Cla97C09G184500 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C09G184500
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	zinc finger CCCH domain-containing protein 19-like
Location	Cla97Chr09 : 37660386 .. 37661086 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAGCTTTTAGATGACACAAATCAAGGAGAAACTGTATTTAGTTCAAACCCAAATGGTGATATTTATATCGCAGAAAACCCAACTACAGTTTTGATGTCCAACGTAAAAGAATTTGCAGGTTTGTCTGTCTTTAGGTTAATCTAATCGTATTGTACATACTATTTGTAGTTTCTCTCAAGTCCTTATAATATAGTTAAAGTTACTTTGCATCTTTCCTATTGTTTCAACAAGAAGAATTTCAAGACCAAAGTTTGTTTTACTGATCAATGGCATGTGAACTGATTACTTTCTTTTATGATATTGTTGCAGAATCTAGACAGAGTGTTCTTGGTGAAGAACAGCCCCCACAGCCAGTAGAATCTACGTATAATAGCTTTAAAGAGACAGAACCTATAAATGTTATGGATAAAGGCTGTCAAGCGAATGAGCAGATTAAAGGATCTAGAGTGATAAATTTGAGCGACGATGATGAAACACCAAGGGCTGAAGAGCATGATTGGAATAACATACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGACGTTCAAGGGCCCTTTTGTCTTGCGTCATTGAAAAACTGGAAGGATGCTAACTATTTTCCTTCAGATTTCAAGGTCTGGAAGACGGGGCAGACTCGAGATCAGGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATAA

mRNA sequence

ATGAGGGAGCTTTTAGATGACACAAATCAAGGAGAAACTGTATTTAGTTCAAACCCAAATGGTGATATTTATATCGCAGAAAACCCAACTACAGTTTTGATGTCCAACGTAAAAGAATTTGCAGAATCTAGACAGAGTGTTCTTGGTGAAGAACAGCCCCCACAGCCAGTAGAATCTACGTATAATAGCTTTAAAGAGACAGAACCTATAAATGTTATGGATAAAGGCTGTCAAGCGAATGAGCAGATTAAAGGATCTAGAGTGATAAATTTGAGCGACGATGATGAAACACCAAGGGCTGAAGAGCATGATTGGAATAACATACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGACGTTCAAGGGCCCTTTTGTCTTGCGTCATTGAAAAACTGGAAGGATGCTAACTATTTTCCTTCAGATTTCAAGGTCTGGAAGACGGGGCAGACTCGAGATCAGGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATAA

Coding sequence (CDS)

ATGAGGGAGCTTTTAGATGACACAAATCAAGGAGAAACTGTATTTAGTTCAAACCCAAATGGTGATATTTATATCGCAGAAAACCCAACTACAGTTTTGATGTCCAACGTAAAAGAATTTGCAGAATCTAGACAGAGTGTTCTTGGTGAAGAACAGCCCCCACAGCCAGTAGAATCTACGTATAATAGCTTTAAAGAGACAGAACCTATAAATGTTATGGATAAAGGCTGTCAAGCGAATGAGCAGATTAAAGGATCTAGAGTGATAAATTTGAGCGACGATGATGAAACACCAAGGGCTGAAGAGCATGATTGGAATAACATACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGACGTTCAAGGGCCCTTTTGTCTTGCGTCATTGAAAAACTGGAAGGATGCTAACTATTTTCCTTCAGATTTCAAGGTCTGGAAGACGGGGCAGACTCGAGATCAGGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATAA

Protein sequence

MRELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTYNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS

Homology

[Close]

BLAST of Cla97C09G184500 vs. NCBI nr
Match: XP_022969376.1 (uncharacterized protein At5g08430 isoform X2 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 1.4e-69
Identity = 135/167 (80.84%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 2   RELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTY 61
           RE+ DDTNQGETVF SNPN DIY+AEN T   MSNV+EFAE R+SVL EEQPPQPVESTY
Sbjct: 274 REVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRRSVLDEEQPPQPVESTY 333

Query: 62  N-SFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQ 121
           N S  ETE IN +DKG  ANEQIK SRVINLSDDDE PR EE DWN+ LRSLIWYYLDPQ
Sbjct: 334 NSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELDWNSTLRSLIWYYLDPQ 393

