Cla97C09G183270 (gene) Watermelon (97103) v2

Overview
NameCla97C09G183270
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionNAD(P)H-quinone oxidoreductase subunit M, chloroplastic
LocationCla97Chr09 : 36512216 .. 36513982 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAACAGCAGCAGCTTCATCTTACATGGTGTTTTCTATGGTGGGTTGGAAAAATGGGAAACAAAACACAAAATCCACAGCCAGATTTCCCATCTCAGCTCAAATCAATGAAGCTGCAGAGCAGCTAAAAGTGGGAGAGGAGGAAGAAGAAGAGGCAAAGCCGAAACCGAAACCGCAGCCGTTGCGGCCGGTCGAAGTACAGCAGAATGTAAAGAGCAAAAACATGGGCAGAGAGTATGGAGGGCAATGGCTTAGCAGTGTGACAAGGCATGTTAGAATATATGCAGCTTATATTGACCCTATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGCAATGAGTTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTATTTTTTTCCCTTTCTTTAGTGTTTTATGGTTGTTCATATCATGGGTTAGTTTAGTGGTTTTCGAAAATGATTCGGGTTTGTATTTGAAATTGAACCTAAAGAAATTTTAAATACATTATTATGTACTTTTATTGATTGTTTGTTGATTGTTGTTAGTGTCCATACGAAGGTGTATATATTTCAATTGACAAAGCAATGATTGAAGCCCACAATATTTGGCATTGAAATTTTGTAAAATATTTATATTCTAAGTAGCAATTGTAGGATGAATTCACGAGATCAAATACGTAACACATCATCTCTTTTATTATTTGGTCTCATTTGGTATCTATTTTATTTTTGGTTTTTAAAAATAAGTCTATTTTCTCTCAATTTGTTACAATGGATTTCATTTTCCTTCAAGAATTGAATTCTTAGCCAAATTTTAAAAACAAAAACAAGTTTTTAAAAACTACTTTGTTTGATGTTCAAAACTTAACTAAATTTTTCAAAACATATGTAGAAAGTAGATAATAAAGTAAAAAATTTAAAAGTGAAAAGGATATCTATAGACTTAATTTTTAAAAATTAAAAACAAAAAACCGAATAATTATCAAACAAGGCTTTAATGAATCTAGGGTGGTTGATGAGTCTAAAGACAATAGATATTTAGGGACAAATTTCCATTAAATTGAGAGGCATAAGATTTTTTATTTTATTTCTTTATTTAAAAAAAATGCTAAATTCAAAAAGTATCCTAATTTTTCCAATTACAATATTAGTTTGACTTTTCTCCACACCTTATTTAGGTCCCAATTTCCATCCAAAAGACCAAGGGCAATATTACATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTTTAGCCCAATAAAATAAAATAAAATAAATAAAATTCAAGCACTAAGAAAATTGATTTATTACTTCATTTGGTACTTTGTACTCTAAATTTTGATTCCTATACTTTAAGAATTGTTCAATTTTAGTCTCTACTTTCAAATGTCTAATTCTAGTTTCAATACTTCGTATAAATCTTAAATTTAATCCATCAAATTTAATAAGGTACACGGTCTAAAATTGTTTTGGTTGAGTGTGTTTTTTATTTGTGGAAAGCAGGGAGCTCCATTGACAGAATATACACTTCGGCTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTACCCCAGGATCTACAATCACAATAA

mRNA sequence

ATGGCAACAACAGCAGCAGCTTCATCTTACATGGTGTTTTCTATGGTGGGTTGGAAAAATGGGAAACAAAACACAAAATCCACAGCCAGATTTCCCATCTCAGCTCAAATCAATGAAGCTGCAGAGCAGCTAAAAGTGGGAGAGGAGGAAGAAGAAGAGGCAAAGCCGAAACCGAAACCGCAGCCGTTGCGGCCGGTCGAAGTACAGCAGAATGTAAAGAGCAAAAACATGGGCAGAGAGTATGGAGGGCAATGGCTTAGCAGTGTGACAAGGCATGTTAGAATATATGCAGCTTATATTGACCCTATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGCAATGAGTTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTCGGCTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTACCCCAGGATCTACAATCACAATAA

Coding sequence (CDS)

