Cla97C06G117280 (gene) Watermelon (97103) v2

NameCla97C06G117280
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionLeguminosin group486 secreted peptide
LocationCla97Chr06 : 8928829 .. 8929241 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCATCATTAGCACTTGTATTCCTAATGTTATTGTTGTTGCCCATTTGCCTGCATGCTACAGATGAATTAATCTCACTTCTACCAGAAACTACGGTCACTATTATCAACGAGGTGGGTGGCCCTCTATTGGGCATTCATTGTAGATCCAAGCAAACAGTTCATATTATAGAGTCAGATAGAAGCTACTCATTTACCTTCAGACCGAGCGTTTGAGGGATGATGTTATTTTACTGTAGCTTGGAATGGATTCAAGGTCAAGTCCACACTACTTCACTATTTACGACTTCAAAAGAGATGCAAAGACTTGCACCAACTGCAAATGGCTCGTTTACGCAAGTGGCCCCTGTTTGCAACACTCTGAAACTTCGATCACTTGTTCTCCTTGGATTAAGAATGCCCTTGAGTGA

mRNA sequence

ATGGCCTCATCATTAGCACTTGTATTCCTAATGTTATTGTTGTTGCCCATTTGCCTGCATGCTACAGATGAATTAATCTCACTTCTACCAGAAACTACGGTCACTATTATCAACGAGGTGGGTGGCCCTCTATTGGGCATTCATTGTAGATCCAAGCAAACAGTTCATATTATAGAGTCAGATAGAAGCTACTCATTTACCTTCAGACCGAGCCTTGGAATGGATTCAAGGTCAAGTCCACACTACTTCACTATTTACGACTTCAAAAGAGATGCAAAGACTTGCACCAACTGCAAATGGCTCGTTTACGCAAGTGGCCCCTGTTTGCAACACTCTGAAACTTCGATCACTTGTTCTCCTTGGATTAAGAATGCCCTTGAGTGA

Coding sequence (CDS)

ATGGCCTCATCATTAGCACTTGTATTCCTAATGTTATTGTTGTTGCCCATTTGCCTGCATGCTACAGATGAATTAATCTCACTTCTACCAGAAACTACGGTCACTATTATCAACGAGGTGGGTGGCCCTCTATTGGGCATTCATTGTAGATCCAAGCAAACAGTTCATATTATAGAGTCAGATAGAAGCTACTCATTTACCTTCAGACCGAGCCTTGGAATGGATTCAAGGTCAAGTCCACACTACTTCACTATTTACGACTTCAAAAGAGATGCAAAGACTTGCACCAACTGCAAATGGCTCGTTTACGCAAGTGGCCCCTGTTTGCAACACTCTGAAACTTCGATCACTTGTTCTCCTTGGATTAAGAATGCCCTTGAGTGA

Protein sequence

MASSLALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQTVHIIESDRSYSFTFRPSLGMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSETSITCSPWIKNALE
BLAST of Cla97C06G117280 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 9.8e-47
Identity = 100/139 (71.94%), Postives = 110/139 (79.14%), Query Frame = 0

Query: 1   MASSLALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHI 60
           M SSLAL F M LLLPI LHATDELISLLPETTVTI+NEVGGPLLGIHCRSKQ    V++
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61  IESDRSYSFTFRPSLGMDS---------RSSPHYFTIYDFKRDAKTCTNCKWLVYASGPC 120
           + SD+SYSF FRP++   +         +  PHYFTIYDFKRD KTCTNC+WLVYASGPC
Sbjct: 61  VSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPC 120

Query: 121 LQHSETSITCSPWIKNALE 128
           LQHSETSITC PW KNA E
Sbjct: 121 LQHSETSITCFPWNKNAPE 139

BLAST of Cla97C06G117280 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 5.4e-45
Identity = 96/135 (71.11%), Postives = 107/135 (79.26%), Query Frame = 0

Query: 5   LALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHIIESD 64
           +AL F M LLLPI LHATDELISLLPETTVTI+NEVGGPLLGIHCRSKQ    V+++ SD
Sbjct: 75  IALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSD 134

Query: 65  RSYSFTFRPSLGMDS---------RSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHS 124
           +SYSF FRP++   +         +  PHYFTIYDFKRD KTCTNC+WLVYASGPCLQHS
Sbjct: 135 KSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHS 194

