Cla97C05G083370 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G083370
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ribosomal protein L18/L5
Location	Cla97Chr05 : 2574329 .. 2574634 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATGAGACCATTTGTTTTAGATGTTTATTTTTCAAGGAGGTTCATCCATGCCAAAGTGATGCATCGAGGAACAAGCAAGGTTGTTTCGGCAGCAAGCACTAATTGCAAGGATTTAAGGTATTCATTACCATCACCAACTGATGACAATGCCTGTAGGATTATTGGGAACCTAATTGCTGAGAGATGTAAAGAAGCCGATGTGTTTGTACTGTCTTATGACCCTCCAAACATGGAAAGAATTCAAGGCAAAATTGGGATTGTAATTGATACTATTAAGGAGAATGGTATTCTATTCGTCTAG

mRNA sequence

ATGTACATGAGACCATTTGTTTTAGATGTTTATTTTTCAAGGAGGTTCATCCATGCCAAAGTGATGCATCGAGGAACAAGCAAGGTTGTTTCGGCAGCAAGCACTAATTGCAAGGATTTAAGGTATTCATTACCATCACCAACTGATGACAATGCCTGTAGGATTATTGGGAACCTAATTGCTGAGAGATGTAAAGAAGCCGATGTGTTTGTACTGTCTTATGACCCTCCAAACATGGAAAGAATTCAAGGCAAAATTGGGATTGTAATTGATACTATTAAGGAGAATGGTATTCTATTCGTCTAG

Coding sequence (CDS)

ATGTACATGAGACCATTTGTTTTAGATGTTTATTTTTCAAGGAGGTTCATCCATGCCAAAGTGATGCATCGAGGAACAAGCAAGGTTGTTTCGGCAGCAAGCACTAATTGCAAGGATTTAAGGTATTCATTACCATCACCAACTGATGACAATGCCTGTAGGATTATTGGGAACCTAATTGCTGAGAGATGTAAAGAAGCCGATGTGTTTGTACTGTCTTATGACCCTCCAAACATGGAAAGAATTCAAGGCAAAATTGGGATTGTAATTGATACTATTAAGGAGAATGGTATTCTATTCGTCTAG

Protein sequence

MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV

Homology

[Close]

BLAST of Cla97C05G083370 vs. NCBI nr
Match: XP_011650830.1 (PREDICTED: 39S ribosomal protein L18, mitochondrial [Cucumis sativus] >KGN56667.1 hypothetical protein Csa_3G127780 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 9.2e-48
Identity = 95/101 (94.06%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI
Sbjct: 86  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 145

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVF +SYDPP+MERIQ K+GIVIDTIKENGI+FV
Sbjct: 146 AERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGIIFV 186

[Close]

BLAST of Cla97C05G083370 vs. NCBI nr
Match: XP_008438261.1 (PREDICTED: 50S ribosomal protein L18-like [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 2.7e-47
Identity = 94/101 (93.07%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSP+DDNACRIIGNLI
Sbjct: 85  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPSDDNACRIIGNLI 144

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVF +SYDPP+MERIQ K+GIVIDTIKENGI+FV
Sbjct: 145 AERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGIIFV 185

[Close]

BLAST of Cla97C05G083370 vs. NCBI nr
Match: XP_022937699.1 (uncharacterized protein LOC111444022 [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI
Sbjct: 91  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 150

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVFV+SYDPP   +I+GKI IVID IK+NGILFV
Sbjct: 151 AERCKEADVFVISYDPPKSAKIEGKIEIVIDAIKDNGILFV 191

[Close]

BLAST of Cla97C05G083370 vs. NCBI nr
Match: XP_022974777.1 (uncharacterized protein LOC111473501 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI
Sbjct: 49  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 108

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVFV+SYDPP   +I+GKI IVID IK+NGILFV
Sbjct: 109 AERCKEADVFVISYDPPKSAKIEGKIEIVIDAIKDNGILFV 149

[Close]

