Cla97C05G092880 (gene) Watermelon (97103) v2

NameCla97C05G092880
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionGamete expressed protein 1, putative
LocationCla97Chr05 : 11120982 .. 11121437 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTAGGGAATTTCAAGCGGTGGTTTCAGTTTCTCCTTTGTTTGAATTTGGTAGAAGACTGTTGGTTTTCAATGGAGCGTGTTCTGTTTCCGGTGATTCTGTTGTTTGTATTGCCCAAATGCGAATCCTGGGGTTGGTTTTCGTCTTCTTCGTTCTCGGACTCTACCATGGATCCTTCTAAGCAGTACACTGTTGCTGAATTTTCCATGGAGGGTTTCGATGACCGAACGGGGGTGAGGCGAATTGAGAATGCTAAGAACAAATTAACTTTGTCCAATTCTTGTTGGGAAAGTGCTTACAGGCATCTATTTGCGGGCTGGTCTGAGATTTTTGCTGCGGATGAGAAACGGTCGAGATTTGCTTGGCATCTTAGTGATTGCTTTCAGAAGGATTCTGGCAGGCCTCCTTTTCCTTCTTGTGACCAAAAATCCCCCATGGCCGAATGCCTCTAA

mRNA sequence

ATGGGTTTAGGGAATTTCAAGCGGTGGTTTCAGTTTCTCCTTTGTTTGAATTTGGTAGAAGACTGTTGGTTTTCAATGGAGCGTGTTCTGTTTCCGGTGATTCTGTTGTTTGTATTGCCCAAATGCGAATCCTGGGGTTGGTTTTCGTCTTCTTCGTTCTCGGACTCTACCATGGATCCTTCTAAGCAGTACACTGTTGCTGAATTTTCCATGGAGGGTTTCGATGACCGAACGGGGGTGAGGCGAATTGAGAATGCTAAGAACAAATTAACTTTGTCCAATTCTTGTTGGGAAAGTGCTTACAGGCATCTATTTGCGGGCTGGTCTGAGATTTTTGCTGCGGATGAGAAACGGTCGAGATTTGCTTGGCATCTTAGTGATTGCTTTCAGAAGGATTCTGGCAGGCCTCCTTTTCCTTCTTGTGACCAAAAATCCCCCATGGCCGAATGCCTCTAA

Coding sequence (CDS)

ATGGGTTTAGGGAATTTCAAGCGGTGGTTTCAGTTTCTCCTTTGTTTGAATTTGGTAGAAGACTGTTGGTTTTCAATGGAGCGTGTTCTGTTTCCGGTGATTCTGTTGTTTGTATTGCCCAAATGCGAATCCTGGGGTTGGTTTTCGTCTTCTTCGTTCTCGGACTCTACCATGGATCCTTCTAAGCAGTACACTGTTGCTGAATTTTCCATGGAGGGTTTCGATGACCGAACGGGGGTGAGGCGAATTGAGAATGCTAAGAACAAATTAACTTTGTCCAATTCTTGTTGGGAAAGTGCTTACAGGCATCTATTTGCGGGCTGGTCTGAGATTTTTGCTGCGGATGAGAAACGGTCGAGATTTGCTTGGCATCTTAGTGATTGCTTTCAGAAGGATTCTGGCAGGCCTCCTTTTCCTTCTTGTGACCAAAAATCCCCCATGGCCGAATGCCTCTAA

Protein sequence

MGLGNFKRWFQFLLCLNLVEDCWFSMERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKSPMAECL
BLAST of Cla97C05G092880 vs. NCBI nr
Match: XP_023529107.1 (protein GAMETE EXPRESSED 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 9.2e-52
Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 0

Query: 20  EDCWFSMERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQY---TVAEFSMEGFDD 79
           E   FSME +LF VILLF LP CESW WFSSSS S S+M   K     +V+EFS+EGFDD
Sbjct: 73  ETVGFSMEHILFLVILLFALPNCESWNWFSSSSSSGSSMGSFKSVEGGSVSEFSIEGFDD 132

Query: 80  RTGVRRIENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRP 139
           + GVRRIENAKNKL+ SNSCWE AYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRP
Sbjct: 133 QKGVRRIENAKNKLSTSNSCWEGAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRP 192

