Carg16684 (gene) Silver-seed gourd

Overview
NameCarg16684
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCornichon family protein
LocationCucurbita_argyrosperma_scaffold_064 : 588444 .. 590709 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAATCGCCTCTACGACAAGGAAGCAGTTGAAAAAAAGGTGTTGTCGGGGACCTCCGGTCGCCTTGAGAAATTTAGATCATCCAGAAGCGATCAATCCTTTGCGCGTCGGGATTAGACTCCGGCGAGGTTCACTGTGCACGGTTTTCTTTTATAATTCCTTCACCGCCTCCTTCAATCCATTTCCGCTTCCGCAGGCGCATGTGGGCCGGTGACGATGTGGCGGCGTTGAGGTTGATTTCAAATCGGACACGCAGGGAGAGCAACGAGATACGGGCAGTTGGTTGAGGGTATTAATATGGCGGATATCTACGTCTGGCTCCTCTCCTTCTTCATTATCATTGCGCTTCTTATACTCGTCGTTTTCCAGGTTCTCTCTAAACCCTAAAATTTCTGTCTCTTTTTCTTGATTTGTTATTCGAAGCTCTGTTTGTTTAATTCTCAGTCTACAGACTTACCTGAATATTCTTATGTCATGCTTTCAGATTGATTTTTGATTTGAAGGCCCTTTGATTTCTAGATATAAACACTAGCTACACTTTTTTTTGGATTCTTACATGTGTTCATTGGGCTAGTTCTATAGAATTGATATCGTAATTCCCTACATATGAATAATTGACATACAGTATTGTTAATTGCCTAAAACAAGGTTGGAACTGAGGAACTTATGATGCTTTTGAAACTTGCTGCAGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCATATGACTCCTCATCACGGATAAACAAAGTCGTTATGCCTGAGTTCATCACTCAAGGAGTCTTGTGCATCTTCTATCTCTTAACAGGGCATTGGATTATGTCATTGTTTTGTGTTCCTTACCTTTATTATAATATAAGATTGTAAGTTTCTCTAATTCTTACATCTTTGATCTGACTTTTTACTGTACTAGAGATATGGTTGCATAATTTTTAGTGGGGTATATGCTTTATATCGATTGCCAATTTTACCTATCAGAACCTCATTTATCATTCTGGGCTTTGAATTCAGTGTTTGAAAGAGAGGGCCTATCATGTTTTATAAAACAATACTAATGAGAGAGAGAGCTTATCATGCCTGGTAAACACTCGGTGGCCAAGTGCTGAGTGGATAGCTGGGGAAAGCATACAAGTAGTGAACTTGTAACCTTTTTTTGTTTGAATGTATGTTGTGTTAAAGCACCAACAGTCTCTTCTGAGATTTAGATTAATAACATTAGTTTTCAGATAAGTTTACGTGTTGGGATCTCATGGCTAGTCTCCTATTTACATTGTGAGATCCCCACATTGGTTGGAGAGGAAAACGAAGCATTTTTTTTAGAGTGTGGAAACCTCTCCTAACAGACGCATTTTAAAAACCTTGAGAGGAAGCCCGAAAGGAAAAGCCCAAAGAGGATAGTATCTGCTAGCGGTGGGCTTTGGCCGTTACAAATAGTATCAGAGTCAGACACCAGGCGATATGCCAACGCAAAAGGGGGTGGATTGGGGGGTCCCACATTGATTAAAGAAGGGAACGAGTGTCAACAAGGACGCTGGACTCCAAAGTGGGGTAGATTGTGAGATCCCACATCAGTTGAGAAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACATCTCTTAAAAACCTTGAAAGAATAATATTTGTTAGTGGTAGGTTTGGGCCGTTACAAATATGTAGTATGACTGGAACTAATTTACAGTGGATATCAAACTAACATATTTGAGATTGGGTTCTCGAGTTTTCCGTTGCTGGTAATTCATGCCAAGCTTGTTGATCTGTCTAATGTGTGGTGTCCTCATGATCAGGTACACTCAGCGGAAGCACCTGGTAGATGTTACTGAGATATTTAACCAGTTACCTTGGGAAAAAAAGCAAAGACTTTTCAAACTCGTCTATCTTGTTTCTCTCATCTTCCTCTCCATATTTTGGTAATCCAATTGGAGAGATCGTTTTCTTATTTTGAATCCTAGTTTTTAACATCATTAACATCTTCTTGTTTCTCTGCTTTGCAGGTTAATTTACAGTGCATTGGAGGATCATGAGTCTTGAATAGATCATGCAAAGTGTTGTCTTGTAAGAGATAAAGCCACTGTGCGGCTCACTACAAAGCTTGGTGTACTTACTCCCTAGGGTATCTTCTTGTGTTGTAATTCTAAAGCTTTTTTCTTCATTTCTTTTCATTCCTACTATATACTGGTATTTTTCTCTGCTGGCTATAAATGAAAATTTTTAAGATCT