ATGGCAACAACAGCAGCAGCTTCATCTTACATGGTGTTTTCTATGGTGGGTTGGAAAAATGGGAAACAAAACACAAAATCCACAGCCAGATTTCCCATCTCAGCTCAAATCAATGAAGCTGCAGAGCAGCTAAAAGTGGGAGAGGAGGAAGAAGAAGAGGCAAAGCCGAAACCGAAACCGCAGCCGTTGCGGCCGGTCGAAGTACAGCAGAATGTAAAGAGCAAAAACATGGGCAGAGAGTATGGAGGGCAATGGCTTAGCAGTGTGACAAGGCATGTTAGAATATATGCAGCTTATATTGACCCTATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGCAATGAGTTCCTTTGGAATCCTCAAACTTGCAACAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTCGGCTAATAGGTTCAGACATAGAACACTATATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAATGATCTACCCCAGGATCTACAATCACAATAA

Protein sequence

MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEEEEEEAKPKPKPQPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLPQDLQSQ
Homology
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BLAST of Cla97C09G183270 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 3.3e-100
Identity = 184/209 (88.04%), Postives = 190/209 (90.91%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXX 60
           MAT AAASSY++FSMVGWKNGKQNTK T RFPISAQ+NEAAEQLKVG+            
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  XXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
              RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 209
           NARVLNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

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BLAST of Cla97C09G183270 vs. NCBI nr
Match: XP_004139803.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44204.1 hypothetical protein Csa_7G221360 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 6.8e-98
Identity = 192/209 (91.87%), Postives = 198/209 (94.74%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXX 60
           MA  AAASSY++FSMVGWKNG QNTK T RFPISAQINEAAEQLK G+   XXXXXXXXX
Sbjct: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEXXXXXXXXX 60

Query: 61  XXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
           XX RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL+LD
Sbjct: 61  XXLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 209
           NARVLNFSMGKPRIMFNANDLPQ DLQS+
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209

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BLAST of Cla97C09G183270 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 7.6e-97
Identity = 193/207 (93.24%), Postives = 198/207 (95.65%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXX 60
           MAT  AASSYMVFSMVGWKNGKQNT+ +ARFPISAQINEAAEQLKVGE  XXXXXXXXXX
Sbjct: 1   MAT--AASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGE-EXXXXXXXXXX 60

Query: 61  XXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
           XX RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILD
Sbjct: 61  XXLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQDLQS 208
           NARVLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 181 NARVLNFSMGKPRIMFNSNDLPQDLQS 204

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BLAST of Cla97C09G183270 vs. NCBI nr
Match: XP_022981611.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima])

HSP 1 Score: 362.8 bits (930), Expect = 7.6e-97
Identity = 178/204 (87.25%), Postives = 184/204 (90.20%), Query Frame = 0 

Query: 4   TAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXXXXX 63
           + AASSYMVFSMVGWKNGKQNT+ +ARFPISAQINEAAEQLKVGE               
Sbjct: 2   STAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGE--EEEAKPKPPLSPL 61

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILDPSN
Sbjct: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121

Query: 124 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 122 EFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181

Query: 184 VLNFSMGKPRIMFNANDLPQDLQS 208
           VLNFSMGKPRIMFN+NDLPQDLQS
Sbjct: 182 VLNFSMGKPRIMFNSNDLPQDLQS 203

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BLAST of Cla97C09G183270 vs. NCBI nr
Match: XP_022139618.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Momordica charantia])

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 180/204 (88.24%), Postives = 184/204 (90.20%), Query Frame = 0 

Query: 5   AAASSYMVFSMVGWKNGKQNTKSTA--RFPISAQINEAAEQLKVGEXXXXXXXXXXXXXX 64
           AAASSYMV  MVGW+  K ++K T   R PISAQ NEAAEQLKVGE     XXXXXXXXX
Sbjct: 2   AAASSYMVSPMVGWREPKGHSKPTTRNRVPISAQANEAAEQLKVGE---NEXXXXXXXXX 61

Query: 65  XRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 124
           XRPVEVQQNVKSKNM REYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS
Sbjct: 62  XRPVEVQQNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPS 121

Query: 125 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 184
           NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 122 NEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181