BLAST of Cla97C05G083370 vs. NCBI nr
Match: XP_022974979.1 (uncharacterized protein LOC111473828 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI
Sbjct: 89  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 148

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVFV+SYDPP   +I+GKI IVID IK+NGILFV
Sbjct: 149 AERCKEADVFVISYDPPKSAKIEGKIEIVIDAIKDNGILFV 189

[Close]

BLAST of Cla97C05G083370 vs. TrEMBL
Match: tr|A0A0A0L7S5|A0A0A0L7S5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127780 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.1e-48
Identity = 95/101 (94.06%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI
Sbjct: 86  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 145

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVF +SYDPP+MERIQ K+GIVIDTIKENGI+FV
Sbjct: 146 AERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGIIFV 186

[Close]

BLAST of Cla97C05G083370 vs. TrEMBL
Match: tr|A0A1S3AVM4|A0A1S3AVM4_CUCME (50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103483425 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 94/101 (93.07%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSP+DDNACRIIGNLI
Sbjct: 85  MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPSDDNACRIIGNLI 144

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCKEADVF +SYDPP+MERIQ K+GIVIDTIKENGI+FV
Sbjct: 145 AERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGIIFV 185

[Close]

BLAST of Cla97C05G083370 vs. TrEMBL
Match: tr|M5XKK2|M5XKK2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019075mg PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.7e-38
Identity = 76/101 (75.25%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPF+LDV+FS+RFIHAKVMHRGTSKV+S ASTN KDLRYSL S  D++ACR+IGNLI
Sbjct: 126 MYMRPFLLDVFFSKRFIHAKVMHRGTSKVISVASTNSKDLRYSLTSLVDNDACRVIGNLI 185

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCK+ADVF +S++P   ERI+G++GIV+DTIKENGI+FV
Sbjct: 186 AERCKDADVFAMSFEPKKNERIEGRLGIVLDTIKENGIMFV 226

[Close]

BLAST of Cla97C05G083370 vs. TrEMBL
Match: tr|A0A251QFL7|A0A251QFL7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G113900 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.7e-38
Identity = 76/101 (75.25%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPF+LDV+FS+RFIHAKVMHRGTSKV+S ASTN KDLRYSL S  D++ACR+IGNLI
Sbjct: 81  MYMRPFLLDVFFSKRFIHAKVMHRGTSKVISVASTNSKDLRYSLTSLVDNDACRVIGNLI 140

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AERCK+ADVF +S++P   ERI+G++GIV+DTIKENGI+FV
Sbjct: 141 AERCKDADVFAMSFEPKKNERIEGRLGIVLDTIKENGIMFV 181

[Close]

BLAST of Cla97C05G083370 vs. TrEMBL
Match: tr|A0A2P4N683|A0A2P4N683_QUESU (50s ribosomal protein l18 OS=Quercus suber OX=58331 GN=CFP56_48308 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-37
Identity = 77/101 (76.24%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           M+MRPF+L+V+FS+RFIHAKVMHRGTSKV+S A+TN KDLRYSLPS TD NACR++G LI
Sbjct: 149 MFMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLRYSLPSLTDHNACRVVGQLI 208

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AER KEADVF +SY+P   ERI+GK+GIVIDTIKENGI+FV
Sbjct: 209 AERSKEADVFAMSYEPRKDERIEGKLGIVIDTIKENGIIFV 249

[Close]

BLAST of Cla97C05G083370 vs. Swiss-Prot
Match: sp|Q5P316|RL18_AROAE (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-07
Identity = 30/93 (32.26%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 8   LDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERCKEA 67
           L V+ +   I+A+V+    S+V++AAST   D+R  LP+  +  A +++G LIAER K A
Sbjct: 26  LTVFRTNSHIYAQVIDGSGSRVLAAASTVEADVRSQLPNGGNKQAAQVVGKLIAERAKAA 85

Query: 68  DVFVLSYDPPNMERIQGKIGIVIDTIKENGILF 101
            V  +++D    +   G++  + +  +E G+ F
Sbjct: 86  GVEAVAFDRAGFQ-YHGRVKALAEAAREGGLKF 117

[Close]

BLAST of Cla97C05G083370 vs. Swiss-Prot
Match: sp|B5ZYV1|RL18_RHILW (50S ribosomal protein L18 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) OX=395492 GN=rplR PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-06
Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 8   LDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERCKEA 67
           L V+ S + I+A+V+     K ++AAST  KDLR SL +  D  A  ++G L+AER  +A
Sbjct: 29  LSVHRSSKNIYAQVIDDVAGKTLAAASTLDKDLRGSLKTGADTAAAALVGKLVAERASKA 88

Query: 68  DVFVLSYDPPNMERIQGKIGIVIDTIKENGILF 101
            V  + +D        G+I  + D  +E G+ F
Sbjct: 89  GVTDVVFD-RGAFIYHGRIKALADAAREGGLTF 120

[Close]

BLAST of Cla97C05G083370 vs. Swiss-Prot
Match: sp|A9BG02|RL18_PETMO (50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=403833 GN=rplR PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-06
Identity = 27/93 (29.03%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 8   LDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERCKEA 67
           L V+ S++ I+A+++       +++AST  K L+  L    D+NA + +G LIAE+ KE 
Sbjct: 31  LTVFKSQKHIYAQIIDDTKGVTLASASTTQKQLKEKLEKTWDENAAKEVGKLIAEKAKEK 90

Query: 68  DVFVLSYDPPNMERIQGKIGIVIDTIKENGILF 101
            +  + +D     +  GK+  + +  +E G+ F
Sbjct: 91  GITEIVFDRSGY-KYHGKVKALAEAARETGLKF 122

[Close]

BLAST of Cla97C05G083370 vs. Swiss-Prot
Match: sp|Q11HR8|RL18_CHESB (50S ribosomal protein L18 OS=Chelativorans sp. (strain BNC1) OX=266779 GN=rplR PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05
Identity = 31/93 (33.33%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 8   LDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERCKEA 67
           L VY S + I+A+V+       ++AAS+  KDLR  L +  D +A  ++G LIAER K+A
Sbjct: 28  LSVYRSSKHIYAQVIDDVKGHTLAAASSLDKDLREKLKTGADVDAAGVVGKLIAERAKKA 87

Query: 68  DVFVLSYDPPNMERIQGKIGIVIDTIKENGILF 101
            +  + +D        G++  + D  +E G+ F
Sbjct: 88  GIDKVVFD-RGPYIYHGRVKALADAAREGGLEF 119

[Close]

BLAST of Cla97C05G083370 vs. Swiss-Prot
Match: sp|B0U0X3|RL18_FRAP2 (50S ribosomal protein L18 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) OX=484022 GN=rplR PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05
Identity = 28/93 (30.11%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 8   LDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERCKEA 67
           L VY + R ++A+V+    S V++AAST  KD++       + N+  I+G +IA RCKE 
Sbjct: 26  LCVYRTPRHVYAQVISGDGSTVLAAASTVEKDVKAKCKYTGNVNSAAIVGEVIANRCKEK 85

Query: 68  DVFVLSYDPPNMERIQGKIGIVIDTIKENGILF 101
            +  +++D     +  G++  + +  +E+G+ F
Sbjct: 86  GISQVAFDRSGY-KYHGRVKALAEAAREHGLQF 117

[Close]

BLAST of Cla97C05G083370 vs. TAIR10
Match: AT3G20230.1 (Ribosomal L18p/L5e family protein)

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-35
Identity = 68/101 (67.33%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLI 60
           MYMRPF+L+V+FSR+FIHAKVMHR TSKV+S A+TN +D+R ++PS  D+ ACR+IG LI
Sbjct: 86  MYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLI 145

Query: 61  AERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGILFV 102
           AER  EADV+ +SY+P   ERI+GK+GIVIDTIKE+GI+FV
Sbjct: 146 AERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGIIFV 186

[Close]

BLAST of Cla97C05G083370 vs. TAIR10
Match: AT1G08845.2 (Ribosomal L18p/L5e family protein)