mRNA sequence

AGGAATCGCCTCTACGACAAGGAAGCAGTTGAAAAAAAGGTGTTGTCGGGGACCTCCGGTCGCCTTGAGAAATTTAGATCATCCAGAAGCGATCAATCCTTTGCGCGTCGGGATTAGACTCCGGCGAGGTTCACTGTGCACGGTTTTCTTTTATAATTCCTTCACCGCCTCCTTCAATCCATTTCCGCTTCCGCAGGCGCATGTGGGCCGGTGACGATGTGGCGGCGTTGAGGTTGATTTCAAATCGGACACGCAGGGAGAGCAACGAGATACGGGCAGTTGGTTGAGGGTATTAATATGGCGGATATCTACGTCTGGCTCCTCTCCTTCTTCATTATCATTGCGCTTCTTATACTCGTCGTTTTCCAGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCATATGACTCCTCATCACGGATAAACAAAGTCGTTATGCCTGAGTTCATCACTCAAGGAGTCTTGTGCATCTTCTATCTCTTAACAGGGCATTGGATTATGTCATTGTTTTGTGTTCCTTACCTTTATTATAATATAAGATTGTACACTCAGCGGAAGCACCTGGTAGATGTTACTGAGATATTTAACCAGTTACCTTGGGAAAAAAAGCAAAGACTTTTCAAACTCGTCTATCTTGTTTCTCTCATCTTCCTCTCCATATTTTGGTTAATTTACAGTGCATTGGAGGATCATGAGTCTTGAATAGATCATGCAAAGTGTTGTCTTGTAAGAGATAAAGCCACTGTGCGGCTCACTACAAAGCTTGGTGTACTTACTCCCTAGGGTATCTTCTTGTGTTGTAATTCTAAAGCTTTTTTCTTCATTTCTTTTCATTCCTACTATATACTGGTATTTTTCTCTGCTGGCTATAAATGAAAATTTTTAAGATCT

Coding sequence (CDS)

ATGGCGGATATCTACGTCTGGCTCCTCTCCTTCTTCATTATCATTGCGCTTCTTATACTCGTCGTTTTCCAGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCATATGACTCCTCATCACGGATAAACAAAGTCGTTATGCCTGAGTTCATCACTCAAGGAGTCTTGTGCATCTTCTATCTCTTAACAGGGCATTGGATTATGTCATTGTTTTGTGTTCCTTACCTTTATTATAATATAAGATTGTACACTCAGCGGAAGCACCTGGTAGATGTTACTGAGATATTTAACCAGTTACCTTGGGAAAAAAAGCAAAGACTTTTCAAACTCGTCTATCTTGTTTCTCTCATCTTCCTCTCCATATTTTGGTTAATTTACAGTGCATTGGAGGATCATGAGTCTTGA

Protein sequence

MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFLSIFWLIYSALEDHES
Homology
[Close]
BLAST of Carg16684 vs. NCBI nr
Match: XP_022922295.1 (protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 1.7e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI
Sbjct: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]
BLAST of Carg16684 vs. NCBI nr
Match: XP_022969840.1 (protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 9.2e-67
Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
            FYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQL WEKKQRLFKLVYLVSLI
Sbjct: 61  FFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLAWEKKQRLFKLVYLVSLI 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]
BLAST of Carg16684 vs. NCBI nr
Match: XP_023532889.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 1.0e-65
Identity = 129/137 (94.16%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFF IIALLILVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           IFYLLTGHWIMS FCVPYLYYN+RLYTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SL+
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]
BLAST of Carg16684 vs. NCBI nr
Match: XP_022996131.1 (protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 257.7 bits (657), Expect = 2.3e-65
Identity = 128/137 (93.43%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFF IIALLILVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           IFYLLTGHWIMS FC+PYLYYN+RLYTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SL+
Sbjct: 61  IFYLLTGHWIMSFFCLPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]
BLAST of Carg16684 vs. NCBI nr
Match: XP_022957749.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 2.9e-65
Identity = 128/137 (93.43%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFF IIALLILVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           IFYLLTGHWIMS FCVPYLYYN+RLYTQR+HLVDVTEIFNQLPWEKK+RLFKLVYL+SL+
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQREHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]
BLAST of Carg16684 vs. TAIR10
Match: AT1G12390.1 (Cornichon family protein)

HSP 1 Score: 208.4 bits (529), Expect = 2.8e-54
Identity = 98/136 (72.06%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M DI+ WL+SFF +IAL+ ++V+QL+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +FYLLTGHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  +
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFW+IYSAL+D+E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]
BLAST of Carg16684 vs. TAIR10
Match: AT1G62880.1 (Cornichon family protein)

HSP 1 Score: 193.4 bits (490), Expect = 9.5e-50
Identity = 90/136 (66.18%), Postives = 116/136 (85.29%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M +++ W++SF I+I LL L+V+QL+ LADLEFDYINPYDS+SRIN VV+PE I QG LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +FYL+TGHW M+L CVPYLYYN  LY++++HL+DVTEIFN L WEKK+RLFKL Y++  +
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFWLIYS L+D+E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]
BLAST of Carg16684 vs. TAIR10
Match: AT1G12340.1 (Cornichon family protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-48
Identity = 86/115 (74.78%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 22  VFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYY 81
           +F L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLLTGHW M+L C+PYLYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFLSIFWLIYSALEDHE 137
           N  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  +FL+IFW+IYSAL+D+E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]
BLAST of Carg16684 vs. TAIR10
Match: AT4G12090.1 (Cornichon family protein)

HSP 1 Score: 160.6 bits (405), Expect = 6.8e-40
Identity = 73/134 (54.48%), Postives = 108/134 (80.60%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M D+  W++SF  +  L+I+V++QL CLADLEFD INPYD SSRIN++V+PEF  QG+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           ++Y+LTGHW M++  +P+L+YNIRLY +R+HL DVTE++N   WE+K+R++K+ ++   I
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWLIYSALED 135
           F++ +WLI+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]
BLAST of Carg16684 vs. TAIR10
Match: AT3G12180.1 (Cornichon family protein)

HSP 1 Score: 127.1 bits (318), Expect = 8.3e-30
Identity = 63/138 (45.65%), Postives = 98/138 (71.01%), Query Frame = 0 

Query: 3   DIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIF 62
           D+++W++SFF+ +AL+  V +Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFL 122
           +LLT HW+  L  VP   Y+  LY +R++L+DVTE+F  + +EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWL----IYSALEDHE 137
            +F L    +YS  ED +
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

