Cla97C09G168040 (gene) Watermelon (97103) v2

Overview
NameCla97C09G168040
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr09 : 4638468 .. 4638770 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA

mRNA sequence

ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA

Coding sequence (CDS)

ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA

Protein sequence

MAAFWQLEEYHYFVERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAATTIDSKEAAERYGGISIIDYRTKKPAAADFRFRI
Homology
[Close]
BLAST of Cla97C09G168040 vs. NCBI nr
Match: KGN44973.1 (hypothetical protein Csa_7G404810 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25
Identity = 66/107 (61.68%), Postives = 77/107 (71.96%), Query Frame = 0 

Query: 1   MAAFWQLEEYHYF-VERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQS 60
           MAAF++ EEYHYF  ERTR    R PQPP PL+KK PY+GEI HL R KN CDHTL F+ 
Sbjct: 1   MAAFFKKEEYHYFSFERTRAITSRSPQPPPPLHKKSPYEGEIQHLRRSKNNCDHTLIFEC 60

Query: 61  SVNSAAA-------TTIDSKEAAERYGGISIIDYRTKKPAAADFRFR 100
           SVNSAAA       TTI+SK+AA+ YGGI+I+D+ TKKPA     FR
Sbjct: 61  SVNSAAAPNVREAKTTINSKQAAQMYGGINIVDFWTKKPATTTGEFR 107

[Close]
BLAST of Cla97C09G168040 vs. TrEMBL
Match: tr|A0A0A0K673|A0A0A0K673_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404810 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-26
Identity = 66/107 (61.68%), Postives = 77/107 (71.96%), Query Frame = 0 

Query: 1   MAAFWQLEEYHYF-VERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQS 60
           MAAF++ EEYHYF  ERTR    R PQPP PL+KK PY+GEI HL R KN CDHTL F+ 
Sbjct: 1   MAAFFKKEEYHYFSFERTRAITSRSPQPPPPLHKKSPYEGEIQHLRRSKNNCDHTLIFEC 60

Query: 61  SVNSAAA-------TTIDSKEAAERYGGISIIDYRTKKPAAADFRFR 100
           SVNSAAA       TTI+SK+AA+ YGGI+I+D+ TKKPA     FR
Sbjct: 61  SVNSAAAPNVREAKTTINSKQAAQMYGGINIVDFWTKKPATTTGEFR 107

The following BLAST results are available for this feature:
BLAST of Cla97C09G168040 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44973.11.3e-2561.68hypothetical protein Csa_7G404810 [Cucumis sativus][more]
BLAST of Cla97C09G168040 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K673|A0A0A0K673_CUCSA8.4e-2661.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404810 PE=4 SV=1[more]
BLAST of Cla97C09G168040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C09G168040 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G168040.1Cla97C09G168040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C09G168040Cla015100Watermelon (97103) v1wmwmbB041
Cla97C09G168040Csa7G404810Cucumber (Chinese Long) v2cuwmbB572
Cla97C09G168040MELO3C015965Melon (DHL92) v3.5.1mewmbB209
Cla97C09G168040ClCG09G005550Watermelon (Charleston Gray)wcgwmbB035
Cla97C09G168040CSPI07G17770Wild cucumber (PI 183967)cpiwmbB598
Cla97C09G168040CmaCh08G004400Cucurbita maxima (Rimu)cmawmbB940
Cla97C09G168040Lsi02G024320Bottle gourd (USVL1VR-Ls)lsiwmbB212
Cla97C09G168040MELO3C015965.2Melon (DHL92) v3.6.1medwmbB194
Cla97C09G168040Bhi09G000755Wax gourdwgowmbB615
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C09G168040Watermelon (97103) v2wmbwmbB062
Cla97C09G168040Silver-seed gourdcarwmbB0117
Cla97C09G168040Silver-seed gourdcarwmbB0590
Cla97C09G168040Silver-seed gourdcarwmbB0852
Cla97C09G168040Cucumber (Gy14) v2cgybwmbB318
Cla97C09G168040Cucumber (Gy14) v2cgybwmbB543
Cla97C09G168040Cucumber (Gy14) v1cgywmbB115
Cla97C09G168040Cucumber (Gy14) v1cgywmbB383
Cla97C09G168040Cucurbita maxima (Rimu)cmawmbB386
Cla97C09G168040Cucurbita moschata (Rifu)cmowmbB369
Cla97C09G168040Cucurbita moschata (Rifu)cmowmbB916
Cla97C09G168040Wild cucumber (PI 183967)cpiwmbB346
Cla97C09G168040Cucumber (Chinese Long) v3cucwmbB343
Cla97C09G168040Cucumber (Chinese Long) v3cucwmbB594
Cla97C09G168040Cucumber (Chinese Long) v2cuwmbB332
Cla97C09G168040Bottle gourd (USVL1VR-Ls)lsiwmbB253
Cla97C09G168040Melon (DHL92) v3.6.1medwmbB501
Cla97C09G168040Melon (DHL92) v3.5.1mewmbB509
Cla97C09G168040Watermelon (Charleston Gray)wcgwmbB056
Cla97C09G168040Watermelon (97103) v1wmwmbB075
Cla97C09G168040Wax gourdwgowmbB050