Query: 140 PFPSCDQKSPMAECL 152
           PFPSCD +SPMA+CL
Sbjct: 193 PFPSCDAESPMAKCL 207

BLAST of Cla97C05G092880 vs. NCBI nr
Match: XP_008454365.1 (PREDICTED: protein GAMETE EXPRESSED 1 isoform X1 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIEN 85
           M+R+LF VILLF LP CESW WFSSSS S S+ D  +  +VAEF++EGFDD+ GVRRIEN
Sbjct: 1   MDRILFLVILLFALPNCESWNWFSSSSSSGSSFDRVEGGSVAEFAIEGFDDQKGVRRIEN 60

Query: 86  AKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKS 145
           AKNKL++SNSCW SAYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRP FP+CD KS
Sbjct: 61  AKNKLSVSNSCWGSAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPSFPNCDAKS 120

Query: 146 PMAECL 152
           PMA+CL
Sbjct: 121 PMAKCL 126

BLAST of Cla97C05G092880 vs. NCBI nr
Match: XP_016901473.1 (PREDICTED: protein GAMETE EXPRESSED 1 isoform X2 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIEN 85
           M+R+LF VILLF LP CESW WFSSSS S S+ D  +  +VAEF++EGFDD+ GVRRIEN
Sbjct: 1   MDRILFLVILLFALPNCESWNWFSSSSSSGSSFDRVEGGSVAEFAIEGFDDQKGVRRIEN 60

Query: 86  AKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKS 145
           AKNKL++SNSCW SAYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRP FP+CD KS
Sbjct: 61  AKNKLSVSNSCWGSAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPSFPNCDAKS 120

Query: 146 PMAECL 152
           PMA+CL
Sbjct: 121 PMAKCL 126

BLAST of Cla97C05G092880 vs. NCBI nr
Match: XP_022935308.1 (protein GAMETE EXPRESSED 1 [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50
Identity = 100/129 (77.52%), Postives = 110/129 (85.27%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQY---TVAEFSMEGFDDRTGVRR 85
           ME +LF VILLF LP CESW WFSSSS S S+M   K+    +V+EFS+EGFDD+ GVRR
Sbjct: 1   MEHILFLVILLFALPNCESWNWFSSSSSSGSSMGSFKRVEGGSVSEFSIEGFDDQKGVRR 60

Query: 86  IENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCD 145
           IENAKNKL+ SNSCWE AYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCD
Sbjct: 61  IENAKNKLSTSNSCWEGAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCD 120

Query: 146 QKSPMAECL 152
            +SPMA+CL
Sbjct: 121 AESPMAKCL 129

BLAST of Cla97C05G092880 vs. NCBI nr
Match: XP_022143299.1 (protein GAMETE EXPRESSED 1 [Momordica charantia] >XP_022143300.1 protein GAMETE EXPRESSED 1 [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50
Identity = 104/129 (80.62%), Postives = 108/129 (83.72%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQY---TVAEFSMEGFDDRTGVRR 85
           MER LF VILL    KCESW WFSSSS SDS M   K+    TVAEFSMEGFDD+ GVRR
Sbjct: 1   MERFLFLVILLLASGKCESWIWFSSSSSSDSAMGSFKRIEGGTVAEFSMEGFDDQKGVRR 60

Query: 86  IENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCD 145
           IENAKNKLT SNSCWESAYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCD
Sbjct: 61  IENAKNKLTASNSCWESAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCD 120

Query: 146 QKSPMAECL 152
            KS M++CL
Sbjct: 121 PKSAMSKCL 129

BLAST of Cla97C05G092880 vs. TrEMBL
Match: tr|A0A1S4DZR5|A0A1S4DZR5_CUCME (protein GAMETE EXPRESSED 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494785 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIEN 85
           M+R+LF VILLF LP CESW WFSSSS S S+ D  +  +VAEF++EGFDD+ GVRRIEN
Sbjct: 1   MDRILFLVILLFALPNCESWNWFSSSSSSGSSFDRVEGGSVAEFAIEGFDDQKGVRRIEN 60

Query: 86  AKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKS 145
           AKNKL++SNSCW SAYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRP FP+CD KS
Sbjct: 61  AKNKLSVSNSCWGSAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPSFPNCDAKS 120