[Close]
BLAST of Carg16684 vs. Swiss-Prot
Match: sp|Q84W04|CNIH4_ARATH (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-53
Identity = 98/136 (72.06%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M DI+ WL+SFF +IAL+ ++V+QL+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +FYLLTGHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  +
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFW+IYSAL+D+E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]
BLAST of Carg16684 vs. Swiss-Prot
Match: sp|Q8GWT5|CNIH3_ARATH (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-48
Identity = 90/136 (66.18%), Postives = 116/136 (85.29%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M +++ W++SF I+I LL L+V+QL+ LADLEFDYINPYDS+SRIN VV+PE I QG LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +FYL+TGHW M+L CVPYLYYN  LY++++HL+DVTEIFN L WEKK+RLFKL Y++  +
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFWLIYS L+D+E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]
BLAST of Carg16684 vs. Swiss-Prot
Match: sp|Q3EDD7|CNIH2_ARATH (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-47
Identity = 86/115 (74.78%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 22  VFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYY 81
           +F L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLLTGHW M+L C+PYLYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFLSIFWLIYSALEDHE 137
           N  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  +FL+IFW+IYSAL+D+E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]
BLAST of Carg16684 vs. Swiss-Prot
Match: sp|Q9SZ74|CNIH5_ARATH (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38
Identity = 73/134 (54.48%), Postives = 108/134 (80.60%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M D+  W++SF  +  L+I+V++QL CLADLEFD INPYD SSRIN++V+PEF  QG+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           ++Y+LTGHW M++  +P+L+YNIRLY +R+HL DVTE++N   WE+K+R++K+ ++   I
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWLIYSALED 135
           F++ +WLI+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]
BLAST of Carg16684 vs. Swiss-Prot
Match: sp|Q9C7D7|CNIH1_ARATH (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-28
Identity = 63/138 (45.65%), Postives = 98/138 (71.01%), Query Frame = 0 

Query: 3   DIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIF 62
           D+++W++SFF+ +AL+  V +Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLIFL 122
           +LLT HW+  L  VP   Y+  LY +R++L+DVTE+F  + +EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWL----IYSALEDHE 137
            +F L    +YS  ED +
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

[Close]
BLAST of Carg16684 vs. TrEMBL
Match: tr|A0A0A0KMS0|A0A0A0KMS0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.8e-64
Identity = 126/137 (91.97%), Postives = 134/137 (97.81%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFF IIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           IFYLL+GHW+MSL C+P LYYN+R+YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSL+
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]
BLAST of Carg16684 vs. TrEMBL
Match: tr|A0A1S3ATW1|A0A1S3ATW1_CUCME (protein cornichon homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103482667 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63
Identity = 124/137 (90.51%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           MADIYVWLLSFF IIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           IFYLL+GHW+MSL C+P LYYN+++YTQR HLVDVTEIFNQLPWEKKQRLFKLVYLVSL+
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLKMYTQRNHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]
BLAST of Carg16684 vs. TrEMBL
Match: tr|V4TUZ4|V4TUZ4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022790mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-58
Identity = 110/136 (80.88%), Postives = 128/136 (94.12%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M D+++WL SFFI+IALL+LVV+QLMCLADLEFDYINPYDSSSRINKVV+PEFIT+GVLC
Sbjct: 1   MGDLFIWLASFFILIALLVLVVYQLMCLADLEFDYINPYDSSSRINKVVLPEFITEGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +F+L+TGHW MSL CVPYLYYN+RLYTQR+HLVDVTEIFNQL WEKKQRLFKL YL+ L+
Sbjct: 61  VFFLITGHWFMSLLCVPYLYYNVRLYTQRQHLVDVTEIFNQLHWEKKQRLFKLAYLIFLL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FLSIFW+I+ ALEDH+
Sbjct: 121 FLSIFWMIWCALEDHD 136

[Close]
BLAST of Carg16684 vs. TrEMBL
Match: tr|A0A2H5NTI0|A0A2H5NTI0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_074430 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-58
Identity = 110/136 (80.88%), Postives = 128/136 (94.12%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M D+++WL SFFI+IALL+LVV+QLMCLADLEFDYINPYDSSSRINKVV+PEFIT+GVLC
Sbjct: 1   MGDLFIWLASFFILIALLVLVVYQLMCLADLEFDYINPYDSSSRINKVVLPEFITEGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +F+L+TGHW MSL CVPYLYYN+RLYTQR+HLVDVTEIFNQL WEKKQRLFKL YL+ L+
Sbjct: 61  VFFLITGHWFMSLLCVPYLYYNVRLYTQRQHLVDVTEIFNQLHWEKKQRLFKLAYLIFLL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FLSIFW+I+ ALEDH+
Sbjct: 121 FLSIFWMIWCALEDHD 136

