Cla97C07G130280 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTAGCAACTACTACCTACATCCGCTGCCGTCTCCACCGCAATGACGGCGGCACCGATCAATATCTCGAAATCCGAATGGGGCGATTGCGACGGCTGATCTCCCGAAGACCGTTCGACGGAATACCGTACAAGATCCGCACAGAATCATCCTTGTTTTCGTTGGGGAATGCTACGCTCCCTCTCCCTCTGCGAAAGCTCCAAGATCCGTTGTTCTGCCATTCTTACATCGCTTCCTTTCTCTCCCACTTCAAATTCAGCGCCGTAGCCTCCGATCAAATCGCTCGTAACATCACGTCGTCCGTCGTTGAATTATTGGCCGGCGGAAACTACGACGCGAAGTTCTGCCTTGTGGCAGAAATCAATCACATCCGTCTGTTCTGGCCGGAGAATGAAGAAAACAGAAACGGCGAAGATCCGGCGAGTAAGAGGTTGAAGAAGGAGGAATTTGAAGATGGAGATTGCTCTGTTTGCCTTCAAGAACTGAAGGATGAGGTGTGCAGAATCCTAAAATAA ATGTCTCTAGCAACTACTACCTACATCCGCTGCCGTCTCCACCGCAATGACGGCGGCACCGATCAATATCTCGAAATCCGAATGGGGCGATTGCGACGGCTGATCTCCCGAAGACCGTTCGACGGAATACCGTACAAGATCCGCACAGAATCATCCTTGTTTTCGTTGGGGAATGCTACGCTCCCTCTCCCTCTGCGAAAGCTCCAAGATCCGTTGTTCTGCCATTCTTACATCGCTTCCTTTCTCTCCCACTTCAAATTCAGCGCCGTAGCCTCCGATCAAATCGCTCGTAACATCACGTCGTCCGTCGTTGAATTATTGGCCGGCGGAAACTACGACGCGAAGTTCTGCCTTGTGGCAGAAATCAATCACATCCGTCTGTTCTGGCCGGAGAATGAAGAAAACAGAAACGGCGAAGATCCGGCGAGTAAGAGGTTGAAGAAGGAGGAATTTGAAGATGGAGATTGCTCTGTTTGCCTTCAAGAACTGAAGGATGAGGTGTGCAGAATCCTAAAATAA ATGTCTCTAGCAACTACTACCTACATCCGCTGCCGTCTCCACCGCAATGACGGCGGCACCGATCAATATCTCGAAATCCGAATGGGGCGATTGCGACGGCTGATCTCCCGAAGACCGTTCGACGGAATACCGTACAAGATCCGCACAGAATCATCCTTGTTTTCGTTGGGGAATGCTACGCTCCCTCTCCCTCTGCGAAAGCTCCAAGATCCGTTGTTCTGCCATTCTTACATCGCTTCCTTTCTCTCCCACTTCAAATTCAGCGCCGTAGCCTCCGATCAAATCGCTCGTAACATCACGTCGTCCGTCGTTGAATTATTGGCCGGCGGAAACTACGACGCGAAGTTCTGCCTTGTGGCAGAAATCAATCACATCCGTCTGTTCTGGCCGGAGAATGAAGAAAACAGAAACGGCGAAGATCCGGCGAGTAAGAGGTTGAAGAAGGAGGAATTTGAAGATGGAGATTGCTCTGTTTGCCTTCAAGAACTGAAGGATGAGGTGTGCAGAATCCTAAAATAA MSLATTTYIRCRLHRNDGGTDQYLEIRMGRLRRLISRRPFDGIPYKIRTESSLFSLGNATLPLPLRKLQDPLFCHSYIASFLSHFKFSAVASDQIARNITSSVVELLAGGNYDAKFCLVAEINHIRLFWPENEENRNGEDPASKRLKKEEFEDGDCSVCLQELKDEVCRILK
BLAST of Cla97C07G130280 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.8 bits (338), Expect = 2.8e-28 Identity = 82/200 (41.00%), Postives = 111/200 (55.50%), Query Frame = 0
BLAST of Cla97C07G130280 vs. NCBI nr
Match: XP_023539485.1 (RING-H2 finger protein ATL80-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26 Identity = 81/205 (39.51%), Postives = 111/205 (54.15%), Query Frame = 0
BLAST of Cla97C07G130280 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25 Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 0
BLAST of Cla97C07G130280 vs. NCBI nr
Match: XP_023539483.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 121.3 bits (303), Expect = 3.2e-24 Identity = 78/203 (38.42%), Postives = 110/203 (54.19%), Query Frame = 0
BLAST of Cla97C07G130280 vs. NCBI nr
Match: XP_011652721.1 (PREDICTED: uncharacterized protein LOC105435064 [Cucumis sativus]) HSP 1 Score: 120.6 bits (301), Expect = 5.4e-24 Identity = 77/196 (39.29%), Postives = 104/196 (53.06%), Query Frame = 0
BLAST of Cla97C07G130280 vs. TrEMBL
Match: tr|A0A0A0L2F8|A0A0A0L2F8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036440 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.2e-23 Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 0
BLAST of Cla97C07G130280 vs. TrEMBL
Match: tr|A0A1S4DUZ4|A0A1S4DUZ4_CUCME (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.0e-15 Identity = 72/195 (36.92%), Postives = 98/195 (50.26%), Query Frame = 0
BLAST of Cla97C07G130280 vs. TrEMBL
Match: tr|A0A0A0K696|A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.0e-12 Identity = 63/194 (32.47%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of Cla97C07G130280 vs. TrEMBL
Match: tr|A0A0A0K2W2|A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.0e-12 Identity = 63/194 (32.47%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of Cla97C07G130280 vs. TrEMBL
Match: tr|A0A0A0KYC0|A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05 Identity = 58/177 (32.77%), Postives = 84/177 (47.46%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |