Cla97C05G087590 (gene) Watermelon (97103) v2

NameCla97C05G087590
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 5782202 .. 5782591 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGTTAGAAAAGAAGGTAAAGAAAATTGAGGCTCAATATATACAAAACCGTCAAAAGGAAAAAGCTAAAAAAGAAAGTCGTCAAATAATATTTTGTGAGGGTTCCTCTCCAATCAATAAGAAACTTGGATTTGAAGGAAAACCAAATGAGTTTGGATGCAATACCAACGAGAGCAAGATTTTGAATAAGTCAAAGAGAGAAGAACAAATTTGTAAAGTTCCATCTATGATCAATAATAAGAAGAAACAAAGCTTTGGAGGAACAACCAAACCTAGGCACAATACTAAGCCAAGCAAGATATGGAAGAAAGCAAAAAGAGAAGCGTTGCAGTGTATAGAGACGAAGAACCTAATGGCTTTTCGAAGAAATGTGATGCAAAAGTAG

mRNA sequence

ATGGAAGAGTTAGAAAAGAAGGTAAAGAAAATTGAGGCTCAATATATACAAAACCGTCAAAAGGAAAAAGCTAAAAAAGAAAGTCGTCAAATAATATTTTGTGAGGGTTCCTCTCCAATCAATAAGAAACTTGGATTTGAAGGAAAACCAAATGAGTTTGGATGCAATACCAACGAGAGCAAGATTTTGAATAAGTCAAAGAGAGAAGAACAAATTTGTAAAGTTCCATCTATGATCAATAATAAGAAGAAACAAAGCTTTGGAGGAACAACCAAACCTAGGCACAATACTAAGCCAAGCAAGATATGGAAGAAAGCAAAAAGAGAAGCGTTGCAGTGTATAGAGACGAAGAACCTAATGGCTTTTCGAAGAAATGTGATGCAAAAGTAG

Coding sequence (CDS)

ATGGAAGAGTTAGAAAAGAAGGTAAAGAAAATTGAGGCTCAATATATACAAAACCGTCAAAAGGAAAAAGCTAAAAAAGAAAGTCGTCAAATAATATTTTGTGAGGGTTCCTCTCCAATCAATAAGAAACTTGGATTTGAAGGAAAACCAAATGAGTTTGGATGCAATACCAACGAGAGCAAGATTTTGAATAAGTCAAAGAGAGAAGAACAAATTTGTAAAGTTCCATCTATGATCAATAATAAGAAGAAACAAAGCTTTGGAGGAACAACCAAACCTAGGCACAATACTAAGCCAAGCAAGATATGGAAGAAAGCAAAAAGAGAAGCGTTGCAGTGTATAGAGACGAAGAACCTAATGGCTTTTCGAAGAAATGTGATGCAAAAGTAG

Protein sequence

MEELEKKVKKIEAQYIQNRQKEKAKKESRQIIFCEGSSPINKKLGFEGKPNEFGCNTNESKILNKSKREEQICKVPSMINNKKKQSFGGTTKPRHNTKPSKIWKKAKREALQCIETKNLMAFRRNVMQK
BLAST of Cla97C05G087590 vs. NCBI nr
Match: XP_023526910.1 (uncharacterized protein LOC111790279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 7.9e-12
Identity = 56/128 (43.75%), Postives = 74/128 (57.81%), Query Frame = 0

Query: 2   EELEKKVKKIEAQYIQNRQKEKAKKESRQIIFCEGSSPINKKLGFEGKPNEFGCNTNESK 61
           +ELE+K  +IE +YIQN   EKA+K+SRQ+  CE S P                    SK
Sbjct: 95  KELEEKAVEIEKRYIQNCHNEKARKQSRQVKICEISPP-------------------SSK 154

Query: 62  ILNKSKREEQICKVPSMINNKKKQSFGGTTKPRHNTKPSKIWKKAKREALQCIETKNLMA 121
           +L K K + ++C+V S+ NNK+    GGT         SKI KKA++E LQ IETKN +A
Sbjct: 155 VLKKPKVQTKVCQVSSVTNNKRSY-VGGT---------SKILKKARKETLQSIETKNAIA 193

Query: 122 FRRNVMQK 130
           FRRN +QK
Sbjct: 215 FRRNAVQK 193

BLAST of Cla97C05G087590 vs. NCBI nr
Match: XP_022979571.1 (uncharacterized protein LOC111479252 [Cucurbita maxima])

HSP 1 Score: 76.6 bits (187), Expect = 6.7e-11
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 0

Query: 1   MEELEKKVKKIEAQYIQNRQKEKAKKESRQIIFCEGSSPINKKLGFEGKPNEFGCNTNES 60
           ++ELE K  ++E +YI+N Q EKA+K+SRQ+  CE S                      S
Sbjct: 94  IKELEDKAVEVEKRYIRNCQNEKARKQSRQVKICEISP--------------------SS 153

Query: 61  KILNKSKREEQICKVPSMINNKKKQSFGGTTKPRHNTKPSKIWKKAKREALQCIETKNLM 120
           K+L K K   ++C+V S  NN K+   GGT         SKI KKA++E LQ IETKNL+
Sbjct: 154 KVLKKPKVHTKVCQV-SSANNNKRSYLGGT---------SKILKKARKETLQSIETKNLI 192

Query: 121 AFRRNVMQK 130
           AFRRN +QK
Sbjct: 214 AFRRNAIQK 192

BLAST of Cla97C05G087590 vs. NCBI nr
Match: XP_022979565.1 (uncharacterized protein LOC111479243 [Cucurbita maxima])

HSP 1 Score: 76.6 bits (187), Expect = 6.7e-11
Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 0

Query: 1   MEELEKKVKKIEAQYIQNRQKEKAKKESRQIIFCEGSSPINKKLGFEGKPNEFGCNTNES 60
           ++ELE+K  +IE +YIQN Q EKA+K+SRQ+  CE S                      S
Sbjct: 94  IKELEEKAVEIEKRYIQNCQNEKARKQSRQVKICEISP--------------------SS 153

Query: 61  KILNKSKREEQICKVPSMINNKKKQSFGGTTKPRHNTKPSKIWKKAKREALQCIETKNLM 120
           K+L KSK   + C+V S  +N K+   GGT         SKI KKA++E LQ IETKN++
Sbjct: 154 KVLKKSKVHTKFCQV-SSAHNDKRSYLGGT---------SKILKKARKETLQSIETKNVI 192

Query: 121 AFRRNVMQK 130
           AFRRN +QK
Sbjct: 214 AFRRNTVQK 192

BLAST of Cla97C05G087590 vs. TrEMBL
Match: tr|A0A0A0KJR8|A0A0A0KJR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511010 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.9e-04
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0

Query: 1   MEELEKKVKKIEAQYIQNRQKEKAKKESRQIIFC-EGSSPINKKLGFEGKPNEFGCNTNE 60
           M+ELE + KKIE + IQ+ QKEKA+K+SRQI+FC    S ++ K     +   F  NT +
Sbjct: 100 MKELENRAKKIEDRIIQSYQKEKARKQSRQIVFCGSEDSLLSNKNPKSNRTVGFKSNTTK 159

Query: 61  SKILNKSKREEQICKVPSMINNK 83
           S  L K+KRE  + KV +  N +
Sbjct: 160 SVTLKKAKRELHVPKVSTSSNKE 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023526910.17.9e-1243.75uncharacterized protein LOC111790279 [Cucurbita pepo subsp. pepo][more]
XP_022979571.16.7e-1142.64uncharacterized protein LOC111479252 [Cucurbita maxima][more]
XP_022979565.16.7e-1143.41uncharacterized protein LOC111479243 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
tr|A0A0A0KJR8|A0A0A0KJR8_CUCSA6.9e-0443.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511010 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G087590.1Cla97C05G087590.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..96

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G087590Watermelon (97103) v2wmbwmbB137
Cla97C05G087590Watermelon (97103) v2wmbwmbB155
Cla97C05G087590Silver-seed gourdcarwmbB0069
Cla97C05G087590Silver-seed gourdcarwmbB0113
Cla97C05G087590Silver-seed gourdcarwmbB0631
Cla97C05G087590Silver-seed gourdcarwmbB0734
Cla97C05G087590Silver-seed gourdcarwmbB0867
Cla97C05G087590Cucumber (Gy14) v2cgybwmbB061
Cla97C05G087590Cucumber (Gy14) v2cgybwmbB196
Cla97C05G087590Cucumber (Gy14) v2cgybwmbB510
Cla97C05G087590Cucumber (Gy14) v1cgywmbB452
Cla97C05G087590Cucurbita maxima (Rimu)cmawmbB009
Cla97C05G087590Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G087590Cucurbita maxima (Rimu)cmawmbB366
Cla97C05G087590Cucurbita maxima (Rimu)cmawmbB368
Cla97C05G087590Cucurbita maxima (Rimu)cmawmbB856
Cla97C05G087590Cucurbita maxima (Rimu)cmawmbB914
Cla97C05G087590Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G087590Cucurbita moschata (Rifu)cmowmbB351
Cla97C05G087590Cucurbita moschata (Rifu)cmowmbB353
Cla97C05G087590Cucurbita moschata (Rifu)cmowmbB833
Cla97C05G087590Cucurbita moschata (Rifu)cmowmbB887
Cla97C05G087590Wild cucumber (PI 183967)cpiwmbB066
Cla97C05G087590Wild cucumber (PI 183967)cpiwmbB209
Cla97C05G087590Wild cucumber (PI 183967)cpiwmbB564
Cla97C05G087590Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G087590Cucumber (Chinese Long) v2cuwmbB064
Cla97C05G087590Cucumber (Chinese Long) v2cuwmbB204
Cla97C05G087590Cucumber (Chinese Long) v2cuwmbB539
Cla97C05G087590Bottle gourd (USVL1VR-Ls)lsiwmbB015
Cla97C05G087590Bottle gourd (USVL1VR-Ls)lsiwmbB188
Cla97C05G087590Bottle gourd (USVL1VR-Ls)lsiwmbB330
Cla97C05G087590Melon (DHL92) v3.6.1medwmbB114
Cla97C05G087590Melon (DHL92) v3.6.1medwmbB246
Cla97C05G087590Melon (DHL92) v3.6.1medwmbB423
Cla97C05G087590Melon (DHL92) v3.5.1mewmbB123
Cla97C05G087590Melon (DHL92) v3.5.1mewmbB260
Cla97C05G087590Melon (DHL92) v3.5.1mewmbB434
Cla97C05G087590Watermelon (Charleston Gray)wcgwmbB022
Cla97C05G087590Watermelon (Charleston Gray)wcgwmbB189
Cla97C05G087590Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G087590Watermelon (Charleston Gray)wcgwmbB269
Cla97C05G087590Watermelon (97103) v1wmwmbB027
Cla97C05G087590Watermelon (97103) v1wmwmbB136
Cla97C05G087590Watermelon (97103) v1wmwmbB206
Cla97C05G087590Watermelon (97103) v1wmwmbB402
Cla97C05G087590Wax gourdwgowmbB079
Cla97C05G087590Wax gourdwgowmbB178