Cla97C09G176340 (gene) Watermelon (97103) v2

Overview
NameCla97C09G176340
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionCalcium-binding EF-hand family protein
LocationCla97Chr09 : 20390472 .. 20390885 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTGGAAATATTGGATAGTGCCACCATCGTCAACTTCGTCGAAGACGATATAGCTTTTGGTGCATACATGAGAGACCGTTTTGCTCACCTTGACACCAACCATGATGGTCTTCTTTCCTACAGTGAGATGTTGGAGGAGTTACACACCCTCAGGGTCTTCGAGACCCATTTCGGAATCGATGTGAAGCCTGATCCGGAGGAGCTTTCTACAGTTTATAGTTCTTTGTTTTTACAGTTTGATCGTGACTCGAGTGGAACAGTTGATCTGGATGAGTTTATGGCTGAGAGCAGAAGGATGATGTTAGCTATGGCTAATGGGATGGGATTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACAGCAATAATAGCCGCTTGA

mRNA sequence

ATGAGTGTGGAAATATTGGATAGTGCCACCATCGTCAACTTCGTCGAAGACGATATAGCTTTTGGTGCATACATGAGAGACCGTTTTGCTCACCTTGACACCAACCATGATGGTCTTCTTTCCTACAGTGAGATGTTGGAGGAGTTACACACCCTCAGGGTCTTCGAGACCCATTTCGGAATCGATGTGAAGCCTGATCCGGAGGAGCTTTCTACAGTTTATAGTTCTTTGTTTTTACAGTTTGATCGTGACTCGAGTGGAACAGTTGATCTGGATGAGTTTATGGCTGAGAGCAGAAGGATGATGTTAGCTATGGCTAATGGGATGGGATTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACAGCAATAATAGCCGCTTGA

Coding sequence (CDS)

ATGAGTGTGGAAATATTGGATAGTGCCACCATCGTCAACTTCGTCGAAGACGATATAGCTTTTGGTGCATACATGAGAGACCGTTTTGCTCACCTTGACACCAACCATGATGGTCTTCTTTCCTACAGTGAGATGTTGGAGGAGTTACACACCCTCAGGGTCTTCGAGACCCATTTCGGAATCGATGTGAAGCCTGATCCGGAGGAGCTTTCTACAGTTTATAGTTCTTTGTTTTTACAGTTTGATCGTGACTCGAGTGGAACAGTTGATCTGGATGAGTTTATGGCTGAGAGCAGAAGGATGATGTTAGCTATGGCTAATGGGATGGGATTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACAGCAATAATAGCCGCTTGA

Protein sequence

MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIIAA
Homology
[Close]
BLAST of Cla97C09G176340 vs. NCBI nr
Match: XP_011657544.1 (PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus] >KGN47942.1 hypothetical protein Csa_6G418660 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 7.3e-64
Identity = 127/137 (92.70%), Postives = 134/137 (97.81%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSSLFLQFDRDSSGTVDLDEF AE++RMMLAMANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C09G176340 vs. NCBI nr
Match: XP_008449396.1 (PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 7.3e-64
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDPEELS+VYSSLFLQFD DSSGTVDLDEF AE++RMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C09G176340 vs. NCBI nr
Match: XP_022135623.1 (uncharacterized protein LOC111007532 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 2.7e-58
Identity = 118/137 (86.13%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVED+ AF A++RDRFAHLDTNHDGLLSY+EML EL +LRVFE HFG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDP+ELSTVYSSLFLQFD DSSG VDLDEF AE++RMMLA ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFLMKAVERET I+AA
Sbjct: 121 GSFLMKAVERETTIMAA 137

[Close]
BLAST of Cla97C09G176340 vs. NCBI nr
Match: XP_022989004.1 (uncharacterized protein LOC111486198 [Cucurbita maxima])

HSP 1 Score: 224.6 bits (571), Expect = 2.1e-55
Identity = 113/135 (83.70%), Postives = 126/135 (93.33%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVED+ AFGA++ DRFAHLDTNHDGLLSYSEML+EL +LRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFGAFIGDRFAHLDTNHDGLLSYSEMLKELQSLRVIEADFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSS+FLQFDR+SSGTVDLDEF AE++RMMLAMANG+G LPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLAMANGIGALPVQMVLEE 120

Query: 121 GSFLMKAVERETAII 136
           GSFLMKAVERE AI+
Sbjct: 121 GSFLMKAVEREVAIM 135

[Close]
BLAST of Cla97C09G176340 vs. NCBI nr
Match: XP_023529816.1 (uncharacterized protein LOC111792530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 8.0e-55
Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVED+ AFGA + DRFAHLDTNHDGLLSYSEML+EL +LRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSYSEMLKELQSLRVIEADFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSS+FLQFDR+SSGTVDLDEF AE++RMMLAMANG+G LPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLAMANGIGALPVQMVLEE 120

Query: 121 GSFLMKAVERETAII 136
           GSFLMKAVERE AI+
Sbjct: 121 GSFLMKAVEREVAIM 135

[Close]
BLAST of Cla97C09G176340 vs. TrEMBL
Match: tr|A0A1S3BLY5|A0A1S3BLY5_CUCME (uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.8e-64
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDPEELS+VYSSLFLQFD DSSGTVDLDEF AE++RMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C09G176340 vs. TrEMBL
Match: tr|A0A0A0KHT7|A0A0A0KHT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.8e-64
Identity = 127/137 (92.70%), Postives = 134/137 (97.81%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDSATIVNFVEDD+AFGA++RDRFAHLDTN DGLLSYSEMLEELHTLRVFETHFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSSLFLQFDRDSSGTVDLDEF AE++RMMLAMANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C09G176340 vs. TrEMBL
Match: tr|A0A1S3C175|A0A1S3C175_CUCME (uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-53
Identity = 111/137 (81.02%), Postives = 121/137 (88.32%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVEILDS TIVNFVED+ AF AY+RDRF HLDTNHDGLLSY+EMLEEL +LRVFE  FG
Sbjct: 1   MSVEILDSTTIVNFVEDEAAFNAYIRDRFTHLDTNHDGLLSYNEMLEELQSLRVFEADFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
            D K DP+ELS+VYSSLFLQFDRDS G VDLD +  E +RMMLAMANG+GFLPVQMVLEE
Sbjct: 61  NDKKLDPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFLMKAVERETAI+AA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]
BLAST of Cla97C09G176340 vs. TrEMBL
Match: tr|A0A061DTS7|A0A061DTS7_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_002258 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.4e-52
Identity = 105/137 (76.64%), Postives = 124/137 (90.51%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVE+LDSATIVNFVED+ AF  ++ DRFAHLDT+HDGLLSY+E+L+EL +LRVFETHFG
Sbjct: 1   MSVEVLDSATIVNFVEDEEAFNVWICDRFAHLDTDHDGLLSYAELLKELQSLRVFETHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           IDVK DP+EL+ VY+SLF+QFD DS+GTVDL EF AES+RMMLAMANGMGFLPVQM+LEE
Sbjct: 61  IDVKTDPKELAHVYNSLFVQFDHDSNGTVDLGEFKAESKRMMLAMANGMGFLPVQMLLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
           GSFL KAV+RE+  +AA
Sbjct: 121 GSFLKKAVDRESTKLAA 137

[Close]
BLAST of Cla97C09G176340 vs. TrEMBL
Match: tr|V4U9W3|V4U9W3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018069mg PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.7e-51
Identity = 103/137 (75.18%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           MSVE+LDSATIV+FVED+ AF   +R+RFAHLDT+HDGLLSY+EM++EL +LRVFETHFG
Sbjct: 1   MSVEVLDSATIVSFVEDEEAFNNSIRNRFAHLDTDHDGLLSYAEMMQELKSLRVFETHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEE 120
           ID KPDPEEL++VY+SLF+QFD DS+GTVDL+EF AE+++MMLAMANG+GFLPVQMVLEE
Sbjct: 61  IDEKPDPEELASVYNSLFVQFDHDSNGTVDLEEFKAETKQMMLAMANGLGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIIAA 138
            SFLMKAVE+E+   AA
Sbjct: 121 DSFLMKAVEKESTAKAA 137

[Close]
BLAST of Cla97C09G176340 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-27
Identity = 57/135 (42.22%), Postives = 95/135 (70.37%), Query Frame = 0 

Query: 1   MSVEILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60
           M V ++D +T+ +FV+D+  F   + +RFA LD N DG+LS SE+ +   ++R+ E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDVKPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVL-- 120
           +DV    +EL+ +Y S+F +FD D SG+VDL+EF +E ++++LA+A+G+G  P+ MVL  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EEGSFLMKAVERETA 134
           ++ +FL KA + E +
Sbjct: 121 DDDNFLKKAADLEAS 135

[Close]
BLAST of Cla97C09G176340 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 40/128 (31.25%), Postives = 70/128 (54.69%), Query Frame = 0 

Query: 5   ILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDVK 64
           ++ S T++ F+ D  +F +   D F  LD + +G+LS SE+ + L+ +   E+    +V 
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVES----EVA 64

Query: 65  PDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEEGSFL 124
           P  +E   VY+++F +F  D     +  + +AE   ++ AMA G+G  PV MV+     +
Sbjct: 65  PG-DETDNVYNAIFERFGEDLV-PKNFRDLIAE---ILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 MKAVERET 133
           MKAV  E+
Sbjct: 125 MKAVLHES 123