[Close]
BLAST of Carg16684 vs. TrEMBL
Match: tr|A0A067FKN5|A0A067FKN5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032611mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-58
Identity = 110/136 (80.88%), Postives = 128/136 (94.12%), Query Frame = 0 

Query: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60
           M D+++WL SFFI+IALL+LVV+QLMCLADLEFDYINPYDSSSRINKVV+PEFIT+GVLC
Sbjct: 1   MGDLFIWLASFFILIALLVLVVYQLMCLADLEFDYINPYDSSSRINKVVLPEFITEGVLC 60

Query: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120
           +F+L+TGHW MSL CVPYLYYN+RLYTQR+HLVDVTEIFNQL WEKKQRLFKL YL+ L+
Sbjct: 61  VFFLITGHWFMSLLCVPYLYYNVRLYTQRQHLVDVTEIFNQLHWEKKQRLFKLAYLIFLL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FLSIFW+I+ ALEDH+
Sbjct: 121 FLSIFWMIWCALEDHD 136

The following BLAST results are available for this feature:
BLAST of Carg16684 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922295.11.7e-68100.00protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein co... [more]
XP_022969840.19.2e-6797.81protein cornichon homolog 4-like [Cucurbita maxima][more]
XP_023532889.11.0e-6594.16protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 pr... [more]
XP_022996131.12.3e-6593.43protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein corn... [more]
XP_022957749.12.9e-6593.43protein cornichon homolog 4-like [Cucurbita moschata][more]
BLAST of Carg16684 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12390.12.8e-5472.06Cornichon family protein[more]
AT1G62880.19.5e-5066.18Cornichon family protein[more]
AT1G12340.11.0e-4874.78Cornichon family protein[more]
AT4G12090.16.8e-4054.48Cornichon family protein[more]
AT3G12180.18.3e-3045.65Cornichon family protein[more]
BLAST of Carg16684 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84W04|CNIH4_ARATH5.1e-5372.06Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV... [more]
sp|Q8GWT5|CNIH3_ARATH1.7e-4866.18Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV... [more]
sp|Q3EDD7|CNIH2_ARATH1.9e-4774.78Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234... [more]
sp|Q9SZ74|CNIH5_ARATH1.2e-3854.48Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV... [more]
sp|Q9C7D7|CNIH1_ARATH1.5e-2845.65Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV... [more]
BLAST of Carg16684 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KMS0|A0A0A0KMS0_CUCSA4.8e-6491.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=4 SV=1[more]
tr|A0A1S3ATW1|A0A1S3ATW1_CUCME4.1e-6390.51protein cornichon homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103482667 PE=4 SV... [more]
tr|V4TUZ4|V4TUZ4_9ROSI3.9e-5880.88Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022790mg PE=4 ... [more]
tr|A0A2H5NTI0|A0A2H5NTI0_CITUN3.9e-5880.88Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_074430 PE=4 SV=1[more]
tr|A0A067FKN5|A0A067FKN5_CITSI3.9e-5880.88Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032611mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: INTERPRO
TermDefinition
IPR003377Cornichon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16684-RACarg16684-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003377CornichonSMARTSM01398Cornichon_2coord: 4..125
e-value: 5.4E-61
score: 218.6
IPR003377CornichonPFAMPF03311Cornichoncoord: 6..125
e-value: 5.3E-42
score: 142.9
NoneNo IPR availablePANTHERPTHR12290:SF18PROTEIN CORNICHON HOMOLOG 3-RELATEDcoord: 1..135
NoneNo IPR availablePANTHERPTHR12290CORNICHON-RELATEDcoord: 1..135