HSP 1 Score: 94.4 bits (233), Expect = 4.4e-20
Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 2   YMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIA 61
           YM PF LDV+ S+RF+ A + HR T + V+ A TN KD++  L S  D  AC  IG +++
Sbjct: 131 YMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPACMSIGRILS 190

Query: 62  ERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGI 99
           ER KEADV+  SY P + ++ +GKI  V+ ++ +NGI
Sbjct: 191 ERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 227

[Close]

BLAST of Cla97C05G083370 vs. TAIR10
Match: AT3G22450.1 (Ribosomal L18p/L5e family protein)

HSP 1 Score: 77.0 bits (188), Expect = 7.3e-15
Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 5   PFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIAERC 64
           PF LD+Y S+  + A V+HR TSKVV+ A +  KD+++ L S  +  AC  +G ++A+R 
Sbjct: 197 PFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRS 256

Query: 65  KEADVFVLSYDPPNMERIQGKIGIVIDTIKENGI 99
            E D+  + Y P   ++I+GK+ +V+  + +NG+
Sbjct: 257 LEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGV 290

[Close]

BLAST of Cla97C05G083370 vs. TAIR10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein)

HSP 1 Score: 67.8 bits (164), Expect = 4.4e-12
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 2   YMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNACRIIGNLIA 61
           Y++P+VL ++F+ +F+HA+V+H  T+ V  +AS+  K LR ++    D  A   IG ++ 
Sbjct: 15  YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74

Query: 62  ERCKEADVFVLSYDPPNMERIQGKIGIVIDTIKENGI 99
           ER    D+  ++      +R  GK+  VID+++E G+
Sbjct: 75  ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGV 111

The following BLAST results are available for this feature:

BLAST of Cla97C05G083370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650830.1	9.2e-48	94.06	PREDICTED: 39S ribosomal protein L18, mitochondrial [Cucumis sativus] >KGN56667....	[more]
XP_008438261.1	2.7e-47	93.07	PREDICTED: 50S ribosomal protein L18-like [Cucumis melo]	[more]
XP_022937699.1	2.5e-45	91.09	uncharacterized protein LOC111444022 [Cucurbita moschata]	[more]
XP_022974777.1	2.5e-45	91.09	uncharacterized protein LOC111473501 [Cucurbita maxima]	[more]
XP_022974979.1	2.5e-45	91.09	uncharacterized protein LOC111473828 [Cucurbita maxima]	[more]

BLAST of Cla97C05G083370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7S5\|A0A0A0L7S5_CUCSA	6.1e-48	94.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127780 PE=4 SV=1	[more]
tr\|A0A1S3AVM4\|A0A1S3AVM4_CUCME	1.8e-47	93.07	50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103483425 PE=4 SV=1	[more]
tr\|M5XKK2\|M5XKK2_PRUPE	9.7e-38	75.25	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019075mg PE=4 SV=1	[more]
tr\|A0A251QFL7\|A0A251QFL7_PRUPE	9.7e-38	75.25	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G113900 PE=4 SV=1	[more]
tr\|A0A2P4N683\|A0A2P4N683_QUESU	2.2e-37	76.24	50s ribosomal protein l18 OS=Quercus suber OX=58331 GN=CFP56_48308 PE=4 SV=1	[more]

BLAST of Cla97C05G083370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5P316\|RL18_AROAE	7.0e-07	32.26	50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rp...	[more]
sp\|B5ZYV1\|RL18_RHILW	3.5e-06	35.48	50S ribosomal protein L18 OS=Rhizobium leguminosarum bv. trifolii (strain WSM230...	[more]
sp\|A9BG02\|RL18_PETMO	5.9e-06	29.03	50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=4038...	[more]
sp\|Q11HR8\|RL18_CHESB	1.0e-05	33.33	50S ribosomal protein L18 OS=Chelativorans sp. (strain BNC1) OX=266779 GN=rplR P...	[more]
sp\|B0U0X3\|RL18_FRAP2	1.0e-05	30.11	50S ribosomal protein L18 OS=Francisella philomiragia subsp. philomiragia (strai...	[more]