Query: 125 ETSITCSPWIKNALE 128
           ETSITC PW KNA E
Sbjct: 195 ETSITCFPWNKNAPE 209

BLAST of Cla97C06G117280 vs. NCBI nr
Match: BAT90068.1 (hypothetical protein VIGAN_06124000 [Vigna angularis var. angularis])

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 48/130 (36.92%), Postives = 63/130 (48.46%), Query Frame = 0

Query: 7   LVFLMLLLLPICLHATDELISLLPETTVTIINEV-GGPLLGIHCRSKQT---VHIIESDR 66
           L+ L  +LL  C        +L PETTVT+ N + GGPLL +HC+SK     V  +  + 
Sbjct: 16  LLLLWFMLLSTC-------NALGPETTVTVTNSLEGGPLLFLHCKSKDNDLGVQDLRPNA 75

Query: 67  SYSFTFRPSL--------GMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSET 125
           S+S+ F  +                 H F IYD +RDA  CT C+W+V   GPCL  SE 
Sbjct: 76  SFSWKFGVNFFATTLFHCSFQWERVIHKFVIYDAERDADFCTRCRWIVKHDGPCLILSER 135

BLAST of Cla97C06G117280 vs. NCBI nr
Match: XP_013603996.1 (PREDICTED: uncharacterized protein LOC106311341 [Brassica oleracea var. oleracea])

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09
Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0

Query: 5   LALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHIIESD 64
           L +VFL+++LL      + EL    P+TTVT+IN +GGPLL +HC+SK     +HI+ ++
Sbjct: 7   LCVVFLIMVLL---FGPSHELAPFWPDTTVTVINNLGGPLLTVHCKSKDDDLGIHIVAAN 66

Query: 65  RSYSFTFRPSL--------GMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSE 122
           + Y F+F+P++             +    F I+D  RD        W +  +GPC    +
Sbjct: 67  KDYHFSFQPNVWKTTLFFCSFQWNNQVKRFDIFDATRDEGVGEKFNWTIKPNGPCKLGKK 126

BLAST of Cla97C06G117280 vs. NCBI nr
Match: XP_009111091.1 (PREDICTED: uncharacterized protein LOC103836563 [Brassica rapa])

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 0

Query: 5   LALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHIIESD 64
           L +VFL+++LL      + EL    P+TTV +IN +GGPLL +HC+SK     VH++ ++
Sbjct: 7   LCVVFLIMVLL---FGPSHELAPFWPDTTVIVINNLGGPLLTVHCKSKNDDLGVHMVAAN 66

Query: 65  RSYSFTFRPSL--------GMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSE 122
           + Y F+F+P++        G    +    F I+D  RD        W +   GPC    +
Sbjct: 67  KDYHFSFQPNVWKTTLFFCGFQWNNQFKRFNIFDATRDEGVGEKFNWSIKPDGPCKLGKK 126

BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|B0F817|B0F817_CUCME (Self-incompatibility protein 1 OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.5e-47
Identity = 100/139 (71.94%), Postives = 110/139 (79.14%), Query Frame = 0

Query: 1   MASSLALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHI 60
           M SSLAL F M LLLPI LHATDELISLLPETTVTI+NEVGGPLLGIHCRSKQ    V++
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNV 60

Query: 61  IESDRSYSFTFRPSLGMDS---------RSSPHYFTIYDFKRDAKTCTNCKWLVYASGPC 120
           + SD+SYSF FRP++   +         +  PHYFTIYDFKRD KTCTNC+WLVYASGPC
Sbjct: 61  VSSDKSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPC 120

Query: 121 LQHSETSITCSPWIKNALE 128
           LQHSETSITC PW KNA E
Sbjct: 121 LQHSETSITCFPWNKNAPE 139

BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|B0F818|B0F818_CUCME (Self-incompatibility protein 2 OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 96/135 (71.11%), Postives = 107/135 (79.26%), Query Frame = 0

Query: 5   LALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHIIESD 64
           +AL F M LLLPI LHATDELISLLPETTVTI+NEVGGPLLGIHCRSKQ    V+++ SD
Sbjct: 75  IALGFSMFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSD 134

Query: 65  RSYSFTFRPSLGMDS---------RSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHS 124
           +SYSF FRP++   +         +  PHYFTIYDFKRD KTCTNC+WLVYASGPCLQHS
Sbjct: 135 KSYSFNFRPNVWGTTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHS 194

