Cla97C06G109630 (gene) Watermelon (97103) v2

Overview
NameCla97C06G109630
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionCornichon family protein
LocationCla97Chr06 : 353395 .. 355363 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGACCTCTTTGCTTGGCTCTTCAACTTATTCCTCCTCATATTTCTCATTGCCATTCTCGGCTATCAGGTTCTTTCTCTATTCCATCTCTCGCCAATGGCTTGCAATTTTTTTGTGCCATCTTTCATTCTCGTTGTTGAATGATTTTCTGCTGAAACTGTAGGTTTGCACTTCCGATTAATAGTTTAATTATAGATGAATGTCGAACTTCCGACTCCTTTCTTTTCTTGAAATAGAGGAAGTTTACAGAGAGATAGTAGTAACAAAATGTGTGTGAACGAAGATTGCAAGAAGTAATATGTCGAACAAGATTATTCAAGCTGTATCAAAATTGTCTCTGCAAAAAAGTCCGTTATAAGGGCTTTTCTTGCTGCTTTAATTACACAACTTAAAGCGTATTCATGCAAATCTTTTCTGGTTGCTTTTAACTGTTTATGTTTGCATGATTAGAAATCTGCCTAACAAAACGAAACAAAAAAAATCATGATTTGAGTTACTGCTGTGCTGCAGATTATATGCTTGGTGGATTTGGAGTCTGACTATATCAATCTCTTCGATTCGACATCTCGGATGAACAGAGTTATAATGTTGGAATTTATTGCCCAGGCAGTTTTCAGCTTTGTTCATCTTCCAGCACCCATTGGTTCATGTTTTTGGTGTCACTTCCATGCCTATTCTTCAATGTCAGACTGTAGGTTCTGGTTTCCTGAATCCATTAACTCTACTGAACAACATTATTTTACTATAGGTCTCTGGGATCATTATTGAAGGATGGTACATGAAATTCAACTGGCTATGAAAGCTTGATATTTCAAAAACGGATTTTCTCGTCCAACTGACCATGGTTTGTTTGGTAGTGATTTTACATTGAGTTTGAAAAATGTTGTTTAGAGGTTTGAAAGTTATATGCCTTTTATATGCTTGACATTTCAGAATAAGTTGATTTTGAGGGACAGAAGCTAAACTGGCTTGAATATTGTAAATTCGTAGTTGATTGGTTAGTCCCCGATATAGCATATGGAAAAGATCTGCCTTAGGAAGAAATATAATGTAGAACTAAATGAACTATTTTCTTCCCAATAAAGACAGTTGAGTGGATTCTAAACATCTGATTTGTTTGAGAGGTAATTGATTTCTATTTCATGATCTGATGGGCTGATTACAATTTGGTTTGTATTTTCTAAGAGAACCCAGTAATTGTAAAGAAAAGCCTAGTGTAGTTTTTGGACAATAGTAATTTGGTTTCAAACTTCTATCTTTTGAGTTGGTCTAGTTACTTATTGGATCATGTGATAAATAAAAGGAACCTTTGGGAGAATGGGCTTGAACTCCGTGGTAGTCACCTAGTTGGGATATTGAAATTCTAATTCCTTCGAGAGAATGACAACCAAATATTAGATTGTTGAGGATTCCACGTTAGAAAATTCAAGGGACTTCTTCTTGTTGCCGGATGGTTCTAAGATAGACTCCATGTTATCTAATATACATAAAAATTGTTCTCTTTCAACTTTGCTTGAGCACATTTGAATTCTGTACTCATGAATTTCCTTGATCTAACACAGTCATAAGGCTCGGTCTTTTAAATTCTAAATCTTGGCCTTGCCTTAATTCCATGGTGCGAAATACAAATAAATGCAACTTGACAACAGAGATTAAATCACTTGGAAGGATTCTTACTTGAGTGGAATTTGTAACTCCATTATTTTCAGGTATATTTGGAAAGAACACCTTGCAGATGTGACTGAGATCTATAACCAGATTGGCTGCGAGAAAAAGCAACGCTTTCTTAAGATGATTTATTTTCTTATACTATTTGTTATGGTACATACATATACTGATACTTTTGACATTTATGATGCTGATTTTATGTTCATTATAATCTATAAATTGTGTAACAATATTTATTACTTGAATTTGTTTGCAGGATGATTTGGAGCGTAGGAACTTTGGAGAAGAACTGGGATAG

