Cla97C06G119390 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G119390
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	DUF3511 domain-containing protein
Location	Cla97Chr06 : 18959933 .. 18960268 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATGGAAGGGGTCCACCGTCGTCCAAACAAGGGCGGTCGGAACCTGGAAATCATAGATGTGAGAAAACTAAGTGAAAACAAGATGCATCTAAACCAATCACGTCGTCGAGCTGCCATGGATCCATCGTCAGTGAAACCACGTGTAATCAAAACATTAGAATCCTCGAAAACTTCAACTGAGAAGTTATGGTGGAAGGACCCAGAAATGAAGAGGCGACAACGCGTCGCAAAGTACAAGTTGTATACAGTGGAAGGAAAGGTAAAAGATTCAATAAAGAAAGGGATGAATTGGTTCAAAAGCAGGTGTAAGAGAATCTTGTATGGCTTTTGA

mRNA sequence

ATGACGATGGAAGGGGTCCACCGTCGTCCAAACAAGGGCGGTCGGAACCTGGAAATCATAGATGTGAGAAAACTAAGTGAAAACAAGATGCATCTAAACCAATCACGTCGTCGAGCTGCCATGGATCCATCGTCAGTGAAACCACGTGTAATCAAAACATTAGAATCCTCGAAAACTTCAACTGAGAAGTTATGGTGGAAGGACCCAGAAATGAAGAGGCGACAACGCGTCGCAAAGTACAAGTTGTATACAGTGGAAGGAAAGGTAAAAGATTCAATAAAGAAAGGGATGAATTGGTTCAAAAGCAGGTGTAAGAGAATCTTGTATGGCTTTTGA

Coding sequence (CDS)

ATGACGATGGAAGGGGTCCACCGTCGTCCAAACAAGGGCGGTCGGAACCTGGAAATCATAGATGTGAGAAAACTAAGTGAAAACAAGATGCATCTAAACCAATCACGTCGTCGAGCTGCCATGGATCCATCGTCAGTGAAACCACGTGTAATCAAAACATTAGAATCCTCGAAAACTTCAACTGAGAAGTTATGGTGGAAGGACCCAGAAATGAAGAGGCGACAACGCGTCGCAAAGTACAAGTTGTATACAGTGGAAGGAAAGGTAAAAGATTCAATAAAGAAAGGGATGAATTGGTTCAAAAGCAGGTGTAAGAGAATCTTGTATGGCTTTTGA

Protein sequence

MTMEGVHRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPSSVKPRVIKTLESSKTSTEKLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF

Homology

[Close]

BLAST of Cla97C06G119390 vs. NCBI nr
Match: KGN61447.1 (hypothetical protein Csa_2G123580 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 7.5e-35
Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 3   MEGVHRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPSSVKPRVIKTL-ESSKTST 62
           MEGVHRRPNKG RNL IIDVRKLSENK+HLNQS R++ M+PSSVKPR +KT  ESSKTS 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 63  EKLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
            K W K  E+KRR+RVAKYKLYTVEGKVKDSI+KG+NWFK +  RI+ GF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of Cla97C06G119390 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34
Identity = 78/110 (70.91%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 3   MEGVHRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPS-SVKPRVIKTLESSKTST 62
           MEG+HRRP KGGR+LEIIDVR LSENK+ L+QSR RAA+DPS S K + IK    S  S+
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 63  EKLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
            K WWK+PEMKRR+RVAKYKLYTVEGKVK+SIKKG+ WFK+RC RI+ GF
Sbjct: 61  VKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of Cla97C06G119390 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_3G077700 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 3   MEGVHRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPSSVKPRVIKTLESSKTSTE 62
           MEG+H  PNKGGR+LE+IDVRKLS NK++LNQS+RR  +DPS VK  V KT E SK+  +
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 63  KLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
           K WWK PEM+RRQRVAKYKLY VEGKVK SIKKG+ W K++C RI+ GF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of Cla97C06G119390 vs. NCBI nr
Match: ONI04311.1 (hypothetical protein PRUPE_6G315400 [Prunus persica])

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-13
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 13  GGRNLEIIDVRKLSENK-MHLNQSRRRAAMDPSSVKPRVI--------KTLESSKTSTEK 72
           G RNL++++VR+LSEN+ M++ +S    +  P  +K R          K  +   +   K
Sbjct: 13  GCRNLDMVNVRRLSENRTMYMGRSHLDPSWAPYPMKTRQRDIQLRIGGKKPKERSSKPSK 72

Query: 73  LWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRIL 109
           LWW DPE KRR RVA+YKLY  EGKVK S+KKG  WFK +C  I+
Sbjct: 73  LWWNDPEFKRRGRVARYKLYGAEGKVKRSLKKGYRWFKRKCLEIV 117

[Close]