Query: 122 GDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPF 168
           GDVQGPFCLASLKNWKDA+YFP DFKVWK GQT+DQAVLLSDILS F
Sbjct: 394 GDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDILSHF 440

[Close]

BLAST of Cla97C09G184500 vs. NCBI nr
Match: XP_022969375.1 (uncharacterized protein At5g08430 isoform X1 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 1.4e-69
Identity = 135/167 (80.84%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 2   RELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTY 61
           RE+ DDTNQGETVF SNPN DIY+AEN T   MSNV+EFAE R+SVL EEQPPQPVESTY
Sbjct: 377 REVSDDTNQGETVFGSNPNVDIYVAENRTAASMSNVEEFAECRRSVLDEEQPPQPVESTY 436

Query: 62  N-SFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQ 121
           N S  ETE IN +DKG  ANEQIK SRVINLSDDDE PR EE DWN+ LRSLIWYYLDPQ
Sbjct: 437 NSSLNETELINEVDKGWLANEQIKESRVINLSDDDELPRGEELDWNSTLRSLIWYYLDPQ 496

Query: 122 GDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPF 168
           GDVQGPFCLASLKNWKDA+YFP DFKVWK GQT+DQAVLLSDILS F
Sbjct: 497 GDVQGPFCLASLKNWKDADYFPPDFKVWKMGQTQDQAVLLSDILSHF 543

[Close]

BLAST of Cla97C09G184500 vs. NCBI nr
Match: XP_004148294.1 (PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 133/169 (78.70%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MRELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVEST 60
           +RE  DD  QGETVFSSN N D Y AENPTT LM N+ E  ESRQ  L +EQ  QPVE T
Sbjct: 376 IREASDDRKQGETVFSSNSNVDTYGAENPTTALMFNLNENTESRQIFL-DEQAAQPVECT 435

Query: 61  YNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQ 120
           YN F E+EPIN +DKGCQANEQIK S VI+LSDDDE PRAEEHDWNN L+SLIWYYLDPQ
Sbjct: 436 YNYFIESEPINAVDKGCQANEQIKESTVIDLSDDDEPPRAEEHDWNNKLKSLIWYYLDPQ 495

Query: 121 GDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           GDVQGPFCLASLKNWKDANYFPSDFKVW+TGQT+DQAVLL+DILSPFFS
Sbjct: 496 GDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQAVLLNDILSPFFS 543

[Close]

BLAST of Cla97C09G184500 vs. NCBI nr
Match: KGN44311.1 (hypothetical protein Csa_7G252680 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 133/169 (78.70%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MRELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVEST 60
           +RE  DD  QGETVFSSN N D Y AENPTT LM N+ E  ESRQ  L +EQ  QPVE T
Sbjct: 82  IREASDDRKQGETVFSSNSNVDTYGAENPTTALMFNLNENTESRQIFL-DEQAAQPVECT 141

Query: 61  YNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQ 120
           YN F E+EPIN +DKGCQANEQIK S VI+LSDDDE PRAEEHDWNN L+SLIWYYLDPQ
Sbjct: 142 YNYFIESEPINAVDKGCQANEQIKESTVIDLSDDDEPPRAEEHDWNNKLKSLIWYYLDPQ 201

Query: 121 GDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           GDVQGPFCLASLKNWKDANYFPSDFKVW+TGQT+DQAVLL+DILSPFFS
Sbjct: 202 GDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQAVLLNDILSPFFS 249

[Close]

BLAST of Cla97C09G184500 vs. NCBI nr
Match: XP_011659060.1 (PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 133/169 (78.70%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MRELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVEST 60
           +RE  DD  QGETVFSSN N D Y AENPTT LM N+ E  ESRQ  L +EQ  QPVE T
Sbjct: 359 IREASDDRKQGETVFSSNSNVDTYGAENPTTALMFNLNENTESRQIFL-DEQAAQPVECT 418