mRNA sequence

ATGGGAGACCTCTTTGCTTGGCTCTTCAACTTATTCCTCCTCATATTTCTCATTGCCATTCTCGGCTATCAGATTATATGCTTGGTGGATTTGGAGTCTGACTATATCAATCTCTTCGATTCGACATCTCGGATGAACAGAGTTATAATGTTGGAATTTATTGCCCAGGCAGTTTTCAGCTTTGTTCATCTTCCAGCACCCATTGGTTCATGTTTTTGGTGTCACTTCCATGCCTATTCTTCAATGTCAGACTGTAGGTATATTTGGAAAGAACACCTTGCAGATGTGACTGAGATCTATAACCAGATTGGCTGCGAGAAAAAGCAACGCTTTCTTAAGATGATTTATTTTCTTATACTATTTGTTATGGATGATTTGGAGCGTAGGAACTTTGGAGAAGAACTGGGATAG

Coding sequence (CDS)

ATGGGAGACCTCTTTGCTTGGCTCTTCAACTTATTCCTCCTCATATTTCTCATTGCCATTCTCGGCTATCAGATTATATGCTTGGTGGATTTGGAGTCTGACTATATCAATCTCTTCGATTCGACATCTCGGATGAACAGAGTTATAATGTTGGAATTTATTGCCCAGGCAGTTTTCAGCTTTGTTCATCTTCCAGCACCCATTGGTTCATGTTTTTGGTGTCACTTCCATGCCTATTCTTCAATGTCAGACTGTAGGTATATTTGGAAAGAACACCTTGCAGATGTGACTGAGATCTATAACCAGATTGGCTGCGAGAAAAAGCAACGCTTTCTTAAGATGATTTATTTTCTTATACTATTTGTTATGGATGATTTGGAGCGTAGGAACTTTGGAGAAGAACTGGGATAG

Protein sequence

MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVHLPAPIGSCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLILFVMDDLERRNFGEELG
Homology
[Close]
BLAST of Cla97C06G109630 vs. NCBI nr
Match: XP_008460127.1 (PREDICTED: protein cornichon homolog 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 4.4e-37
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]
BLAST of Cla97C06G109630 vs. NCBI nr
Match: XP_008460129.1 (PREDICTED: protein cornichon homolog 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 4.4e-37
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]
BLAST of Cla97C06G109630 vs. NCBI nr
Match: XP_022152825.1 (protein cornichon homolog 4-like isoform X1 [Momordica charantia] >XP_022152831.1 protein cornichon homolog 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35
Identity = 86/126 (68.25%), Postives = 98/126 (77.78%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNLF+LIFL+ ILGYQ ICLVDLESDYINLFDSTSR+NRV++LEF+AQAVF 
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       Y+ KEHLADVTEIYNQIG EKKQRF+KM
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRFVKM 119

[Close]
BLAST of Cla97C06G109630 vs. NCBI nr
Match: XP_022152838.1 (protein cornichon homolog 4-like isoform X2 [Momordica charantia] >XP_022152841.1 protein cornichon homolog 4-like isoform X2 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 6.2e-31
Identity = 79/121 (65.29%), Postives = 90/121 (74.38%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNLF+LIFL+ ILGYQ ICLVDLESDYINLFDSTSR+NRV++LEF+AQAVF 
Sbjct: 1   MGDLFAWLFNLFILIFLLLILGYQNICLVDLESDYINLFDSTSRINRVVLLEFVAQAVFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 116
           FVHL A        H+  +     C       Y+ KEHLADVTEIYNQIG EKKQR +  
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLCFNIRLYVRKEHLADVTEIYNQIGWEKKQRMISS 114

[Close]
BLAST of Cla97C06G109630 vs. NCBI nr
Match: XP_008375821.1 (PREDICTED: protein cornichon homolog 4-like [Malus domestica])

HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20
Identity = 61/121 (50.41%), Postives = 83/121 (68.60%), Query Frame = 0 

Query: 4   LFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVH 63
           L+ WL + F ++ L+ ILGYQ++CLVDLE DYIN +DS+SR+N VI+ EFI Q V  F+ 
Sbjct: 4   LWTWLLSFFFILALLCILGYQLVCLVDLEYDYINPYDSSSRINNVILPEFIIQGVLCFIL 63

Query: 64  LPAPIG-SCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLILFV 123
           L A      F    H Y +++   Y+ + HL DVTEIYNQ+  EKKQRFLK+ Y L+LF+
Sbjct: 64  LIARHWFMLFMALPHLYYNVN--LYMTRRHLVDVTEIYNQLSWEKKQRFLKIGYLLVLFI 122

[Close]
BLAST of Cla97C06G109630 vs. TrEMBL
Match: tr|A0A1S3CD35|A0A1S3CD35_CUCME (protein cornichon homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499030 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-37
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]
BLAST of Cla97C06G109630 vs. TrEMBL
Match: tr|A0A1S3CBU0|A0A1S3CBU0_CUCME (protein cornichon homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499030 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-37
Identity = 91/126 (72.22%), Postives = 97/126 (76.98%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDLFAWLFNL LLIFLI ILGYQIICLVDLESDYINLFDSTSR+NRV+MLEFI Q VFS
Sbjct: 1   MGDLFAWLFNLLLLIFLIVILGYQIICLVDLESDYINLFDSTSRINRVVMLEFITQGVFS 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           FVHL A        H+  +     C       YI KEHLADVTEIYN IGCEKKQRFLK+
Sbjct: 61  FVHLLAR-------HWFMFLVSLPCLYFNVRLYIRKEHLADVTEIYNHIGCEKKQRFLKI 119

[Close]
BLAST of Cla97C06G109630 vs. TrEMBL
Match: tr|A0A2R6QPK5|A0A2R6QPK5_ACTCH (Protein cornichon like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16094 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-19
Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           M DLFAWL + FLLI ++ I+ YQ++CL DLE DYIN +DS SR+N+ ++ EF+ Q    
Sbjct: 1   MADLFAWLLSFFLLIAIVGIILYQLMCLADLEFDYINPYDSASRINKAVIPEFVTQGSLC 60

Query: 61  FVHLPAPIGSCF-WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLI 120
            +HL       F +C  H+Y + +   Y  K HL DVTEI+NQ+  EKKQR  K++Y + 
Sbjct: 61  LLHLVTGHWFMFLFCVPHSYYNFT--LYTKKRHLVDVTEIFNQLPWEKKQRIYKLVYLVF 119

[Close]
BLAST of Cla97C06G109630 vs. TrEMBL
Match: tr|A0A1S2XPU5|A0A1S2XPU5_CICAR (protein cornichon homolog 4-like OS=Cicer arietinum OX=3827 GN=LOC101499761 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           M ++F W+ +  L++ L+ +LGYQ+I LVDLE DYIN +DSTSR+N+VI+ EF+ Q +F 
Sbjct: 1   MAEVFYWILSFVLILTLLCLLGYQLILLVDLEFDYINPYDSTSRVNQVILPEFLMQGIFC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDC------RYIWKEHLADVTEIYNQIGCEKKQRFLKM 120
           F++L A        H+  +     C       YI +EH ADVTEIYN++  EKK+R  K+
Sbjct: 61  FINLIAG-------HWFIFLISLPCLYFNVRLYIKREHFADVTEIYNKLNWEKKKRLFKV 120

Query: 121 IYFLILFVMDDL 127
            + +++FV+  L
Sbjct: 121 GHLIVIFVLSIL 125

[Close]
BLAST of Cla97C06G109630 vs. TrEMBL
Match: tr|M5XE40|M5XE40_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G146000 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 57/121 (47.11%), Postives = 81/121 (66.94%), Query Frame = 0 

Query: 4   LFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVH 63
           L+ WL + F ++ L+ ILGYQ++CLVDLE DYIN +DS+SR+N VI+ EFI Q V   + 
Sbjct: 4   LWTWLLSFFFILALLCILGYQLVCLVDLEFDYINPYDSSSRINNVILPEFIIQGVLCLIL 63

Query: 64  LPAPIGSCFWCHF-HAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLILFV 123
           L A           H Y +++   Y+ ++HL DVTEIYNQ+  EKK+RF K+ Y L+LF+
Sbjct: 64  LIARHWFMLLLALPHLYYNVN--LYMTRQHLVDVTEIYNQLSWEKKKRFFKIGYLLVLFI 122

[Close]
BLAST of Cla97C06G109630 vs. Swiss-Prot
Match: sp|Q84W04|CNIH4_ARATH (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.1e-18
Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGD++ WL + F LI L+ I+ YQ++CL DLE DYIN +DS SR+N V++ EFI Q V  
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         ++HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLLT--GHWFMTLLCLPYLYYNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRL 118

[Close]
BLAST of Cla97C06G109630 vs. Swiss-Prot
Match: sp|Q9C7D7|CNIH1_ARATH (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.9e-14
Identity = 47/133 (35.34%), Postives = 77/133 (57.89%), Query Frame = 0 

Query: 3   DLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQA----- 62
           DLF W+ + F+ + L+A + YQ+ICL DLE+DY+N F++++R+NR+++ EFI Q      
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  -------VFSFVHLPAPIGSCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQR 122
                  VF  V +P  +       +HA        Y  + +L DVTE++  I  EKK R
Sbjct: 64  FLLTWHWVFFLVAVPVTV-------YHA------MLYKERRYLIDVTEVFRGISFEKKLR 123

Query: 123 FLKMIYFLILFVM 124
           + K+ +++ LF+M
Sbjct: 124 YTKLGFYVFLFIM 123

[Close]
BLAST of Cla97C06G109630 vs. Swiss-Prot
Match: sp|Q8GWT5|CNIH3_ARATH (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MG+++ W+ +  +LI L+ ++ YQ+I L DLE DYIN +DS SR+N V++ E I Q    
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         K+HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLVT--GHWFMALLCVPYLYYNFHLYSR--------KQHLIDVTEIFNLLDWEKKKRL 118

[Close]
BLAST of Cla97C06G109630 vs. Swiss-Prot
Match: sp|Q3EDD7|CNIH2_ARATH (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-12
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 23  YQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVHLPAPIGSCF---------W 82
           + ++CL DLE DYIN +DS SR+N V++ EFI Q V    +L    G  F         +
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT--GHWFMTLLCLPYLY 74

Query: 83  CHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLI 120
            +FH YS         ++HL DVTEI+N +  EKK+R  K+ Y ++
Sbjct: 75  YNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 110

[Close]
BLAST of Cla97C06G109630 vs. Swiss-Prot
Match: sp|Q9SZ74|CNIH5_ARATH (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 4.8e-11
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDL  W+ +   L  LI I+ YQ+ CL DLE D IN +D +SR+NR+++ EF  Q +  
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDCR-YIWKEHLADVTEIYNQIGCEKKQRFLKM 115
             ++    G  F           + R Y+ +EHLADVTE+YN    E+K+R  K+
Sbjct: 61  LYYILT--GHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 113

[Close]
BLAST of Cla97C06G109630 vs. TAIR10
Match: AT1G12390.1 (Cornichon family protein)

HSP 1 Score: 91.3 bits (225), Expect = 5.0e-19
Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGD++ WL + F LI L+ I+ YQ++CL DLE DYIN +DS SR+N V++ EFI Q V  
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         ++HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLLT--GHWFMTLLCLPYLYYNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRL 118

[Close]
BLAST of Cla97C06G109630 vs. TAIR10
Match: AT3G12180.1 (Cornichon family protein)

HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15
Identity = 47/133 (35.34%), Postives = 77/133 (57.89%), Query Frame = 0 

Query: 3   DLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQA----- 62
           DLF W+ + F+ + L+A + YQ+ICL DLE+DY+N F++++R+NR+++ EFI Q      
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  -------VFSFVHLPAPIGSCFWCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQR 122
                  VF  V +P  +       +HA        Y  + +L DVTE++  I  EKK R
Sbjct: 64  FLLTWHWVFFLVAVPVTV-------YHA------MLYKERRYLIDVTEVFRGISFEKKLR 123

Query: 123 FLKMIYFLILFVM 124
           + K+ +++ LF+M
Sbjct: 124 YTKLGFYVFLFIM 123

[Close]
BLAST of Cla97C06G109630 vs. TAIR10
Match: AT1G62880.1 (Cornichon family protein)

HSP 1 Score: 77.0 bits (188), Expect = 9.8e-15
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MG+++ W+ +  +LI L+ ++ YQ+I L DLE DYIN +DS SR+N V++ E I Q    
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FVHLPAPIGSCF---------WCHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRF 120
             +L    G  F         + +FH YS         K+HL DVTEI+N +  EKK+R 
Sbjct: 61  VFYLVT--GHWFMALLCVPYLYYNFHLYSR--------KQHLIDVTEIFNLLDWEKKKRL 118