BLAST of Cla97C06G119390 vs. NCBI nr
Match: PON89516.1 (hypothetical protein TorRG33x02_146600 [Trema orientalis])

HSP 1 Score: 82.8 bits (203), Expect = 8.1e-13
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 4   EGVHRRPNKGGRNLEIIDVRKLSEN-KMHLNQSR-RRAAMDPSSVKPRVIKTLESSKTST 63
           E +  R N  GR++E ++ R LSEN ++++  S     +  PS  K RV+K  +S+ T +
Sbjct: 3   EIIRHRSNGLGRSIETVNARTLSENRRIYVGWSNYPLTSSGPSPSKKRVLKAPKSA-TQS 62

Query: 64  EKLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRIL 109
            K WW DPEMKR++R++KYKLY+ E  VK S KKG+ W + +C  I+
Sbjct: 63  LKWWWNDPEMKRQRRISKYKLYSAEANVKRSFKKGLRWLRKKCSMII 108

[Close]

BLAST of Cla97C06G119390 vs. TrEMBL
Match: tr|A0A0A0LL30|A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.0e-35
Identity = 82/110 (74.55%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 3   MEGVHRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPSSVKPRVIKTL-ESSKTST 62
           MEGVHRRPNKG RNL IIDVRKLSENK+HLNQS R++ M+PSSVKPR +KT  ESSKTS 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 63  EKLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
            K W K  E+KRR+RVAKYKLYTVEGKVKDSI+KG+NWFK +  RI+ GF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of Cla97C06G119390 vs. TrEMBL
Match: tr|A0A0A0L7N5|A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.3e-34
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 3   MEGVHRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPSSVKPRVIKTLESSKTSTE 62
           MEG+H  PNKGGR+LE+IDVRKLS NK++LNQS+RR  +DPS VK  V KT E SK+  +
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 63  KLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
           K WWK PEM+RRQRVAKYKLY VEGKVK SIKKG+ W K++C RI+ GF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of Cla97C06G119390 vs. TrEMBL
Match: tr|A0A2N9IXI1|A0A2N9IXI1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56731 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.7e-16
Identity = 51/103 (49.51%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 7   HRRPNKGGRNLEIIDVRKLSENKMHLNQSRRRAAMDPSSVKPRVIKTLESSKTS--TEKL 66
           +R    GGR+LEI+ VR LSENK+++   R R + DPS       +T  ++K S    K 
Sbjct: 6   YRSYGGGGRDLEIVTVRNLSENKLYVG-GRSRPSFDPSLYHMSKSRTSSTTKPSPLAVKK 65

Query: 67  WWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRI 108
           WW DPE KR++RVAKYKLY  EGK+K SIKKG +W K  C R+
Sbjct: 66  WWNDPERKRKRRVAKYKLYGTEGKLKSSIKKGYHWVKKTCIRM 107

[Close]

BLAST of Cla97C06G119390 vs. TrEMBL
Match: tr|M5W2H8|M5W2H8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G315400 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-13
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 13  GGRNLEIIDVRKLSENK-MHLNQSRRRAAMDPSSVKPRVI--------KTLESSKTSTEK 72
           G RNL++++VR+LSEN+ M++ +S    +  P  +K R          K  +   +   K
Sbjct: 13  GCRNLDMVNVRRLSENRTMYMGRSHLDPSWAPYPMKTRQRDIQLRIGGKKPKERSSKPSK 72

Query: 73  LWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRIL 109
           LWW DPE KRR RVA+YKLY  EGKVK S+KKG  WFK +C  I+
Sbjct: 73  LWWNDPEFKRRGRVARYKLYGAEGKVKRSLKKGYRWFKRKCLEIV 117

[Close]

BLAST of Cla97C06G119390 vs. TrEMBL
Match: tr|A0A2P5EVE2|A0A2P5EVE2_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_146600 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-13
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 4   EGVHRRPNKGGRNLEIIDVRKLSEN-KMHLNQSR-RRAAMDPSSVKPRVIKTLESSKTST 63
           E +  R N  GR++E ++ R LSEN ++++  S     +  PS  K RV+K  +S+ T +
Sbjct: 3   EIIRHRSNGLGRSIETVNARTLSENRRIYVGWSNYPLTSSGPSPSKKRVLKAPKSA-TQS 62

Query: 64  EKLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRIL 109
            K WW DPEMKR++R++KYKLY+ E  VK S KKG+ W + +C  I+
Sbjct: 63  LKWWWNDPEMKRQRRISKYKLYSAEANVKRSFKKGLRWLRKKCSMII 108

[Close]

