTTGATCAATCAATTAAATTTGCTCTCTAATGCTTTAAGCATGAGTGAGACTGAGGAAAATGTAACTCAAGCGATATCGATTTCAAAGAGTTTATATTCGAGGAGGATGGAGTTGGAGCCTATGTTTACTAAACTACTGAATGATGATCCTAAAACGGAAGTTGGTCAGATGTCGGGTATCAAGAATACCGAAGATGACGAGAATGTGAATCAAGATTGTAACGACAGCAGCCCTGAAGAATGTAGAGGAGTGGAGGCTGTGAAAGCTGAACCTGTTCTGTCCCAAGCAATGGATAAGAAAGGGAAAGCGAAAGGGAAAAATAAGCCCAGGAAAAACAGGAAGGGTCGTAAAATTAATTGA

Coding sequence (CDS)

ATGATGGATGTGGAGAAATGGCTTCAGCATTTAACTGCTGCAAGAAGCAAAGCAGAGCAGGAGACTACTTTTGAAGAAGTGGATGGCTTGATCAATCAATTAAATTTGCTCTCTAATGCTTTAAGCATGAGTGAGACTGAGGAAAATGTAACTCAAGCGATATCGATTTCAAAGAGTTTATATTCGAGGAGGATGGAGTTGGAGCCTATGTTTACTAAACTACTGAATGATGATCCTAAAACGGAAGTTGGTCAGATGTCGGGTATCAAGAATACCGAAGATGACGAGAATGTGAATCAAGATTGTAACGACAGCAGCCCTGAAGAATGTAGAGGAGTGGAGGCTGTGAAAGCTGAACCTGTTCTGTCCCAAGCAATGGATAAGAAAGGGAAAGCGAAAGGGAAAAATAAGCCCAGGAAAAACAGGAAGGGTCGTAAAATTAATTGA

Protein sequence

MMDVEKWLQHLTAARSKAEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSLYSRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRGVEAVKAEPVLSQAMDKKGKAKGKNKPRKNRKGRKIN

Homology

[Close]

BLAST of Cla97C11G207150 vs. NCBI nr
Match: XP_008460225.1 (PREDICTED: uncharacterized protein LOC103499108 [Cucumis melo] >XP_016902516.1 PREDICTED: uncharacterized protein LOC103499108 [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSKAEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSLY 61
            MDV+KWLQHLTAA+S  E+E   E+VDGL+N+L+LLS ALSMS+ EENVTQ ISISKSLY
Sbjct: 2660 MDVDKWLQHLTAAKSMGEKEIPLEKVDGLLNELDLLSTALSMSKPEENVTQVISISKSLY 2719

Query: 62   SRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRGVEAVKAEPV 121
            SRR ELE +FTKLLNDDP+ EVGQMSGIKN E DE VN DCND SPEECRGVEAVK EPV
Sbjct: 2720 SRRTELESIFTKLLNDDPEMEVGQMSGIKNAEGDEIVNPDCNDKSPEECRGVEAVKVEPV 2779

Query: 122  LSQAMDKKGKAKGKNKPRKNRK 144
            L QAM++KGK        K+RK
Sbjct: 2780 LPQAMNQKGKXXXXXXXXKSRK 2801

[Close]

BLAST of Cla97C11G207150 vs. NCBI nr
Match: KGN50803.1 (hypothetical protein Csa_5G266320 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 6.2e-37
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSK-AEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSL 61
            MDV+KW+QHLTAA+SK AE+E   E+VDGL+N+L LLS ALSMS+ EEN T+ ISISKSL
Sbjct: 1460 MDVDKWVQHLTAAKSKAAEKEVPLEKVDGLLNELCLLSTALSMSKPEENATEVISISKSL 1519

Query: 62   YSRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRGVEAVKA-- 121
            Y RR EL  +F+ LL+DDP+ EVGQMSGIKN E DENVN DCND SPEECR VEAVKA  
Sbjct: 1520 YGRRTELGSIFSNLLSDDPEMEVGQMSGIKNAEGDENVNPDCNDESPEECREVEAVKALK 1579

Query: 122  -EPVLSQ 125
             EPVL Q
Sbjct: 1580 VEPVLPQ 1586

[Close]

