Cla97C06G117280 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCATCATTAGCACTTGTATTCCTAATGTTATTGTTGTTGCCCATTTGCCTGCATGCTACAGATGAATTAATCTCACTTCTACCAGAAACTACGGTCACTATTATCAACGAGGTGGGTGGCCCTCTATTGGGCATTCATTGTAGATCCAAGCAAACAGTTCATATTATAGAGTCAGATAGAAGCTACTCATTTACCTTCAGACCGAGCGTTTGAGGGATGATGTTATTTTACTGTAGCTTGGAATGGATTCAAGGTCAAGTCCACACTACTTCACTATTTACGACTTCAAAAGAGATGCAAAGACTTGCACCAACTGCAAATGGCTCGTTTACGCAAGTGGCCCCTGTTTGCAACACTCTGAAACTTCGATCACTTGTTCTCCTTGGATTAAGAATGCCCTTGAGTGA ATGGCCTCATCATTAGCACTTGTATTCCTAATGTTATTGTTGTTGCCCATTTGCCTGCATGCTACAGATGAATTAATCTCACTTCTACCAGAAACTACGGTCACTATTATCAACGAGGTGGGTGGCCCTCTATTGGGCATTCATTGTAGATCCAAGCAAACAGTTCATATTATAGAGTCAGATAGAAGCTACTCATTTACCTTCAGACCGAGCCTTGGAATGGATTCAAGGTCAAGTCCACACTACTTCACTATTTACGACTTCAAAAGAGATGCAAAGACTTGCACCAACTGCAAATGGCTCGTTTACGCAAGTGGCCCCTGTTTGCAACACTCTGAAACTTCGATCACTTGTTCTCCTTGGATTAAGAATGCCCTTGAGTGA ATGGCCTCATCATTAGCACTTGTATTCCTAATGTTATTGTTGTTGCCCATTTGCCTGCATGCTACAGATGAATTAATCTCACTTCTACCAGAAACTACGGTCACTATTATCAACGAGGTGGGTGGCCCTCTATTGGGCATTCATTGTAGATCCAAGCAAACAGTTCATATTATAGAGTCAGATAGAAGCTACTCATTTACCTTCAGACCGAGCCTTGGAATGGATTCAAGGTCAAGTCCACACTACTTCACTATTTACGACTTCAAAAGAGATGCAAAGACTTGCACCAACTGCAAATGGCTCGTTTACGCAAGTGGCCCCTGTTTGCAACACTCTGAAACTTCGATCACTTGTTCTCCTTGGATTAAGAATGCCCTTGAGTGA MASSLALVFLMLLLLPICLHATDELISLLPETTVTIINEVGGPLLGIHCRSKQTVHIIESDRSYSFTFRPSLGMDSRSSPHYFTIYDFKRDAKTCTNCKWLVYASGPCLQHSETSITCSPWIKNALE
BLAST of Cla97C06G117280 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo]) HSP 1 Score: 195.7 bits (496), Expect = 9.8e-47 Identity = 100/139 (71.94%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of Cla97C06G117280 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo]) HSP 1 Score: 189.9 bits (481), Expect = 5.4e-45 Identity = 96/135 (71.11%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Cla97C06G117280 vs. NCBI nr
Match: BAT90068.1 (hypothetical protein VIGAN_06124000 [Vigna angularis var. angularis]) HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09 Identity = 48/130 (36.92%), Postives = 63/130 (48.46%), Query Frame = 0
BLAST of Cla97C06G117280 vs. NCBI nr
Match: XP_013603996.1 (PREDICTED: uncharacterized protein LOC106311341 [Brassica oleracea var. oleracea]) HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09 Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0
BLAST of Cla97C06G117280 vs. NCBI nr
Match: XP_009111091.1 (PREDICTED: uncharacterized protein LOC103836563 [Brassica rapa]) HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08 Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|B0F817|B0F817_CUCME (Self-incompatibility protein 1 OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 6.5e-47 Identity = 100/139 (71.94%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|B0F818|B0F818_CUCME (Self-incompatibility protein 2 OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45 Identity = 96/135 (71.11%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|A0A0S3SB27|A0A0S3SB27_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G124000 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-09 Identity = 48/130 (36.92%), Postives = 63/130 (48.46%), Query Frame = 0
BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|A0A0D3DIV6|A0A0D3DIV6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 GN=106311341 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09 Identity = 42/128 (32.81%), Postives = 67/128 (52.34%), Query Frame = 0
BLAST of Cla97C06G117280 vs. TrEMBL
Match: tr|A0A178W3U9|A0A178W3U9_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At1g03980 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08 Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of Cla97C06G117280 vs. Swiss-Prot
Match: sp|O23020|SPH5_ARATH (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10 Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of Cla97C06G117280 vs. TAIR10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family) HSP 1 Score: 67.8 bits (164), Expect = 5.6e-12 Identity = 36/101 (35.64%), Postives = 51/101 (50.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |