Cla97C07G129120 (gene) Watermelon (97103) v2

Overview
NameCla97C07G129120
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr07 : 845182 .. 845451 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCAAATTTGCTTTCTTGTTAGCCATTTTGCTTCTTCTTGCCAACACTCATCAGCTCCAAAGTTGTAGAACCATGAAAGAGGATCGACAAAAGTGGTCGACGGAGCTACTTCTTCGGCAGTCTCTGCAGAGGGCACCGGTCCCTCCCTCGGCCAAAAACGGTGGCACCAATATCCCGGTACCGGTCGGGCAAAGGGCCTTCGCCGGAAAATCTACAATTGATCATGTACCGGTTCCTTTTGGTGCGGCCTTGAACACAAACTAA

mRNA sequence

ATGAAGATCAAATTTGCTTTCTTGTTAGCCATTTTGCTTCTTCTTGCCAACACTCATCAGCTCCAAAGTTGTAGAACCATGAAAGAGGATCGACAAAAGTGGTCGACGGAGCTACTTCTTCGGCAGTCTCTGCAGAGGGCACCGGTCCCTCCCTCGGCCAAAAACGGTGGCACCAATATCCCGGTACCGGTCGGGCAAAGGGCCTTCGCCGGAAAATCTACAATTGATCATGTACCGGTTCCTTTTGGTGCGGCCTTGAACACAAACTAA

Coding sequence (CDS)

ATGAAGATCAAATTTGCTTTCTTGTTAGCCATTTTGCTTCTTCTTGCCAACACTCATCAGCTCCAAAGTTGTAGAACCATGAAAGAGGATCGACAAAAGTGGTCGACGGAGCTACTTCTTCGGCAGTCTCTGCAGAGGGCACCGGTCCCTCCCTCGGCCAAAAACGGTGGCACCAATATCCCGGTACCGGTCGGGCAAAGGGCCTTCGCCGGAAAATCTACAATTGATCATGTACCGGTTCCTTTTGGTGCGGCCTTGAACACAAACTAA

Protein sequence

MKIKFAFLLAILLLLANTHQLQSCRTMKEDRQKWSTELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTIDHVPVPFGAALNTN
Homology
[Close]
BLAST of Cla97C07G129120 vs. NCBI nr
Match: KGN57926.1 (hypothetical protein Csa_3G393150 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 5.3e-23
Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 1  MKIKFAFLLAILLLLANTHQLQSCRTMKEDRQKWSTEL-LLRQSLQRAPVPPSAKNGGTN 60
          MKI+F+FLLAIL+LLANTH LQSCRT+K+D+Q WS +L LL+QSLQR PVPPSAKNG TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQRAFAGKST 75
          IPVPVGQRAFAGK++
Sbjct: 61 IPVPVGQRAFAGKTS 75

[Close]
BLAST of Cla97C07G129120 vs. TrEMBL
Match: tr|A0A0A0LCY5|A0A0A0LCY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-23
Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 1  MKIKFAFLLAILLLLANTHQLQSCRTMKEDRQKWSTEL-LLRQSLQRAPVPPSAKNGGTN 60
          MKI+F+FLLAIL+LLANTH LQSCRT+K+D+Q WS +L LL+QSLQR PVPPSAKNG TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQRAFAGKST 75
          IPVPVGQRAFAGK++
Sbjct: 61 IPVPVGQRAFAGKTS 75

The following BLAST results are available for this feature:
BLAST of Cla97C07G129120 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57926.15.3e-2378.67hypothetical protein Csa_3G393150 [Cucumis sativus][more]
BLAST of Cla97C07G129120 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCY5|A0A0A0LCY5_CUCSA3.5e-2378.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1[more]
BLAST of Cla97C07G129120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C07G129120 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G129120.1Cla97C07G129120.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33592FAMILY NOT NAMEDcoord: 1..82

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C07G129120Lsi05G009950Bottle gourd (USVL1VR-Ls)lsiwmbB346
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C07G129120Watermelon (97103) v2wmbwmbB141
Cla97C07G129120Watermelon (97103) v2wmbwmbB156
Cla97C07G129120Silver-seed gourdcarwmbB0238
Cla97C07G129120Silver-seed gourdcarwmbB0788
Cla97C07G129120Silver-seed gourdcarwmbB0821
Cla97C07G129120Cucumber (Gy14) v2cgybwmbB148
Cla97C07G129120Cucumber (Gy14) v2cgybwmbB231
Cla97C07G129120Cucurbita maxima (Rimu)cmawmbB273
Cla97C07G129120Cucurbita maxima (Rimu)cmawmbB540
Cla97C07G129120Cucurbita maxima (Rimu)cmawmbB657
Cla97C07G129120Cucurbita maxima (Rimu)cmawmbB927
Cla97C07G129120Cucurbita moschata (Rifu)cmowmbB253
Cla97C07G129120Cucurbita moschata (Rifu)cmowmbB521
Cla97C07G129120Cucurbita moschata (Rifu)cmowmbB631
Cla97C07G129120Wild cucumber (PI 183967)cpiwmbB157
Cla97C07G129120Wild cucumber (PI 183967)cpiwmbB250
Cla97C07G129120Cucumber (Chinese Long) v3cucwmbB155
Cla97C07G129120Cucumber (Chinese Long) v3cucwmbB244
Cla97C07G129120Cucumber (Chinese Long) v2cuwmbB154
Cla97C07G129120Cucumber (Chinese Long) v2cuwmbB241
Cla97C07G129120Bottle gourd (USVL1VR-Ls)lsiwmbB029
Cla97C07G129120Melon (DHL92) v3.6.1medwmbB391
Cla97C07G129120Melon (DHL92) v3.6.1medwmbB445
Cla97C07G129120Melon (DHL92) v3.5.1mewmbB403
Cla97C07G129120Melon (DHL92) v3.5.1mewmbB451
Cla97C07G129120Watermelon (Charleston Gray)wcgwmbB242
Cla97C07G129120Watermelon (Charleston Gray)wcgwmbB275
Cla97C07G129120Watermelon (Charleston Gray)wcgwmbB307
Cla97C07G129120Watermelon (97103) v1wmwmbB175
Cla97C07G129120Watermelon (97103) v1wmwmbB221
Cla97C07G129120Watermelon (97103) v1wmwmbB413
Cla97C07G129120Wax gourdwgowmbB261