Query: 146 PMAECL 152
           PMA+CL
Sbjct: 121 PMAKCL 126

BLAST of Cla97C05G092880 vs. TrEMBL
Match: tr|A0A1S3BZN2|A0A1S3BZN2_CUCME (protein GAMETE EXPRESSED 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494785 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIEN 85
           M+R+LF VILLF LP CESW WFSSSS S S+ D  +  +VAEF++EGFDD+ GVRRIEN
Sbjct: 1   MDRILFLVILLFALPNCESWNWFSSSSSSGSSFDRVEGGSVAEFAIEGFDDQKGVRRIEN 60

Query: 86  AKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKS 145
           AKNKL++SNSCW SAYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRP FP+CD KS
Sbjct: 61  AKNKLSVSNSCWGSAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPSFPNCDAKS 120

Query: 146 PMAECL 152
           PMA+CL
Sbjct: 121 PMAKCL 126

BLAST of Cla97C05G092880 vs. TrEMBL
Match: tr|A0A0A0KT36|A0A0A0KT36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001620 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIEN 85
           M+R+LF VILLF LP CESW WFSSSS S S+ +  +  + AEF++EGFDD+ GVRRIEN
Sbjct: 1   MDRILFLVILLFALPNCESWNWFSSSSSSASSFNRVEGGSGAEFAIEGFDDQKGVRRIEN 60

Query: 86  AKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKS 145
           AKNKLT+SNSCWESAYRHLFAG SEIFAADEKRSRFAWHLSDCFQKDSGRP FP+CD KS
Sbjct: 61  AKNKLTVSNSCWESAYRHLFAGCSEIFAADEKRSRFAWHLSDCFQKDSGRPSFPNCDAKS 120

Query: 146 PMAECL 152
           PMA+CL
Sbjct: 121 PMAKCL 126

BLAST of Cla97C05G092880 vs. TrEMBL
Match: tr|A0A0A0L6W7|A0A0A0L6W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G194400 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.8e-46
Identity = 98/126 (77.78%), Postives = 102/126 (80.95%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSSFSDSTMDPSKQYTVAEFSMEGFDDRTGVRRIEN 85
           MERVLF VILL V P CES GWFSSS  SDSTM+PSK YTVAE+SMEGFDDR GVR I+N
Sbjct: 1   MERVLFMVILLVVFPMCESRGWFSSSPSSDSTMNPSKHYTVAEYSMEGFDDRKGVRGIQN 60

Query: 86  AKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSCDQKS 145
           AKNKLTL NSCWESAYRHLF+G SEIFAADEKR        DCFQKDSGRPPFPSC  KS
Sbjct: 61  AKNKLTLLNSCWESAYRHLFSGCSEIFAADEKR--------DCFQKDSGRPPFPSCHPKS 118

Query: 146 PMAECL 152
            M ECL
Sbjct: 121 LMVECL 118

BLAST of Cla97C05G092880 vs. TrEMBL
Match: tr|A0A2I4EBQ9|A0A2I4EBQ9_9ROSI (protein GAMETE EXPRESSED 1 OS=Juglans regia OX=51240 GN=LOC108988149 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.0e-40
Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 0

Query: 26  MERVLFPVILLFVLPKCESWGWFSSSS----FSDSTMDPSKQYTVAEFSMEGFDDRTGVR 85
           M R+L  +IL+  L +C+SWGW +SS     F +    P+    VAEF+++GF+D+ GVR
Sbjct: 1   MGRLLLLLILISFLRECQSWGWSTSSKKETHFEEKDSGPNDVSGVAEFTIDGFNDQKGVR 60

Query: 86  RIENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRPPFPSC 145
           +IE AK KL  +NSCW++AYRHLFAG SEIFA DEKRSRFAWHLSDCFQKDSGRPPFPSC
Sbjct: 61  QIETAKRKLVGTNSCWQNAYRHLFAGCSEIFAVDEKRSRFAWHLSDCFQKDSGRPPFPSC 120

Query: 146 DQKSPMAECL 152
           D KS MA+CL
Sbjct: 121 DPKSAMAKCL 130

BLAST of Cla97C05G092880 vs. Swiss-Prot
Match: sp|Q681K7|GEX1_ARATH (Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana OX=3702 GN=GEX1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.5e-25
Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 0