[Close]
BLAST of Cla97C06G109630 vs. TAIR10
Match: AT1G12340.1 (Cornichon family protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.4e-13
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 23  YQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFSFVHLPAPIGSCF---------W 82
           + ++CL DLE DYIN +DS SR+N V++ EFI Q V    +L    G  F         +
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT--GHWFMTLLCLPYLY 74

Query: 83  CHFHAYSSMSDCRYIWKEHLADVTEIYNQIGCEKKQRFLKMIYFLI 120
            +FH YS         ++HL DVTEI+N +  EKK+R  K+ Y ++
Sbjct: 75  YNFHLYSK--------RQHLVDVTEIFNLLNWEKKKRLFKLAYIVL 110

[Close]
BLAST of Cla97C06G109630 vs. TAIR10
Match: AT4G12090.1 (Cornichon family protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-12
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0 

Query: 1   MGDLFAWLFNLFLLIFLIAILGYQIICLVDLESDYINLFDSTSRMNRVIMLEFIAQAVFS 60
           MGDL  W+ +   L  LI I+ YQ+ CL DLE D IN +D +SR+NR+++ EF  Q +  
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FVHLPAPIGSCFWCHFHAYSSMSDCR-YIWKEHLADVTEIYNQIGCEKKQRFLKM 115
             ++    G  F           + R Y+ +EHLADVTE+YN    E+K+R  K+
Sbjct: 61  LYYILT--GHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 113

The following BLAST results are available for this feature:
BLAST of Cla97C06G109630 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460127.14.4e-3772.22PREDICTED: protein cornichon homolog 4-like isoform X1 [Cucumis melo][more]
XP_008460129.14.4e-3772.22PREDICTED: protein cornichon homolog 4-like isoform X2 [Cucumis melo][more]
XP_022152825.12.4e-3568.25protein cornichon homolog 4-like isoform X1 [Momordica charantia] >XP_022152831.... [more]
XP_022152838.16.2e-3165.29protein cornichon homolog 4-like isoform X2 [Momordica charantia] >XP_022152841.... [more]
XP_008375821.12.9e-2050.41PREDICTED: protein cornichon homolog 4-like [Malus domestica][more]
BLAST of Cla97C06G109630 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CD35|A0A1S3CD35_CUCME2.9e-3772.22protein cornichon homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499... [more]
tr|A0A1S3CBU0|A0A1S3CBU0_CUCME2.9e-3772.22protein cornichon homolog 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499... [more]
tr|A0A2R6QPK5|A0A2R6QPK5_ACTCH8.0e-1946.28Protein cornichon like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
tr|A0A1S2XPU5|A0A1S2XPU5_CICAR1.0e-1842.42protein cornichon homolog 4-like OS=Cicer arietinum OX=3827 GN=LOC101499761 PE=4... [more]
tr|M5XE40|M5XE40_PRUPE1.4e-1847.11Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G146000 PE=4 SV=1[more]
BLAST of Cla97C06G109630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84W04|CNIH4_ARATH9.1e-1841.41Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV... [more]
sp|Q9C7D7|CNIH1_ARATH7.9e-1435.34Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV... [more]
sp|Q8GWT5|CNIH3_ARATH1.8e-1337.50Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV... [more]
sp|Q3EDD7|CNIH2_ARATH9.7e-1238.68Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234... [more]
sp|Q9SZ74|CNIH5_ARATH4.8e-1139.13Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV... [more]
BLAST of Cla97C06G109630 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12390.15.0e-1941.41Cornichon family protein[more]
AT3G12180.14.4e-1535.34Cornichon family protein[more]
AT1G62880.19.8e-1537.50Cornichon family protein[more]
AT1G12340.15.4e-1338.68Cornichon family protein[more]
AT4G12090.12.7e-1239.13Cornichon family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: INTERPRO
TermDefinition
IPR003377Cornichon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G109630.1Cla97C06G109630.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003377CornichonSMARTSM01398Cornichon_2coord: 4..126
e-value: 6.5E-21
score: 85.5
IPR003377CornichonPFAMPF03311Cornichoncoord: 5..123
e-value: 2.5E-22
score: 79.4
NoneNo IPR availablePANTHERPTHR12290:SF18PROTEIN CORNICHON HOMOLOG 3-RELATEDcoord: 1..123
NoneNo IPR availablePANTHERPTHR12290CORNICHON-RELATEDcoord: 1..123

