Cla97C05G102240 (gene) Watermelon (97103) v2

Overview
NameCla97C05G102240
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 30561915 .. 30562599 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATGGGGAGTTGGCGTGGGGCGACGTGCAGGGCATGCGTGGGCGATGGATGATGGCACAGTTTGTTGCGTTCGTTTTACTGTGGTGAAGGTCGTTCTCATATCTTCAATTCCCTTTTGCGGTTTCGTTACTTTTACCTTTTTGCTTTTTTTACCCTGATTTTGTTTCCTTTTCTAGTGAATTTCTATGGCGGCGATTTTTTCTCAGGATATTAAATGAGTATAATTAAGTTCAGTGGTGCCTGTAATTCGTTTCTTTTTTGATTTAGGACGCGTGTTGTTACTTTGTTATTTGTTTTTTTTTTTCATTTTTTGTAACCCTTGACGCCATAGAAACGTGAAAAATAAAACATTTATGTAAGGAAAAAATTTGGGGTATTCTTCTTCCACCTACAATTTCATTGGGGGTGGCAAAGTATGATTTTGCCACGTACCCAAGTAAAGGAAAATCGAAAAGGATGGAACTTTGGAACACCCATCTGGGATTTTATATATATATATATATTTTTTTTGTCCAAGTGGCTGCAAAATGTGGTAGGGGAAAAAAGATACGACTTTTGTGGACTCTTTCCGCAAGGAAGGAACGATGTAATTTGGTGCACAAAGCAATTCCAAGCAAAGCCACCGCGTCCGGAATATTCTCAAAAAAAGGAAAAAACTTGCCATTAGTTGCGGCATAA

mRNA sequence

ATGGAGAAATGGGGAGTTGGCGTGGGGCGACGTGCAGGGCATGCGTGGGCGATGGATGATGGCACAGTTTGTTGCGTTCGTTTTACTGTGGTGAAGGAAAAAATTTGGGGTATTCTTCTTCCACCTACAATTTCATTGGGGGTGGCAAAGTATGATTTTGCCACGTACCCAATGGCTGCAAAATGTGGTAGGGGAAAAAAGATACGACTTTTGTGGACTCTTTCCGCAAGGAAGGAACGATGTAATTTGGTGCACAAAGCAATTCCAAGCAAAGCCACCGCGTCCGGAATATTCTCAAAAAAAGGAAAAAACTTGCCATTAGTTGCGGCATAA

Coding sequence (CDS)

ATGGAGAAATGGGGAGTTGGCGTGGGGCGACGTGCAGGGCATGCGTGGGCGATGGATGATGGCACAGTTTGTTGCGTTCGTTTTACTGTGGTGAAGGAAAAAATTTGGGGTATTCTTCTTCCACCTACAATTTCATTGGGGGTGGCAAAGTATGATTTTGCCACGTACCCAATGGCTGCAAAATGTGGTAGGGGAAAAAAGATACGACTTTTGTGGACTCTTTCCGCAAGGAAGGAACGATGTAATTTGGTGCACAAAGCAATTCCAAGCAAAGCCACCGCGTCCGGAATATTCTCAAAAAAAGGAAAAAACTTGCCATTAGTTGCGGCATAA

Protein sequence

MEKWGVGVGRRAGHAWAMDDGTVCCVRFTVVKEKIWGILLPPTISLGVAKYDFATYPMAAKCGRGKKIRLLWTLSARKERCNLVHKAIPSKATASGIFSKKGKNLPLVAA
Homology
[Close]
BLAST of Cla97C05G102240 vs. NCBI nr
Match: KGN55264.1 (hypothetical protein Csa_4G642450 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 8.0e-05
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 38  ILLPPTISLGVAKYDFATYPMAAKCGRGKKIRLLWTLSARKERCNLVHKAIPSKATASGI 97
           ++LPP I LG+AKYDFATYP   K  R K    +WTLSA KER     K + +K      
Sbjct: 8   VILPPAIPLGLAKYDFATYP---KKKRKKDTTFVWTLSASKERSGFGAKQLEAKPPRPE- 67