Query: 24  FSMERVLF--PVILLFVLPKCESWGWFSSSSFS-----DSTMDPSKQYTVAEFSMEGFDD 83
           FS + +LF   +ILL     C SWGWFSSSS S      S+   S++ +  +FSME F D
Sbjct: 4   FSRKCLLFLLLIILLDSPLTCHSWGWFSSSSSSAEDPYSSSFSRSRK-SNPDFSMEVFSD 63

Query: 84  RTGVRRIENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRP 143
           +  V+ +E   NKL    SCW++AY +L AG  E  A +EKR RFAW+LSDCF KDSGRP
Sbjct: 64  QKAVQVLE---NKLVGLTSCWQNAYSYLLAGCKETIATEEKRKRFAWYLSDCFIKDSGRP 123

Query: 144 PFPSCDQKSPMAECL 152
            FP+C  +S M  CL
Sbjct: 124 AFPTCKDESVMMSCL 134

BLAST of Cla97C05G092880 vs. TAIR10
Match: AT5G55490.1 (gamete expressed protein 1)

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-26
Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 0

Query: 24  FSMERVLF--PVILLFVLPKCESWGWFSSSSFS-----DSTMDPSKQYTVAEFSMEGFDD 83
           FS + +LF   +ILL     C SWGWFSSSS S      S+   S++ +  +FSME F D
Sbjct: 4   FSRKCLLFLLLIILLDSPLTCHSWGWFSSSSSSAEDPYSSSFSRSRK-SNPDFSMEVFSD 63

Query: 84  RTGVRRIENAKNKLTLSNSCWESAYRHLFAGWSEIFAADEKRSRFAWHLSDCFQKDSGRP 143
           +  V+ +E   NKL    SCW++AY +L AG  E  A +EKR RFAW+LSDCF KDSGRP
Sbjct: 64  QKAVQVLE---NKLVGLTSCWQNAYSYLLAGCKETIATEEKRKRFAWYLSDCFIKDSGRP 123

Query: 144 PFPSCDQKSPMAECL 152
            FP+C  +S M  CL
Sbjct: 124 AFPTCKDESVMMSCL 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023529107.19.2e-5276.30protein GAMETE EXPRESSED 1 [Cucurbita pepo subsp. pepo][more]
XP_008454365.11.7e-5077.78PREDICTED: protein GAMETE EXPRESSED 1 isoform X1 [Cucumis melo][more]
XP_016901473.11.7e-5077.78PREDICTED: protein GAMETE EXPRESSED 1 isoform X2 [Cucumis melo][more]
XP_022935308.11.7e-5077.52protein GAMETE EXPRESSED 1 [Cucurbita moschata][more]
XP_022143299.12.3e-5080.62protein GAMETE EXPRESSED 1 [Momordica charantia] >XP_022143300.1 protein GAMETE ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S4DZR5|A0A1S4DZR5_CUCME1.1e-5077.78protein GAMETE EXPRESSED 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494785 PE... [more]
tr|A0A1S3BZN2|A0A1S3BZN2_CUCME1.1e-5077.78protein GAMETE EXPRESSED 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494785 PE... [more]
tr|A0A0A0KT36|A0A0A0KT36_CUCSA2.0e-5077.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001620 PE=4 SV=1[more]
tr|A0A0A0L6W7|A0A0A0L6W7_CUCSA3.8e-4677.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G194400 PE=4 SV=1[more]
tr|A0A2I4EBQ9|A0A2I4EBQ9_9ROSI7.0e-4063.08protein GAMETE EXPRESSED 1 OS=Juglans regia OX=51240 GN=LOC108988149 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|Q681K7|GEX1_ARATH6.5e-2548.89Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana OX=3702 GN=GEX1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT5G55490.13.6e-2648.89gamete expressed protein 1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048856 anatomical structure development
biological_process GO:0007275 multicellular organism development
biological_process GO:0048229 gametophyte development
biological_process GO:0009790 embryo development
biological_process GO:0009553 embryo sac development
biological_process GO:0009555 pollen development
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0042802 identical protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G092880.1Cla97C05G092880.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33538:SF2PROTEIN GAMETE EXPRESSED 1coord: 28..151
NoneNo IPR availablePANTHERPTHR33538FAMILY NOT NAMEDcoord: 28..151

The following gene(s) are paralogous to this gene:

None