Query: 61  YNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQ 120
           YN F E+EPIN +DKGCQANEQIK S VI+LSDDDE PRAEEHDWNN L+SLIWYYLDPQ
Sbjct: 419 YNYFIESEPINAVDKGCQANEQIKESTVIDLSDDDEPPRAEEHDWNNKLKSLIWYYLDPQ 478

Query: 121 GDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           GDVQGPFCLASLKNWKDANYFPSDFKVW+TGQT+DQAVLL+DILSPFFS
Sbjct: 479 GDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQAVLLNDILSPFFS 526

[Close]

BLAST of Cla97C09G184500 vs. TrEMBL
Match: tr|A0A0A0K932|A0A0A0K932_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G252680 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69
Identity = 133/169 (78.70%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MRELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVEST 60
           +RE  DD  QGETVFSSN N D Y AENPTT LM N+ E  ESRQ  L +EQ  QPVE T
Sbjct: 82  IREASDDRKQGETVFSSNSNVDTYGAENPTTALMFNLNENTESRQIFL-DEQAAQPVECT 141

Query: 61  YNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQ 120
           YN F E+EPIN +DKGCQANEQIK S VI+LSDDDE PRAEEHDWNN L+SLIWYYLDPQ
Sbjct: 142 YNYFIESEPINAVDKGCQANEQIKESTVIDLSDDDEPPRAEEHDWNNKLKSLIWYYLDPQ 201

Query: 121 GDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           GDVQGPFCLASLKNWKDANYFPSDFKVW+TGQT+DQAVLL+DILSPFFS
Sbjct: 202 GDVQGPFCLASLKNWKDANYFPSDFKVWRTGQTQDQAVLLNDILSPFFS 249

[Close]

BLAST of Cla97C09G184500 vs. TrEMBL
Match: tr|A0A1S3BH52|A0A1S3BH52_CUCME (uncharacterized protein At5g08430 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489617 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.4e-67
Identity = 130/168 (77.38%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 2   RELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTY 61
           RE+ DD  QGETVFSSN   D Y AENPTT LM N+ E AESRQ  L +EQ PQPVE T 
Sbjct: 377 REVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNENAESRQVFL-DEQSPQPVECTC 436

Query: 62  NSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQG 121
           ++ KETEPIN +DKG Q NEQIK S VI+LSDDDE PR EEHDWNN L+SLIW+YLDPQG
Sbjct: 437 DNVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPPRTEEHDWNNRLKSLIWHYLDPQG 496

Query: 122 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           DVQGPFCLASLKNWKDANYFPSDFKVWKTGQT+DQAVLL+DILSPFFS
Sbjct: 497 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAVLLNDILSPFFS 543

[Close]

BLAST of Cla97C09G184500 vs. TrEMBL
Match: tr|A0A1S3BG01|A0A1S3BG01_CUCME (uncharacterized protein At5g08430 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489617 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.4e-67
Identity = 130/168 (77.38%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 2   RELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTY 61
           RE+ DD  QGETVFSSN   D Y AENPTT LM N+ E AESRQ  L +EQ PQPVE T 
Sbjct: 360 REVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNENAESRQVFL-DEQSPQPVECTC 419

Query: 62  NSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQG 121
           ++ KETEPIN +DKG Q NEQIK S VI+LSDDDE PR EEHDWNN L+SLIW+YLDPQG
Sbjct: 420 DNVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPPRTEEHDWNNRLKSLIWHYLDPQG 479

Query: 122 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           DVQGPFCLASLKNWKDANYFPSDFKVWKTGQT+DQAVLL+DILSPFFS
Sbjct: 480 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAVLLNDILSPFFS 526

[Close]

BLAST of Cla97C09G184500 vs. TrEMBL
Match: tr|A0A1S3BGI1|A0A1S3BGI1_CUCME (uncharacterized protein At5g08430 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489617 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.4e-67
Identity = 130/168 (77.38%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 2   RELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTY 61
           RE+ DD  QGETVFSSN   D Y AENPTT LM N+ E AESRQ  L +EQ PQPVE T 
Sbjct: 383 REVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNENAESRQVFL-DEQSPQPVECTC 442