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16684Csa3G036490Cucumber (Chinese Long) v2carcuB0953
Carg16684Csa5G157960Cucumber (Chinese Long) v2carcuB0954
Carg16684MELO3C005588Melon (DHL92) v3.5.1carmeB0920
Carg16684MELO3C013992Melon (DHL92) v3.5.1carmeB0921
Carg16684ClCG01G003550Watermelon (Charleston Gray)carwcgB0912
Carg16684ClCG10G003230Watermelon (Charleston Gray)carwcgB0911
Carg16684CSPI05G06270Wild cucumber (PI 183967)carcpiB0977
Carg16684CSPI03G03220Wild cucumber (PI 183967)carcpiB0975
Carg16684Cucsa.320380Cucumber (Gy14) v1carcgyB1055
Carg16684Cucsa.302350Cucumber (Gy14) v1carcgyB1054
Carg16684CmaCh16G010370Cucurbita maxima (Rimu)carcmaB1282
Carg16684CmaCh15G011690Cucurbita maxima (Rimu)carcmaB1281
Carg16684CmaCh06G007480Cucurbita maxima (Rimu)carcmaB1285
Carg16684CmaCh02G015080Cucurbita maxima (Rimu)carcmaB1284
Carg16684CmoCh06G007720Cucurbita moschata (Rifu)carcmoB1256
Carg16684CmoCh02G015490Cucurbita moschata (Rifu)carcmoB1255
Carg16684CmoCh15G012320Cucurbita moschata (Rifu)carcmoB1252
Carg16684Lsi07G013520Bottle gourd (USVL1VR-Ls)carlsiB854
Carg16684Cp4.1LG08g07630Cucurbita pepo (Zucchini)carcpeB1299
Carg16684Cp4.1LG05g03730Cucurbita pepo (Zucchini)carcpeB1297
Carg16684Cp4.1LG14g08620Cucurbita pepo (Zucchini)carcpeB1296
Carg16684Cp4.1LG13g02010Cucurbita pepo (Zucchini)carcpeB1295
Carg16684CsGy3G003170Cucumber (Gy14) v2carcgybB0925
Carg16684CsGy5G003590Cucumber (Gy14) v2carcgybB0927
Carg16684CsaV3_5G003670Cucumber (Chinese Long) v3carcucB0979
Carg16684CsaV3_3G003260Cucumber (Chinese Long) v3carcucB0977
Carg16684Cla97C01G003650Watermelon (97103) v2carwmbB0980
Carg16684Cla97C06G109630Watermelon (97103) v2carwmbB0985
Carg16684Bhi12G000340Wax gourdcarwgoB1080
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16684Carg25283Silver-seed gourdcarcarB634
Carg16684Carg21612Silver-seed gourdcarcarB636
Carg16684Carg02478Silver-seed gourdcarcarB642
The following block(s) are covering this gene:
GeneOrganismBlock
Carg16684Silver-seed gourdcarcarB476
Carg16684Silver-seed gourdcarcarB643
Carg16684Cucumber (Gy14) v2carcgybB0924
Carg16684Cucurbita maxima (Rimu)carcmaB1283
Carg16684Cucurbita moschata (Rifu)carcmoB1254
Carg16684Cucurbita pepo (Zucchini)carcpeB1298
Carg16684Wild cucumber (PI 183967)carcpiB0974
Carg16684Cucumber (Chinese Long) v2carcuB0951
Carg16684Cucumber (Chinese Long) v3carcucB0975
Carg16684Bottle gourd (USVL1VR-Ls)carlsiB851
Carg16684Bottle gourd (USVL1VR-Ls)carlsiB852
Carg16684Bottle gourd (USVL1VR-Ls)carlsiB853
Carg16684Melon (DHL92) v3.5.1carmeB0922
Carg16684Melon (DHL92) v3.6.1carmedB0927
Carg16684Melon (DHL92) v3.6.1carmedB0928
Carg16684Watermelon (97103) v1carwmB0936
Carg16684Watermelon (97103) v1carwmB0937
Carg16684Watermelon (97103) v1carwmB0938
Carg16684Watermelon (97103) v2carwmbB0981
Carg16684Watermelon (97103) v2carwmbB0983
Carg16684Wax gourdcarwgoB1083