Query: 125 ETSITCSPWIKNALE 128
           ETSITC PW KNA E
Sbjct: 195 ETSITCFPWNKNAPE 209

BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|A0A0S3SB27|A0A0S3SB27_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G124000 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-09
Identity = 48/130 (36.92%), Postives = 63/130 (48.46%), Query Frame = 0

Query: 7   LVFLMLLLLPICLHATDELISLLPETTVTIINEV-GGPLLGIHCRSKQT---VHIIESDR 66
           L+ L  +LL  C        +L PETTVT+ N + GGPLL +HC+SK     V  +  + 
Sbjct: 16  LLLLWFMLLSTC-------NALGPETTVTVTNSLEGGPLLFLHCKSKDNDLGVQDLRPNA 75

Query: 67  SYSFTFRPSL--------GMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSET 125
           S+S+ F  +                 H F IYD +RDA  CT C+W+V   GPCL  SE 
Sbjct: 76  SFSWKFGVNFFATTLFHCSFQWERVIHKFVIYDAERDADFCTRCRWIVKHDGPCLILSER 135

BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|A0A0D3DIV6|A0A0D3DIV6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 GN=106311341 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0

Query: 5   LALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQT---VHIIESD 64
           L +VFL+++LL      + EL    P+TTVT+IN +GGPLL +HC+SK     +HI+ ++
Sbjct: 7   LCVVFLIMVLL---FGPSHELAPFWPDTTVTVINNLGGPLLTVHCKSKDDDLGIHIVAAN 66

Query: 65  RSYSFTFRPSL--------GMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSE 122
           + Y F+F+P++             +    F I+D  RD        W +  +GPC    +
Sbjct: 67  KDYHFSFQPNVWKTTLFFCSFQWNNQVKRFDIFDATRDEGVGEKFNWTIKPNGPCKLGKK 126

BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|A0A178W3U9|A0A178W3U9_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At1g03980 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0

Query: 32  TTVTIINEVGGPLLGIHCRSKQT---VHIIESDRSYSFTFRPSLGMDS--------RSSP 91
           T VT+ N +GGP L IHC+SKQ    +H++   + Y F F+P+L   +         S  
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 92  HYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSETSITCSPW 122
             F IYD +RD   C +C+W +   GPC    +    C PW
Sbjct: 89  KSFDIYDAQRDQGICDDCQWEIKPDGPCRLGKKAK--CFPW 127

BLAST of Cla97C06G117280 vs. Swiss-Prot
Match: sp|O23020|SPH5_ARATH (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0

Query: 32  TTVTIINEVGGPLLGIHCRSKQT---VHIIESDRSYSFTFRPSLGMDS--------RSSP 91
           T VT+ N +GGP L IHC+SKQ    +H++   + Y F F+P+L   +         S  
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 92  HYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSETSITCSPW 122
             F IYD +RD   C +C+W +   GPC    +    C PW
Sbjct: 89  KSFDIYDAQRDQGICDDCQWEIKPDGPCRLGKKAK--CFPW 127

BLAST of Cla97C06G117280 vs. TAIR10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.8 bits (164), Expect = 5.6e-12
Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0

Query: 32  TTVTIINEVGGPLLGIHCRSKQT---VHIIESDRSYSFTFRPSLGMDS--------RSSP 91
           T VT+ N +GGP L IHC+SKQ    +H++   + Y F F+P+L   +         S  
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 92  HYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSETSITCSPW 122
             F IYD +RD   C +C+W +   GPC    +    C PW
Sbjct: 89  KSFDIYDAQRDQGICDDCQWEIKPDGPCRLGKKAK--CFPW 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ABY56091.19.8e-4771.94self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility p... [more]
ABY56092.15.4e-4571.11self-incompatibility protein 2 [Cucumis melo][more]
BAT90068.12.1e-0936.92hypothetical protein VIGAN_06124000 [Vigna angularis var. angularis][more]
XP_013603996.13.6e-0932.81PREDICTED: uncharacterized protein LOC106311341 [Brassica oleracea var. oleracea... [more]
XP_009111091.11.4e-0832.81PREDICTED: uncharacterized protein LOC103836563 [Brassica rapa][more]
Match NameE-valueIdentityDescription
tr|B0F817|B0F817_CUCME6.5e-4771.94Self-incompatibility protein 1 OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|B0F818|B0F818_CUCME3.5e-4571.11Self-incompatibility protein 2 OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|A0A0S3SB27|A0A0S3SB27_PHAAN1.4e-0936.92Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G... [more]
tr|A0A0D3DIV6|A0A0D3DIV6_BRAOL2.4e-0932.81Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 GN=10631134... [more]
tr|A0A178W3U9|A0A178W3U9_ARATH2.0e-0835.64Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At1g03980 PE=4 ... [more]
Match NameE-valueIdentityDescription
sp|O23020|SPH5_ARATH1.0e-1035.64S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT1G04645.15.6e-1235.64Plant self-incompatibility protein S1 family[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G117280.1Cla97C06G117280.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05938Self-incomp_S1coord: 33..121
e-value: 3.0E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR31232:SF10SELF-INCOMPATIBILITY S1 FAMILY PROTEINcoord: 6..123
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 6..123