Query: 98  FSKKGKNLPLVAA 111
           +S+K   LP+  A
Sbjct: 68  YSQKRNKLPMSCA 76

[Close]
BLAST of Cla97C05G102240 vs. TrEMBL
Match: tr|A0A0A0L2J9|A0A0A0L2J9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642450 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-05
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 38  ILLPPTISLGVAKYDFATYPMAAKCGRGKKIRLLWTLSARKERCNLVHKAIPSKATASGI 97
           ++LPP I LG+AKYDFATYP   K  R K    +WTLSA KER     K + +K      
Sbjct: 8   VILPPAIPLGLAKYDFATYP---KKKRKKDTTFVWTLSASKERSGFGAKQLEAKPPRPE- 67

Query: 98  FSKKGKNLPLVAA 111
           +S+K   LP+  A
Sbjct: 68  YSQKRNKLPMSCA 76

The following BLAST results are available for this feature:
BLAST of Cla97C05G102240 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55264.18.0e-0545.21hypothetical protein Csa_4G642450 [Cucumis sativus][more]
BLAST of Cla97C05G102240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L2J9|A0A0A0L2J9_CUCSA5.3e-0545.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642450 PE=4 SV=1[more]
BLAST of Cla97C05G102240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G102240 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G102240.1Cla97C05G102240.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G102240Watermelon (97103) v2wmbwmbB102
Cla97C05G102240Watermelon (97103) v2wmbwmbB142
Cla97C05G102240Silver-seed gourdcarwmbB0187
Cla97C05G102240Silver-seed gourdcarwmbB0305
Cla97C05G102240Silver-seed gourdcarwmbB0330
Cla97C05G102240Silver-seed gourdcarwmbB0399
Cla97C05G102240Silver-seed gourdcarwmbB0429
Cla97C05G102240Silver-seed gourdcarwmbB0478
Cla97C05G102240Silver-seed gourdcarwmbB0807
Cla97C05G102240Cucumber (Gy14) v1cgywmbB397
Cla97C05G102240Cucumber (Gy14) v2cgybwmbB127
Cla97C05G102240Cucumber (Gy14) v2cgybwmbB290
Cla97C05G102240Cucumber (Gy14) v2cgybwmbB513
Cla97C05G102240Cucumber (Gy14) v1cgywmbB602
Cla97C05G102240Cucumber (Gy14) v1cgywmbB674
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB026
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB127
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB183
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB348
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB479
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB535
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB696
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB770
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB820
Cla97C05G102240Cucurbita maxima (Rimu)cmawmbB902
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB014
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB112
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB166
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB333
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB461
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB519
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB742
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB793
Cla97C05G102240Cucurbita moschata (Rifu)cmowmbB872
Cla97C05G102240Wild cucumber (PI 183967)cpiwmbB137
Cla97C05G102240Wild cucumber (PI 183967)cpiwmbB316
Cla97C05G102240Wild cucumber (PI 183967)cpiwmbB568
Cla97C05G102240Cucumber (Chinese Long) v3cucwmbB137
Cla97C05G102240Cucumber (Chinese Long) v3cucwmbB314
Cla97C05G102240Cucumber (Chinese Long) v3cucwmbB563
Cla97C05G102240Cucumber (Chinese Long) v2cuwmbB135
Cla97C05G102240Cucumber (Chinese Long) v2cuwmbB305
Cla97C05G102240Cucumber (Chinese Long) v2cuwmbB542
Cla97C05G102240Bottle gourd (USVL1VR-Ls)lsiwmbB237
Cla97C05G102240Bottle gourd (USVL1VR-Ls)lsiwmbB288
Cla97C05G102240Bottle gourd (USVL1VR-Ls)lsiwmbB435
Cla97C05G102240Melon (DHL92) v3.6.1medwmbB179
Cla97C05G102240Melon (DHL92) v3.6.1medwmbB277
Cla97C05G102240Melon (DHL92) v3.6.1medwmbB477
Cla97C05G102240Melon (DHL92) v3.5.1mewmbB193
Cla97C05G102240Melon (DHL92) v3.5.1mewmbB293
Cla97C05G102240Melon (DHL92) v3.5.1mewmbB485
Cla97C05G102240Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G102240Watermelon (Charleston Gray)wcgwmbB327
Cla97C05G102240Watermelon (97103) v1wmwmbB091
Cla97C05G102240Watermelon (97103) v1wmwmbB207
Cla97C05G102240Wax gourdwgowmbB301
Cla97C05G102240Wax gourdwgowmbB579