Query: 62  NSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQG 121
           ++ KETEPIN +DKG Q NEQIK S VI+LSDDDE PR EEHDWNN L+SLIW+YLDPQG
Sbjct: 443 DNVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPPRTEEHDWNNRLKSLIWHYLDPQG 502

Query: 122 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           DVQGPFCLASLKNWKDANYFPSDFKVWKTGQT+DQAVLL+DILSPFFS
Sbjct: 503 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAVLLNDILSPFFS 549

[Close]

BLAST of Cla97C09G184500 vs. TrEMBL
Match: tr|A0A1S3BGJ4|A0A1S3BGJ4_CUCME (uncharacterized protein At5g08430 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103489617 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.4e-67
Identity = 130/168 (77.38%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 2   RELLDDTNQGETVFSSNPNGDIYIAENPTTVLMSNVKEFAESRQSVLGEEQPPQPVESTY 61
           RE+ DD  QGETVFSSN   D Y AENPTT LM N+ E AESRQ  L +EQ PQPVE T 
Sbjct: 357 REVSDDRKQGETVFSSNSTVDTYGAENPTTALMFNLNENAESRQVFL-DEQSPQPVECTC 416

Query: 62  NSFKETEPINVMDKGCQANEQIKGSRVINLSDDDETPRAEEHDWNNILRSLIWYYLDPQG 121
           ++ KETEPIN +DKG Q NEQIK S VI+LSDDDE PR EEHDWNN L+SLIW+YLDPQG
Sbjct: 417 DNVKETEPINAVDKGRQENEQIKESTVIDLSDDDEPPRTEEHDWNNRLKSLIWHYLDPQG 476

Query: 122 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 170
           DVQGPFCLASLKNWKDANYFPSDFKVWKTGQT+DQAVLL+DILSPFFS
Sbjct: 477 DVQGPFCLASLKNWKDANYFPSDFKVWKTGQTQDQAVLLNDILSPFFS 523

[Close]

BLAST of Cla97C09G184500 vs. Swiss-Prot
Match: sp|Q9FT92|Y5843_ARATH (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 6.6e-18
Identity = 53/128 (41.41%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 47  VLGEEQPPQPVESTYNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDE---------T 106
           ++G E P +  ES  +  + + P+N +D G Q   Q   S VI LSDDDE          
Sbjct: 427 IIGGETPTE--ESKVSQLQSSIPVNNVDNGSQV--QPNPSEVIELSDDDEDDNGDGETLD 486

Query: 107 PRAEE-HDWNNILRSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQ 165
           P+ E+    +     L W Y DPQG VQGPF L  LK W DA YF   F+VW TG++ + 
Sbjct: 487 PKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMES 546

[Close]

BLAST of Cla97C09G184500 vs. Swiss-Prot
Match: sp|Q9SIV5|C3H19_ARATH (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 113  IWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFF 169
            IW+Y DP G VQGPF +A L+ W +  YFP+  ++WK  ++   +VLL+D L+  F
Sbjct: 1309 IWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKANESPLDSVLLTDALAGLF 1364

[Close]

BLAST of Cla97C09G184500 vs. Swiss-Prot
Match: sp|Q9SD34|C3H44_ARATH (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 90  NLSDDDETPRAEEHDWNNILRSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWK 149
           N S+  ET + +E        S IW+Y DP G  QGPF +  L+ WK + +FP   ++W+
Sbjct: 702 NSSNIQETGKDDE-------ESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWR 761

Query: 150 TGQTRDQAVLLSDILSPFF 169
             + +D++VLL+D L+  F
Sbjct: 762 AHENQDESVLLTDALAGRF 773

[Close]

BLAST of Cla97C09G184500 vs. Swiss-Prot
Match: sp|Q6Y7W8|GGYF2_MOUSE (GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04
Identity = 34/96 (35.42%), Postives = 46/96 (47.92%), Query Frame = 0


Query: 57  VESTYNSFKETEPINVMDKGCQANEQIKGSRVINLSD---DDE--TPRAEEHDWNNILRS 116
           VE+   S   TEP +  ++G +  EQ     V  L D   DDE  T + +EH    +   
Sbjct: 471 VEAPGMSSVSTEPDD--EEGLKHLEQQAEKMVAYLQDSALDDERLTSKLQEHRAKGVSIP 530

