Cla97C08G150200 (gene) Watermelon (97103) v2

Overview
NameCla97C08G150200
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr08 : 18644962 .. 18645123 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCCATCTCCACCATCTTGTCTTTTCTCTCGTCTTCTCTATCCTTTTTATCTGATCCTTGGCCTGAGGCATTCTATGGTCTCCCTCTCCAAAACTCCGCACAGCCATCGCTCCTCGGGTATGCTATTTTCCACACAGATACTCCAATTGCGTTATAA

mRNA sequence

ATGGCACCCATCTCCACCATCTTGTCTTTTCTCTCGTCTTCTCTATCCTTTTTATCTGATCCTTGGCCTGAGGCATTCTATGGTCTCCCTCTCCAAAACTCCGCACAGCCATCGCTCCTCGGGTATGCTATTTTCCACACAGATACTCCAATTGCGTTATAA

Coding sequence (CDS)

ATGGCACCCATCTCCACCATCTTGTCTTTTCTCTCGTCTTCTCTATCCTTTTTATCTGATCCTTGGCCTGAGGCATTCTATGGTCTCCCTCTCCAAAACTCCGCACAGCCATCGCTCCTCGGGTATGCTATTTTCCACACAGATACTCCAATTGCGTTATAA

Protein sequence

MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAIFHTDTPIAL
Homology
[Close]
BLAST of Cla97C08G150200 vs. NCBI nr
Match: KGN47818.1 (hypothetical protein Csa_6G405315 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.2e-16
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1  MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAIFHTDTPIAL 54
          MAPISTILSFL SSLSFLSDPWPEAFYGLPL++SAQ SL+GYAIFHTDT I L
Sbjct: 25 MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGYAIFHTDTAIVL 77

[Close]
BLAST of Cla97C08G150200 vs. TrEMBL
Match: tr|A0A0A0KE34|A0A0A0KE34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405315 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-16
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 1  MAPISTILSFLSSSLSFLSDPWPEAFYGLPLQNSAQPSLLGYAIFHTDTPIAL 54
          MAPISTILSFL SSLSFLSDPWPEAFYGLPL++SAQ SL+GYAIFHTDT I L
Sbjct: 25 MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGYAIFHTDTAIVL 77

The following BLAST results are available for this feature:
BLAST of Cla97C08G150200 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47818.12.2e-1686.79hypothetical protein Csa_6G405315 [Cucumis sativus][more]
BLAST of Cla97C08G150200 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KE34|A0A0A0KE34_CUCSA1.4e-1686.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405315 PE=4 SV=1[more]
BLAST of Cla97C08G150200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C08G150200 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G150200.1Cla97C08G150200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C08G150200Cla013773Watermelon (97103) v1wmwmbB100
Cla97C08G150200CmaCh15G004570Cucurbita maxima (Rimu)cmawmbB317
Cla97C08G150200CsaV3_6G036390Cucumber (Chinese Long) v3cucwmbB507
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G150200Watermelon (97103) v2wmbwmbB143
Cla97C08G150200Silver-seed gourdcarwmbB0277
Cla97C08G150200Silver-seed gourdcarwmbB0713
Cla97C08G150200Silver-seed gourdcarwmbB0881
Cla97C08G150200Cucumber (Gy14) v2cgybwmbB386
Cla97C08G150200Cucumber (Gy14) v2cgybwmbB465
Cla97C08G150200Cucumber (Gy14) v1cgywmbB231
Cla97C08G150200Cucumber (Gy14) v1cgywmbB535
Cla97C08G150200Cucurbita maxima (Rimu)cmawmbB435
Cla97C08G150200Cucurbita maxima (Rimu)cmawmbB787
Cla97C08G150200Cucurbita maxima (Rimu)cmawmbB788
Cla97C08G150200Cucurbita moschata (Rifu)cmowmbB300
Cla97C08G150200Cucurbita moschata (Rifu)cmowmbB761
Cla97C08G150200Cucurbita moschata (Rifu)cmowmbB762
Cla97C08G150200Wild cucumber (PI 183967)cpiwmbB425
Cla97C08G150200Wild cucumber (PI 183967)cpiwmbB515
Cla97C08G150200Cucumber (Chinese Long) v3cucwmbB421
Cla97C08G150200Cucumber (Chinese Long) v2cuwmbB404
Cla97C08G150200Cucumber (Chinese Long) v2cuwmbB489
Cla97C08G150200Bottle gourd (USVL1VR-Ls)lsiwmbB300
Cla97C08G150200Bottle gourd (USVL1VR-Ls)lsiwmbB448
Cla97C08G150200Melon (DHL92) v3.6.1medwmbB066
Cla97C08G150200Melon (DHL92) v3.6.1medwmbB296
Cla97C08G150200Melon (DHL92) v3.5.1mewmbB071
Cla97C08G150200Melon (DHL92) v3.5.1mewmbB307
Cla97C08G150200Watermelon (Charleston Gray)wcgwmbB244
Cla97C08G150200Watermelon (Charleston Gray)wcgwmbB336
Cla97C08G150200Watermelon (97103) v1wmwmbB223
Cla97C08G150200Wax gourdwgowmbB321
Cla97C08G150200Wax gourdwgowmbB330
Cla97C08G150200Wax gourdwgowmbB541