Query: 185 RVLNFSMGKPRIMFNANDLPQDLQ 207
           +VLNFSMGKPRIMFN NDLPQ  Q
Sbjct: 182 KVLNFSMGKPRIMFNNNDLPQPNQ 202

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BLAST of Cla97C09G183270 vs. TrEMBL
Match: tr|A0A1S3BGV5|A0A1S3BGV5_CUCME (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489705 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.2e-100
Identity = 184/209 (88.04%), Postives = 190/209 (90.91%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXX 60
           MAT AAASSY++FSMVGWKNGKQNTK T RFPISAQ+NEAAEQLKVG+            
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  XXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
              RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 209
           NARVLNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]
BLAST of Cla97C09G183270 vs. TrEMBL
Match: tr|A0A0A0K5H1|A0A0A0K5H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.5e-98
Identity = 192/209 (91.87%), Postives = 198/209 (94.74%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXX 60
           MA  AAASSY++FSMVGWKNG QNTK T RFPISAQINEAAEQLK G+   XXXXXXXXX
Sbjct: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEXXXXXXXXX 60

Query: 61  XXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
           XX RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL+LD
Sbjct: 61  XXLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           PSNEFLWNP+TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180

Query: 181 NARVLNFSMGKPRIMFNANDLPQ-DLQSQ 209
           NARVLNFSMGKPRIMFNANDLPQ DLQS+
Sbjct: 181 NARVLNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]
BLAST of Cla97C09G183270 vs. TrEMBL
Match: tr|A0A2N9G9Z3|A0A2N9G9Z3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24167 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 152/211 (72.04%), Postives = 166/211 (78.67%), Query Frame = 0 

Query: 5   AAASSYMV---FSMVGWKNGKQNTKSTARFPISAQINEA------AEQLKVGEXXXXXXX 64
           AA SSYM    FSM GW  GK+  +    F ISAQ  +A              XXXXXXX
Sbjct: 2   AAISSYMACTKFSMSGWIGGKREMRKRNPFSISAQQQQAXXXXXXXXXXXXXXXXXXXXX 61

Query: 65  XXXXXXXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKL 124
           XX      RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKL
Sbjct: 62  XXQQGTPLRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKL 121

Query: 125 TLILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGE 184
           TLILDP+ EF+WN +TCNKVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+L+DGE
Sbjct: 122 TLILDPTEEFVWNSETCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLFDGE 181

Query: 185 IKYNMNARVLNFSMGKPRIMFNANDLPQDLQ 207
           IKYNMNARVLNFSMGKPR++FN +  PQD+Q
Sbjct: 182 IKYNMNARVLNFSMGKPRVLFNHDGQPQDVQ 212

[Close]
BLAST of Cla97C09G183270 vs. TrEMBL
Match: tr|C9EIN8|C9EIN8_OLEEU (Putative NADH dehydrogenase OS=Olea europaea OX=4146 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.6e-71
Identity = 133/200 (66.50%), Postives = 155/200 (77.50%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXX 60
           MA T+   +   FSM+GW++ K   +  + F +S+Q+ +  EQ+K  E            
Sbjct: 1   MAATSTCMASTTFSMLGWRSSKSEVRKKSVFSVSSQLAKIEEQVKTVEATKEKDTKQHAT 60

Query: 61  XXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILD 120
              RP+E Q NVKSKNMGREYGGQWLSS T HVRIYAAYIDP TCEF QTQMDKLTLILD
Sbjct: 61  TPLRPIEPQVNVKSKNMGREYGGQWLSSATIHVRIYAAYIDPETCEFAQTQMDKLTLILD 120

Query: 121 PSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 180
           P++EF+W  +TCNKVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LY+GEI+YNM
Sbjct: 121 PTDEFVWTDETCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYEGEIQYNM 180

Query: 181 NARVLNFSMGKPRIMFNAND 201
           NAR+LNFSMGKPRI FN ND
Sbjct: 181 NARMLNFSMGKPRIGFNYND 200

[Close]
BLAST of Cla97C09G183270 vs. TrEMBL
Match: tr|B9H7J7|B9H7J7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G183000v3 PE=4 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 8.0e-71
Identity = 147/204 (72.06%), Postives = 161/204 (78.92%), Query Frame = 0 

Query: 5   AAASSYMV---FSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXXX 64
           AA+SSYM    FSM+GW  G++  K   R  IS    E AE  +  E  XXXXX      
Sbjct: 2   AASSSYMACAKFSMLGWLGGRRELK--MRRVISVSPQEQAEVQESQEVNXXXXXKVKQPV 61

Query: 65  XXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDP 124
             RPVE Q NVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLILDP
Sbjct: 62  QPRPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDP 121