Query: 117 LI------WYYLDPQGDVQGPFCLASLKNWKDANYF 142
           L+      WYY DPQG++QGPF    +  W  A YF
Sbjct: 531 LMHEAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYF 564

[Close]

BLAST of Cla97C09G184500 vs. Swiss-Prot
Match: sp|Q5U236|GGYF2_XENLA (GRB10-interacting GYF protein 2 OS=Xenopus laevis OX=8355 GN=gigyf2 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 0


Query: 114 WYYLDPQGDVQGPFCLASLKNWKDANYFP 143
           WYY DPQG++QGPF    +  W  A YFP
Sbjct: 491 WYYKDPQGEIQGPFSNREMAEWYQAGYFP 519

[Close]

BLAST of Cla97C09G184500 vs. TAIR10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF)

HSP 1 Score: 92.0 bits (227), Expect = 3.7e-19
Identity = 53/128 (41.41%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 47  VLGEEQPPQPVESTYNSFKETEPINVMDKGCQANEQIKGSRVINLSDDDE---------T 106
           ++G E P +  ES  +  + + P+N +D G Q   Q   S VI LSDDDE          
Sbjct: 427 IIGGETPTE--ESKVSQLQSSIPVNNVDNGSQV--QPNPSEVIELSDDDEDDNGDGETLD 486

Query: 107 PRAEE-HDWNNILRSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQ 165
           P+ E+    +     L W Y DPQG VQGPF L  LK W DA YF   F+VW TG++ + 
Sbjct: 487 PKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMES 546

[Close]

BLAST of Cla97C09G184500 vs. TAIR10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding)

HSP 1 Score: 68.2 bits (165), Expect = 5.7e-12
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 113  IWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFF 169
            IW+Y DP G VQGPF +A L+ W +  YFP+  ++WK  ++   +VLL+D L+  F
Sbjct: 1309 IWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKANESPLDSVLLTDALAGLF 1364

[Close]

BLAST of Cla97C09G184500 vs. TAIR10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding)

HSP 1 Score: 67.4 bits (163), Expect = 9.7e-12
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 90  NLSDDDETPRAEEHDWNNILRSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWK 149
           N S+  ET + +E        S IW+Y DP G  QGPF +  L+ WK + +FP   ++W+
Sbjct: 702 NSSNIQETGKDDE-------ESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWR 761

Query: 150 TGQTRDQAVLLSDILSPFF 169
             + +D++VLL+D L+  F
Sbjct: 762 AHENQDESVLLTDALAGRF 773

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BLAST of Cla97C09G184500 vs. TAIR10
Match: AT2G18090.1 (PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10
Identity = 20/58 (34.48%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 111 SLIWYYLDPQGDVQGPFCLASLKNWKDANYFPSDFKVWKTGQTRDQAVLLSDILSPFF 169
           +++W Y DP G + GPF L +L+ W  + +FP + ++W+ G+ +  ++LL+D L+  F
Sbjct: 456 NMVWLYGDPDGKIHGPFSLYNLRQWNSSGHFPPELRIWRLGEQQHSSILLTDALNGQF 513

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BLAST of Cla97C09G184500 vs. TAIR10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF)

HSP 1 Score: 62.0 bits (149), Expect = 4.1e-10
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 110 RSLIWYYLDPQGDVQGPFCLASLKNWKDANYFPS--DFKVWKTGQTRDQAVLLSDILS 166
           + ++W+Y  P+G   GPF L  LK W D  YF    DFKVWKTG++   AVLL+ +LS
Sbjct: 512 KKVMWFYEYPKGKTHGPFSLTDLKTWSDEEYFVGVPDFKVWKTGES---AVLLTKLLS 566

The following BLAST results are available for this feature:

BLAST of Cla97C09G184500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969376.1	1.4e-69	80.84	uncharacterized protein At5g08430 isoform X2 [Cucurbita maxima]	[more]
XP_022969375.1	1.4e-69	80.84	uncharacterized protein At5g08430 isoform X1 [Cucurbita maxima]	[more]
XP_004148294.1	1.9e-69	78.70	PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis sativus]	[more]
KGN44311.1	1.9e-69	78.70	hypothetical protein Csa_7G252680 [Cucumis sativus]	[more]
XP_011659060.1	1.9e-69	78.70	PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis sativus]	[more]