[Close]
BLAST of Cla97C09G176340 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 47.4 bits (111), Expect = 8.4e-06
Identity = 31/125 (24.80%), Postives = 58/125 (46.40%), Query Frame = 0 

Query: 4   EILDSATIVNFVEDDIAFGAYMRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFGIDV 63
           ++LD + IV  VE++  F  ++  +F  LD + DG LS +E+   +  +       G+  
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADI---GAALGLPA 72

Query: 64  KPDPEELSTVYSSLFLQFDRDSSGTVDLDEFMAESRRMMLAMANGMGFLPVQMVLEEGSF 123
           +    +   +YS +  +F   S   V   EF      ++L MA G+   P+ ++  +G  
Sbjct: 73  QGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 124 LMKAV 129
           L + V
Sbjct: 133 LSEFV 134

The following BLAST results are available for this feature:
BLAST of Cla97C09G176340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011657544.17.3e-6492.70PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus] >KGN47942.1 hy... [more]
XP_008449396.17.3e-6492.70PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo][more]
XP_022135623.12.7e-5886.13uncharacterized protein LOC111007532 [Momordica charantia][more]
XP_022989004.12.1e-5583.70uncharacterized protein LOC111486198 [Cucurbita maxima][more]
XP_023529816.18.0e-5583.70uncharacterized protein LOC111792530 [Cucurbita pepo subsp. pepo][more]
BLAST of Cla97C09G176340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BLY5|A0A1S3BLY5_CUCME4.8e-6492.70uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=... [more]
tr|A0A0A0KHT7|A0A0A0KHT7_CUCSA4.8e-6492.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1[more]
tr|A0A1S3C175|A0A1S3C175_CUCME1.3e-5381.02uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=... [more]
tr|A0A061DTS7|A0A061DTS7_THECC9.4e-5276.64Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_002258 ... [more]
tr|V4U9W3|V4U9W3_9ROSI4.7e-5175.18Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018069mg PE=4 ... [more]
BLAST of Cla97C09G176340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C09G176340 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44310.13.9e-2742.22Calcium-binding EF-hand family protein[more]
AT1G54530.11.8e-0831.25Calcium-binding EF hand family protein[more]
AT4G38810.28.4e-0624.80Calcium-binding EF-hand family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G176340.1Cla97C09G176340.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 24..52
e-value: 1.7
score: 15.9
coord: 73..101
e-value: 3.5
score: 13.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 25..96
e-value: 1.1E-11
score: 44.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..104
score: 8.349
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 20..55
score: 8.99
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 10..107
e-value: 2.4E-11
score: 45.9
NoneNo IPR availablePANTHERPTHR44089FAMILY NOT NAMEDcoord: 1..134
NoneNo IPR availablePANTHERPTHR44089:SF4SUBFAMILY NOT NAMEDcoord: 1..134
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 82..94
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 25..105

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C09G176340Cla004381Watermelon (97103) v1wmwmbB046
Cla97C09G176340MELO3C014359Melon (DHL92) v3.5.1mewmbB414
Cla97C09G176340CSPI06G22430Wild cucumber (PI 183967)cpiwmbB537
Cla97C09G176340Cucsa.184890Cucumber (Gy14) v1cgywmbB340
Cla97C09G176340Lsi03G008450Bottle gourd (USVL1VR-Ls)lsiwmbB246
Cla97C09G176340CsGy6G021670Cucumber (Gy14) v2cgybwmbB486
Cla97C09G176340MELO3C014359.2Melon (DHL92) v3.6.1medwmbB402
Cla97C09G176340CsaV3_6G037530Cucumber (Chinese Long) v3cucwmbB529
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C09G176340Silver-seed gourdcarwmbB0673
Cla97C09G176340Silver-seed gourdcarwmbB0769
Cla97C09G176340Cucumber (Gy14) v1cgywmbB341
Cla97C09G176340Cucumber (Gy14) v1cgywmbB593
Cla97C09G176340Cucurbita maxima (Rimu)cmawmbB157
Cla97C09G176340Cucurbita maxima (Rimu)cmawmbB551
Cla97C09G176340Cucurbita moschata (Rifu)cmowmbB132
Cla97C09G176340Cucurbita moschata (Rifu)cmowmbB532
Cla97C09G176340Cucumber (Chinese Long) v3cucwmbB531
Cla97C09G176340Cucumber (Chinese Long) v2cuwmbB511
Cla97C09G176340Bottle gourd (USVL1VR-Ls)lsiwmbB250
Cla97C09G176340Melon (DHL92) v3.6.1medwmbB405
Cla97C09G176340Melon (DHL92) v3.5.1mewmbB417
Cla97C09G176340Watermelon (Charleston Gray)wcgwmbB035
Cla97C09G176340Wax gourdwgowmbB274