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G117280ClCG06G007550Watermelon (Charleston Gray)wcgwmbB273
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G117280Watermelon (97103) v2wmbwmbB137
Cla97C06G117280Watermelon (97103) v2wmbwmbB156
Cla97C06G117280Silver-seed gourdcarwmbB0230
Cla97C06G117280Silver-seed gourdcarwmbB0237
Cla97C06G117280Silver-seed gourdcarwmbB0819
Cla97C06G117280Silver-seed gourdcarwmbB1009
Cla97C06G117280Silver-seed gourdcarwmbB1133
Cla97C06G117280Cucumber (Gy14) v2cgybwmbB141
Cla97C06G117280Cucumber (Gy14) v2cgybwmbB219
Cla97C06G117280Cucumber (Gy14) v2cgybwmbB222
Cla97C06G117280Cucumber (Gy14) v1cgywmbB453
Cla97C06G117280Cucurbita maxima (Rimu)cmawmbB266
Cla97C06G117280Cucurbita maxima (Rimu)cmawmbB377
Cla97C06G117280Cucurbita maxima (Rimu)cmawmbB539
Cla97C06G117280Cucurbita maxima (Rimu)cmawmbB653
Cla97C06G117280Cucurbita maxima (Rimu)cmawmbB865
Cla97C06G117280Cucurbita maxima (Rimu)cmawmbB921
Cla97C06G117280Cucurbita moschata (Rifu)cmowmbB246
Cla97C06G117280Cucurbita moschata (Rifu)cmowmbB361
Cla97C06G117280Cucurbita moschata (Rifu)cmowmbB520
Cla97C06G117280Cucurbita moschata (Rifu)cmowmbB627
Cla97C06G117280Cucurbita moschata (Rifu)cmowmbB837
Cla97C06G117280Cucurbita moschata (Rifu)cmowmbB896
Cla97C06G117280Wild cucumber (PI 183967)cpiwmbB149
Cla97C06G117280Wild cucumber (PI 183967)cpiwmbB235
Cla97C06G117280Wild cucumber (PI 183967)cpiwmbB239
Cla97C06G117280Cucumber (Chinese Long) v3cucwmbB148
Cla97C06G117280Cucumber (Chinese Long) v3cucwmbB230
Cla97C06G117280Cucumber (Chinese Long) v3cucwmbB233
Cla97C06G117280Cucumber (Chinese Long) v2cuwmbB147
Cla97C06G117280Cucumber (Chinese Long) v2cuwmbB228
Cla97C06G117280Cucumber (Chinese Long) v2cuwmbB231
Cla97C06G117280Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G117280Bottle gourd (USVL1VR-Ls)lsiwmbB341
Cla97C06G117280Melon (DHL92) v3.6.1medwmbB378
Cla97C06G117280Melon (DHL92) v3.6.1medwmbB442
Cla97C06G117280Melon (DHL92) v3.5.1mewmbB388
Cla97C06G117280Melon (DHL92) v3.5.1mewmbB448
Cla97C06G117280Watermelon (Charleston Gray)wcgwmbB237
Cla97C06G117280Watermelon (Charleston Gray)wcgwmbB305
Cla97C06G117280Watermelon (97103) v1wmwmbB217
Cla97C06G117280Watermelon (97103) v1wmwmbB406
Cla97C06G117280Wax gourdwgowmbB095
Cla97C06G117280Wax gourdwgowmbB097