BLAST of Cla97C09G184500 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K932\|A0A0A0K932_CUCSA	1.2e-69	78.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G252680 PE=4 SV=1	[more]
tr\|A0A1S3BH52\|A0A1S3BH52_CUCME	4.4e-67	77.38	uncharacterized protein At5g08430 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A1S3BG01\|A0A1S3BG01_CUCME	4.4e-67	77.38	uncharacterized protein At5g08430 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A1S3BGI1\|A0A1S3BGI1_CUCME	4.4e-67	77.38	uncharacterized protein At5g08430 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A1S3BGJ4\|A0A1S3BGJ4_CUCME	4.4e-67	77.38	uncharacterized protein At5g08430 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of Cla97C09G184500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FT92\|Y5843_ARATH	6.6e-18	41.41	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 P...	[more]
sp\|Q9SIV5\|C3H19_ARATH	1.0e-10	44.64	Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9SD34\|C3H44_ARATH	1.7e-10	36.71	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q6Y7W8\|GGYF2_MOUSE	1.4e-04	35.42	GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2	[more]
sp\|Q5U236\|GGYF2_XENLA	3.2e-04	55.17	GRB10-interacting GYF protein 2 OS=Xenopus laevis OX=8355 GN=gigyf2 PE=2 SV=1	[more]

BLAST of Cla97C09G184500 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08430.1	3.7e-19	41.41	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT2G16485.1	5.7e-12	44.64	nucleic acid binding;zinc ion binding;DNA binding	[more]
AT3G51120.1	9.7e-12	36.71	DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding	[more]
AT2G18090.1	1.4e-10	34.48	PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF ...	[more]
AT5G23480.1	4.1e-10	48.28	SWIB/MDM2 domain;Plus-3;GYF	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035445	GYF-like_dom_sf
IPR003169	GYF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G184500.1	Cla97C09G184500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003169	GYF domain	SMART	SM00444	gyf_5	coord: 112..167 e-value: 2.4E-5 score: 33.8
IPR003169	GYF domain	PFAM	PF02213	GYF	coord: 113..155 e-value: 1.9E-10 score: 40.2
IPR003169	GYF domain	PROSITE	PS50829	GYF	coord: 111..165 score: 14.231
IPR035445	GYF-like domain superfamily	GENE3D	G3DSA:3.30.1490.40		coord: 112..169 e-value: 7.6E-26 score: 91.2
IPR035445	GYF-like domain superfamily	SUPERFAMILY	SSF55277	GYF domain	coord: 108..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR14445	GRB10 INTERACTING GYF PROTEIN	coord: 67..165
None	No IPR available	PANTHER	PTHR14445:SF39	SWIB/MDM2, PLUS-3 AND GYF DOMAIN-CONTAINING PROTEIN	coord: 67..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C09G184500	Csa7G252680	Cucumber (Chinese Long) v2	cuwmbB559
Cla97C09G184500	ClCG09G022930	Watermelon (Charleston Gray)	wcgwmbB035
Cla97C09G184500	CSPI07G11190	Wild cucumber (PI 183967)	cpiwmbB585
Cla97C09G184500	Lsi11G015790	Bottle gourd (USVL1VR-Ls)	lsiwmbB109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C09G184500	Silver-seed gourd	carwmbB0559
Cla97C09G184500	Cucumber (Gy14) v2	cgybwmbB531
Cla97C09G184500	Cucumber (Gy14) v1	cgywmbB430
Cla97C09G184500	Cucurbita maxima (Rimu)	cmawmbB547
Cla97C09G184500	Cucurbita moschata (Rifu)	cmowmbB528
Cla97C09G184500	Cucumber (Chinese Long) v3	cucwmbB582
Cla97C09G184500	Melon (DHL92) v3.6.1	medwmbB213
Cla97C09G184500	Melon (DHL92) v3.5.1	mewmbB227
Cla97C09G184500	Watermelon (97103) v1	wmwmbB042