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G109630MELO3C005588Melon (DHL92) v3.5.1mewmbB031
Cla97C06G109630CSPI05G06270Wild cucumber (PI 183967)cpiwmbB409
Cla97C06G109630Cucsa.302350Cucumber (Gy14) v1cgywmbB527
Cla97C06G109630Cucsa.362810Cucumber (Gy14) v1cgywmbB625
Cla97C06G109630CmaCh15G011690Cucurbita maxima (Rimu)cmawmbB313
Cla97C06G109630CmoCh15G012320Cucurbita moschata (Rifu)cmowmbB296
Cla97C06G109630Carg16684Silver-seed gourdcarwmbB0985
Cla97C06G109630CsaV3_5G003670Cucumber (Chinese Long) v3cucwmbB405
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla97C06G109630Cla97C01G003650Watermelon (97103) v2wmbwmbB030
The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G109630Watermelon (97103) v2wmbwmbB131
Cla97C06G109630Watermelon (97103) v2wmbwmbB140
Cla97C06G109630Silver-seed gourdcarwmbB0232
Cla97C06G109630Silver-seed gourdcarwmbB0648
Cla97C06G109630Silver-seed gourdcarwmbB1135
Cla97C06G109630Cucumber (Gy14) v2cgybwmbB218
Cla97C06G109630Cucumber (Gy14) v2cgybwmbB446
Cla97C06G109630Cucumber (Gy14) v1cgywmbB454
Cla97C06G109630Cucumber (Gy14) v1cgywmbB455
Cla97C06G109630Cucurbita maxima (Rimu)cmawmbB269
Cla97C06G109630Cucurbita maxima (Rimu)cmawmbB370
Cla97C06G109630Cucurbita maxima (Rimu)cmawmbB349
Cla97C06G109630Cucurbita maxima (Rimu)cmawmbB864
Cla97C06G109630Cucurbita maxima (Rimu)cmawmbB918
Cla97C06G109630Cucurbita moschata (Rifu)cmowmbB249
Cla97C06G109630Cucurbita moschata (Rifu)cmowmbB334
Cla97C06G109630Cucurbita moschata (Rifu)cmowmbB355
Cla97C06G109630Cucurbita moschata (Rifu)cmowmbB836
Cla97C06G109630Cucurbita moschata (Rifu)cmowmbB892
Cla97C06G109630Wild cucumber (PI 183967)cpiwmbB234
Cla97C06G109630Wild cucumber (PI 183967)cpiwmbB243
Cla97C06G109630Wild cucumber (PI 183967)cpiwmbB495
Cla97C06G109630Cucumber (Chinese Long) v3cucwmbB229
Cla97C06G109630Cucumber (Chinese Long) v3cucwmbB237
Cla97C06G109630Cucumber (Chinese Long) v3cucwmbB487
Cla97C06G109630Cucumber (Chinese Long) v2cuwmbB227
Cla97C06G109630Cucumber (Chinese Long) v2cuwmbB468
Cla97C06G109630Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G109630Bottle gourd (USVL1VR-Ls)lsiwmbB343
Cla97C06G109630Bottle gourd (USVL1VR-Ls)lsiwmbB345
Cla97C06G109630Melon (DHL92) v3.6.1medwmbB118
Cla97C06G109630Melon (DHL92) v3.6.1medwmbB439
Cla97C06G109630Melon (DHL92) v3.6.1medwmbB444
Cla97C06G109630Melon (DHL92) v3.5.1mewmbB127
Cla97C06G109630Melon (DHL92) v3.5.1mewmbB445
Cla97C06G109630Melon (DHL92) v3.5.1mewmbB449
Cla97C06G109630Watermelon (Charleston Gray)wcgwmbB234
Cla97C06G109630Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G109630Watermelon (97103) v1wmwmbB214
Cla97C06G109630Watermelon (97103) v1wmwmbB219
Cla97C06G109630Watermelon (97103) v1wmwmbB407
Cla97C06G109630Wax gourdwgowmbB092
Cla97C06G109630Wax gourdwgowmbB098
Cla97C06G109630Wax gourdwgowmbB162