BLAST of Cla97C11G207150 vs. NCBI nr
Match: XP_011655089.1 (PREDICTED: uncharacterized protein LOC105435477 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 6.2e-37
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSK-AEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSL 61
            MDV+KW+QHLTAA+SK AE+E   E+VDGL+N+L LLS ALSMS+ EEN T+ ISISKSL
Sbjct: 1463 MDVDKWVQHLTAAKSKAAEKEVPLEKVDGLLNELCLLSTALSMSKPEENATEVISISKSL 1522

Query: 62   YSRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRGVEAVKA-- 121
            Y RR EL  +F+ LL+DDP+ EVGQMSGIKN E DENVN DCND SPEECR VEAVKA  
Sbjct: 1523 YGRRTELGSIFSNLLSDDPEMEVGQMSGIKNAEGDENVNPDCNDESPEECREVEAVKALK 1582

Query: 122  -EPVLSQ 125
             EPVL Q
Sbjct: 1583 VEPVLPQ 1589

[Close]

BLAST of Cla97C11G207150 vs. NCBI nr
Match: XP_022144470.1 (uncharacterized protein LOC111014151 [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 5.1e-23
Identity = 76/177 (42.94%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSKAEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSLY 61
            ++VEKW  HL+AARS AE+    + VD L+N+LNLLS ALSMSE ++N+++  SISKSLY
Sbjct: 2483 INVEKWHHHLSAARSNAEEGIPLDVVDRLLNELNLLSTALSMSEPKQNISRVASISKSLY 2542

Query: 62   SRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRG--------- 121
            SRR+ELEP+  KL+ DDP TE+G MSG +N ED ++  +    SSP E  G         
Sbjct: 2543 SRRIELEPILAKLVRDDPVTELGDMSGFENAEDSKHGEEVSKGSSPVEGGGLEEPVEPXX 2602

Query: 122  -----------------------------VEAVKAEPVLSQAMDKKGKAKGKNKPRK 141
                                         V+ V+ E V+SQA DKKGK K K K ++
Sbjct: 2603 XXXXXXXXXXXXXXXXXXXXXXXXXGLEPVQPVEVETVVSQATDKKGKVKKKAKEKQ 2659

[Close]

BLAST of Cla97C11G207150 vs. NCBI nr
Match: XP_022942070.1 (uncharacterized protein LOC111447259 isoform X1 [Cucurbita moschata] >XP_022942071.1 uncharacterized protein LOC111447259 isoform X2 [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 4.1e-20
Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSKAEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSLY 61
            MDVE+W++HL+AARSKA++E  FE VDGL+ +LNLLS ALSMS+ +ENV+Q +SISKS+Y
Sbjct: 2637 MDVERWVKHLSAARSKADEEIRFEVVDGLVVELNLLSTALSMSDPKENVSQVVSISKSVY 2696

Query: 62   SRRMELEPMFTK----LLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPE 109
            SRRMELEP+ ++    LL+DDP+ EV Q S      DD    QDC     E
Sbjct: 2697 SRRMELEPILSELLLLLLHDDPEVEVDQRS-----IDD----QDCEGGKAE 2738

[Close]

BLAST of Cla97C11G207150 vs. TrEMBL
Match: tr|A0A1S3CD94|A0A1S3CD94_CUCME (uncharacterized protein LOC103499108 OS=Cucumis melo OX=3656 GN=LOC103499108 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.0e-45
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSKAEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSLY 61
            MDV+KWLQHLTAA+S  E+E   E+VDGL+N+L+LLS ALSMS+ EENVTQ ISISKSLY
Sbjct: 2660 MDVDKWLQHLTAAKSMGEKEIPLEKVDGLLNELDLLSTALSMSKPEENVTQVISISKSLY 2719

Query: 62   SRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRGVEAVKAEPV 121
            SRR ELE +FTKLLNDDP+ EVGQMSGIKN E DE VN DCND SPEECRGVEAVK EPV
Sbjct: 2720 SRRTELESIFTKLLNDDPEMEVGQMSGIKNAEGDEIVNPDCNDKSPEECRGVEAVKVEPV 2779

Query: 122  LSQAMDKKGKAKGKNKPRKNRK 144
            L QAM++KGK        K+RK
Sbjct: 2780 LPQAMNQKGKXXXXXXXXKSRK 2801

[Close]

BLAST of Cla97C11G207150 vs. TrEMBL
Match: tr|A0A0A0KMH5|A0A0A0KMH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G266320 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.1e-37
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 0


Query: 2    MDVEKWLQHLTAARSK-AEQETTFEEVDGLINQLNLLSNALSMSETEENVTQAISISKSL 61
            MDV+KW+QHLTAA+SK AE+E   E+VDGL+N+L LLS ALSMS+ EEN T+ ISISKSL
Sbjct: 1460 MDVDKWVQHLTAAKSKAAEKEVPLEKVDGLLNELCLLSTALSMSKPEENATEVISISKSL 1519

Query: 62   YSRRMELEPMFTKLLNDDPKTEVGQMSGIKNTEDDENVNQDCNDSSPEECRGVEAVKA-- 121
            Y RR EL  +F+ LL+DDP+ EVGQMSGIKN E DENVN DCND SPEECR VEAVKA  
Sbjct: 1520 YGRRTELGSIFSNLLSDDPEMEVGQMSGIKNAEGDENVNPDCNDESPEECREVEAVKALK 1579

Query: 122  -EPVLSQ 125
             EPVL Q
Sbjct: 1580 VEPVLPQ 1586

The following BLAST results are available for this feature:

BLAST of Cla97C11G207150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460225.1	1.1e-44	72.54	PREDICTED: uncharacterized protein LOC103499108 [Cucumis melo] >XP_016902516.1 P...	[more]
KGN50803.1	6.2e-37	70.87	hypothetical protein Csa_5G266320 [Cucumis sativus]	[more]
XP_011655089.1	6.2e-37	70.87	PREDICTED: uncharacterized protein LOC105435477 [Cucumis sativus]	[more]
XP_022144470.1	5.1e-23	42.94	uncharacterized protein LOC111014151 [Momordica charantia]	[more]
XP_022942070.1	4.1e-20	56.76	uncharacterized protein LOC111447259 isoform X1 [Cucurbita moschata] >XP_0229420...	[more]

BLAST of Cla97C11G207150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CD94\|A0A1S3CD94_CUCME	7.0e-45	72.54	uncharacterized protein LOC103499108 OS=Cucumis melo OX=3656 GN=LOC103499108 PE=...	[more]
tr\|A0A0A0KMH5\|A0A0A0KMH5_CUCSA	4.1e-37	70.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G266320 PE=4 SV=1	[more]

BLAST of Cla97C11G207150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C11G207150 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G207150.1	Cla97C11G207150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..148

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G207150	CmoCh04G000120	Cucurbita moschata (Rifu)	cmowmbB703

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C11G207150	Silver-seed gourd	carwmbB0690
Cla97C11G207150	Silver-seed gourd	carwmbB0771
Cla97C11G207150	Cucumber (Gy14) v2	cgybwmbB342
Cla97C11G207150	Cucumber (Gy14) v1	cgywmbB482
Cla97C11G207150	Cucurbita maxima (Rimu)	cmawmbB730
Cla97C11G207150	Cucurbita maxima (Rimu)	cmawmbB732
Cla97C11G207150	Cucurbita moschata (Rifu)	cmowmbB704
Cla97C11G207150	Wild cucumber (PI 183967)	cpiwmbB378
Cla97C11G207150	Cucumber (Chinese Long) v3	cucwmbB375
Cla97C11G207150	Cucumber (Chinese Long) v3	cucwmbB376
Cla97C11G207150	Cucumber (Chinese Long) v2	cuwmbB362
Cla97C11G207150	Bottle gourd (USVL1VR-Ls)	lsiwmbB079
Cla97C11G207150	Melon (DHL92) v3.6.1	medwmbB044
Cla97C11G207150	Melon (DHL92) v3.5.1	mewmbB048
Cla97C11G207150	Watermelon (Charleston Gray)	wcgwmbB065
Cla97C11G207150	Watermelon (Charleston Gray)	wcgwmbB066
Cla97C11G207150	Watermelon (97103) v1	wmwmbB361
Cla97C11G207150	Watermelon (97103) v1	wmwmbB366