BLAST of Cla97C06G119390 vs. TAIR10
Match: AT3G05725.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-12
Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 12  KGGRNLEIIDVR--KLSENKMHLNQSRRRAA------MDPSSVKPRVIKTLESSKTST-E 71
           +G RNL++++    KL      + +SRR  +          S K   ++   SS  ST  
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 72  KLWWKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYG 111
           K WW DPE+KR++RVAKYKLY+ EGK+K +++K   W K +C +I++G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of Cla97C06G119390 vs. TAIR10
Match: AT2G47480.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-09
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 68  DPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
           D EMKR++R+A+YK YTVEGKVK ++K G  W K++C +I++ F
Sbjct: 67  DAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of Cla97C06G119390 vs. TAIR10
Match: AT3G62640.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 57.4 bits (137), Expect = 6.6e-09
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 56  SSKTSTEKLWWK--DPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYG 111
           +SKT T    W+  D E KR++R+A YK Y +EGKVK ++KKG +W K R   I++G
Sbjct: 54  TSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of Cla97C06G119390 vs. TAIR10
Match: AT5G11970.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-08
Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 68  DPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRILYGF 112
           DPE++R++RVA YK+Y VEGKVK S +    W K R  +++YG+
Sbjct: 61  DPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

[Close]

BLAST of Cla97C06G119390 vs. TAIR10
Match: AT2G19460.1 (Protein of unknown function (DUF3511))

HSP 1 Score: 52.4 bits (124), Expect = 2.1e-07
Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 0


Query: 55  ESSKTSTEKLW-WKDPEMKRRQRVAKYKLYTVEGKVKDSIKKGMNWFKSRCKRIL 109
           +  ++S+   W + DP+++R++RV  Y+ YTVEGK+K S +K   W K +C ++L
Sbjct: 61  KKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

The following BLAST results are available for this feature:

BLAST of Cla97C06G119390 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61447.1	7.5e-35	74.55	hypothetical protein Csa_2G123580 [Cucumis sativus]	[more]
XP_022151002.1	1.7e-34	70.91	uncharacterized protein LOC111019023 [Momordica charantia]	[more]
KGN56136.1	1.4e-33	67.89	hypothetical protein Csa_3G077700 [Cucumis sativus]	[more]
ONI04311.1	2.1e-13	44.76	hypothetical protein PRUPE_6G315400 [Prunus persica]	[more]
PON89516.1	8.1e-13	42.06	hypothetical protein TorRG33x02_146600 [Trema orientalis]	[more]

BLAST of Cla97C06G119390 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LL30\|A0A0A0LL30_CUCSA	5.0e-35	74.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1	[more]
tr\|A0A0A0L7N5\|A0A0A0L7N5_CUCSA	9.3e-34	67.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1	[more]
tr\|A0A2N9IXI1\|A0A2N9IXI1_FAGSY	6.7e-16	49.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56731 PE=4 SV=1	[more]
tr\|M5W2H8\|M5W2H8_PRUPE	1.4e-13	44.76	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G315400 PE=4 SV=1	[more]
tr\|A0A2P5EVE2\|A0A2P5EVE2_9ROSA	5.3e-13	42.06	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_146600 PE=4 S...	[more]

BLAST of Cla97C06G119390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C06G119390 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05725.1	2.2e-12	37.96	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	1.7e-09	54.55	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	6.6e-09	47.37	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	5.6e-08	50.00	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	2.1e-07	38.18	Protein of unknown function (DUF3511)	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021899	DUF3511

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G119390.1	Cla97C06G119390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 66..110 e-value: 2.9E-22 score: 78.1
None	No IPR available	PANTHER	PTHR33193:SF1	SUBFAMILY NOT NAMED	coord: 27..109
None	No IPR available	PANTHER	PTHR33193	FAMILY NOT NAMED	coord: 27..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G119390	Cla000987	Watermelon (97103) v1	wmwmbB410
Cla97C06G119390	ClCG06G009930	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G119390	Carg19740	Silver-seed gourd	carwmbB0894

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G119390	Silver-seed gourd	carwmbB0775
Cla97C06G119390	Cucumber (Gy14) v2	cgybwmbB139
Cla97C06G119390	Cucumber (Gy14) v1	cgywmbB465
Cla97C06G119390	Cucurbita maxima (Rimu)	cmawmbB312
Cla97C06G119390	Cucurbita moschata (Rifu)	cmowmbB294
Cla97C06G119390	Wild cucumber (PI 183967)	cpiwmbB148
Cla97C06G119390	Cucumber (Chinese Long) v3	cucwmbB146
Cla97C06G119390	Cucumber (Chinese Long) v2	cuwmbB145
Cla97C06G119390	Melon (DHL92) v3.6.1	medwmbB382
Cla97C06G119390	Melon (DHL92) v3.5.1	mewmbB392
Cla97C06G119390	Watermelon (97103) v1	wmwmbB406
Cla97C06G119390	Wax gourd	wgowmbB091