Query: 125 SNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMN 184
           ++EF+W  +TC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNMN
Sbjct: 122 TDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMN 181

Query: 185 ARVLNFSMGKPRIMFNANDLPQDL 206
           ARVLNFSMGKPRI+FN +   QD+
Sbjct: 182 ARVLNFSMGKPRILFNNDGQLQDV 203

[Close]
BLAST of Cla97C09G183270 vs. Swiss-Prot
Match: sp|A7NVJ4|NDHM_VITVI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.6e-74
Identity = 155/209 (74.16%), Postives = 171/209 (81.82%), Query Frame = 0 

Query: 1   MATTAAASSYMVFSMVGWKNGKQNTKSTARFPISAQ---INEAAEQLKVGEXXXXXXXXX 60
           MA T++ ++   FSM+GW  GK+  +    F ISAQ               XXXXXXXXX
Sbjct: 1   MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTL 120
           XXXX  RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL
Sbjct: 61  XXXXLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120

Query: 121 ILDPSNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIK 180
           ILDP+NEF+W  +TCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIK
Sbjct: 121 ILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIK 180

Query: 181 YNMNARVLNFSMGKPRIMFNANDLPQDLQ 207
           YNMNARVLNFSMGKPRI+FN + LPQ++Q
Sbjct: 181 YNMNARVLNFSMGKPRILFN-DGLPQNVQ 208

[Close]
BLAST of Cla97C09G183270 vs. Swiss-Prot
Match: sp|A9PJQ8|NDHM_POPJC (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.0e-73
Identity = 147/204 (72.06%), Postives = 161/204 (78.92%), Query Frame = 0 

Query: 5   AAASSYMV---FSMVGWKNGKQNTKSTARFPISAQINEAAEQLKVGEXXXXXXXXXXXXX 64
           AA+SSYM    FSM+GW  G++  K   R  IS    E AE  +  E  XXXXX      
Sbjct: 2   AASSSYMACAKFSMLGWLGGRRELK--MRRVISVSPQEQAEVQESQEVNXXXXXKVKQPV 61

Query: 65  XXRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDP 124
             RPVE Q NVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLILDP
Sbjct: 62  QPRPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDP 121

Query: 125 SNEFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMN 184
           ++EF+W  +TC KVY+YFQELVDHYEGAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNMN
Sbjct: 122 TDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMN 181

Query: 185 ARVLNFSMGKPRIMFNANDLPQDL 206
           ARVLNFSMGKPRI+FN +   QD+
Sbjct: 182 ARVLNFSMGKPRILFNNDGQLQDV 203

[Close]
BLAST of Cla97C09G183270 vs. Swiss-Prot
Match: sp|Q2V2S7|NDHM_ARATH (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-63
Identity = 112/138 (81.16%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYIDP TCEFDQ+QMDKLTLILDP+ 
Sbjct: 69  RPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFDQSQMDKLTLILDPTE 128

Query: 124 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLIGSD+EHYIRKML+DGEI+YNM+AR
Sbjct: 129 EFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNMDAR 188

Query: 184 VLNFSMGKPRIMFNANDL 202
           VLNFSMGKPR+ FN +++
Sbjct: 189 VLNFSMGKPRVQFNTSNI 205

[Close]
BLAST of Cla97C09G183270 vs. Swiss-Prot
Match: sp|A2XVZ1|NDHM_ORYSI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.8e-57
Identity = 101/139 (72.66%), Postives = 120/139 (86.33%), Query Frame = 0 

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSN 123
           +P+ VQ   +SKNM REYGGQWLS  TRH+RIYAAYI+P T  FDQTQMDKLTL+LDP++
Sbjct: 79  QPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTD 138

Query: 124 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EF+W  +TC KVY  FQ+LVDHYEGA L+EYTLRLIGSD+EH+IRK+LYDGEIKYNM +R
Sbjct: 139 EFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSR 198

Query: 184 VLNFSMGKPRIMFNANDLP 203
           VLNFSMGKPRI FN++ +P
Sbjct: 199 VLNFSMGKPRIKFNSSQIP 217

[Close]
BLAST of Cla97C09G183270 vs. Swiss-Prot
Match: sp|Q7FB12|NDHM_ORYSJ (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.8e-57
Identity = 101/139 (72.66%), Postives = 120/139 (86.33%), Query Frame = 0 

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSN 123
           +P+ VQ   +SKNM REYGGQWLS  TRH+RIYAAYI+P T  FDQTQMDKLTL+LDP++
Sbjct: 79  QPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTD 138

Query: 124 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EF+W  +TC KVY  FQ+LVDHYEGA L+EYTLRLIGSD+EH+IRK+LYDGEIKYNM +R
Sbjct: 139 EFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSR 198

Query: 184 VLNFSMGKPRIMFNANDLP 203
           VLNFSMGKPRI FN++ +P
Sbjct: 199 VLNFSMGKPRIKFNSSQIP 217

[Close]
BLAST of Cla97C09G183270 vs. TAIR10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex)

HSP 1 Score: 244.2 bits (622), Expect = 7.1e-65
Identity = 112/138 (81.16%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYIDP TCEFDQ+QMDKLTLILDP+ 
Sbjct: 69  RPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFDQSQMDKLTLILDPTE 128

Query: 124 EFLWNPQTCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 183
           EF+W+ ++CNKVY+YFQELVDHYEGAPLTEYTLRLIGSD+EHYIRKML+DGEI+YNM+AR
Sbjct: 129 EFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNMDAR 188

Query: 184 VLNFSMGKPRIMFNANDL 202
           VLNFSMGKPR+ FN +++
Sbjct: 189 VLNFSMGKPRVQFNTSNI 205

The following BLAST results are available for this feature:
BLAST of Cla97C09G183270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447195.13.3e-10088.04PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo... [more]
XP_004139803.16.8e-9891.87PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sati... [more]
XP_022940621.17.6e-9793.24NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP... [more]
XP_022981611.17.6e-9787.25NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima][more]
XP_022139618.13.8e-8888.24NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Momordica charantia][more]
BLAST of Cla97C09G183270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BGV5|A0A1S3BGV5_CUCME2.2e-10088.04NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Cucumis melo OX=3656 ... [more]
tr|A0A0A0K5H1|A0A0A0K5H1_CUCSA4.5e-9891.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=4 SV=1[more]
tr|A0A2N9G9Z3|A0A2N9G9Z3_FAGSY1.5e-7272.04Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24167 PE=4 SV=1[more]
tr|C9EIN8|C9EIN8_OLEEU1.6e-7166.50Putative NADH dehydrogenase OS=Olea europaea OX=4146 PE=2 SV=1[more]
tr|B9H7J7|B9H7J7_POPTR8.0e-7172.06Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G183000v3 PE=... [more]
BLAST of Cla97C09G183270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A7NVJ4|NDHM_VITVI3.6e-7474.16NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297... [more]
sp|A9PJQ8|NDHM_POPJC4.0e-7372.06NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640... [more]
sp|Q2V2S7|NDHM_ARATH1.3e-6381.16NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ... [more]
sp|A2XVZ1|NDHM_ORYSI6.8e-5772.66NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i... [more]
sp|Q7FB12|NDHM_ORYSJ6.8e-5772.66NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j... [more]
BLAST of Cla97C09G183270 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37925.17.1e-6581.16subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016655oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR018922NdhM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly
biological_process GO:0006810 transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0005575 cellular_component
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0048038 quinone binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G183270.1Cla97C09G183270.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018922NAD(P)H-quinone oxidoreductase subunit MPFAMPF10664NdhMcoord: 86..194
e-value: 4.1E-45
score: 152.3
IPR018922NAD(P)H-quinone oxidoreductase subunit MPANTHERPTHR36900FAMILY NOT NAMEDcoord: 1..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..68

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C09G183270Cla005578Watermelon (97103) v1wmwmbB042
Cla97C09G183270ClCG09G021820Watermelon (Charleston Gray)wcgwmbB035
Cla97C09G183270CmaCh01G010350Cucurbita maxima (Rimu)cmawmbB514
Cla97C09G183270CmoCh01G010740Cucurbita moschata (Rifu)cmowmbB497
Cla97C09G183270Lsi02G017770Bottle gourd (USVL1VR-Ls)lsiwmbB214
Cla97C09G183270Carg23372Silver-seed gourdcarwmbB0073
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C09G183270Wax gourdwgowmbB609
Cla97C09G183270Silver-seed gourdcarwmbB1092
Cla97C09G183270Cucurbita maxima (Rimu)cmawmbB048
Cla97C09G183270Cucurbita moschata (Rifu)cmowmbB035