BLAST of Cla97C05G083370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20230.1	1.3e-35	67.33	Ribosomal L18p/L5e family protein	[more]
AT1G08845.2	4.4e-20	45.36	Ribosomal L18p/L5e family protein	[more]
AT3G22450.1	7.3e-15	37.23	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	4.4e-12	32.99	Ribosomal L18p/L5e family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR005484	Ribosomal_L18

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008097	5S rRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G083370.1	Cla97C05G083370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 7..100 e-value: 9.1E-10 score: 38.8
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 1..101
None	No IPR available	GENE3D	G3DSA:3.30.420.100		coord: 3..100 e-value: 6.5E-15 score: 57.6
None	No IPR available	PANTHER	PTHR12899:SF7	SUBFAMILY NOT NAMED	coord: 1..101
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 2..98 e-value: 5.72259E-18 score: 72.1875
None	No IPR available	SUPERFAMILY	SSF53137	Translational machinery components	coord: 4..98

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G083370	Csa3G127780	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G083370	MELO3C006255	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G083370	CSPI03G10180	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G083370	Cucsa.257030	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G083370	CmaCh06G011690	Cucurbita maxima (Rimu)	cmawmbB856
Cla97C05G083370	Lsi05G019020	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G083370	CsGy3G010290	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G083370	MELO3C006255.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G083370	Carg06339	Silver-seed gourd	carwmbB1008
Cla97C05G083370	CsaV3_3G010320	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G083370	Bhi01G000104	Wax gourd	wgowmbB180

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G083370	Watermelon (97103) v2	wmbwmbB054
Cla97C05G083370	Watermelon (97103) v2	wmbwmbB131
Cla97C05G083370	Silver-seed gourd	carwmbB0229
Cla97C05G083370	Silver-seed gourd	carwmbB0647
Cla97C05G083370	Silver-seed gourd	carwmbB0818
Cla97C05G083370	Silver-seed gourd	carwmbB1130
Cla97C05G083370	Cucumber (Gy14) v2	cgybwmbB204
Cla97C05G083370	Cucumber (Gy14) v2	cgybwmbB437
Cla97C05G083370	Cucumber (Gy14) v1	cgywmbB542
Cla97C05G083370	Cucumber (Gy14) v1	cgywmbB622
Cla97C05G083370	Cucurbita maxima (Rimu)	cmawmbB005
Cla97C05G083370	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G083370	Cucurbita maxima (Rimu)	cmawmbB366
Cla97C05G083370	Cucurbita maxima (Rimu)	cmawmbB858
Cla97C05G083370	Cucurbita maxima (Rimu)	cmawmbB916
Cla97C05G083370	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G083370	Cucurbita moschata (Rifu)	cmowmbB350
Cla97C05G083370	Cucurbita moschata (Rifu)	cmowmbB626
Cla97C05G083370	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G083370	Cucurbita moschata (Rifu)	cmowmbB890
Cla97C05G083370	Wild cucumber (PI 183967)	cpiwmbB215
Cla97C05G083370	Wild cucumber (PI 183967)	cpiwmbB485
Cla97C05G083370	Cucumber (Chinese Long) v3	cucwmbB214
Cla97C05G083370	Cucumber (Chinese Long) v3	cucwmbB478
Cla97C05G083370	Cucumber (Chinese Long) v2	cuwmbB212
Cla97C05G083370	Cucumber (Chinese Long) v2	cuwmbB460
Cla97C05G083370	Bottle gourd (USVL1VR-Ls)	lsiwmbB020
Cla97C05G083370	Bottle gourd (USVL1VR-Ls)	lsiwmbB337
Cla97C05G083370	Melon (DHL92) v3.6.1	medwmbB116
Cla97C05G083370	Melon (DHL92) v3.6.1	medwmbB327
Cla97C05G083370	Melon (DHL92) v3.5.1	mewmbB125
Cla97C05G083370	Melon (DHL92) v3.5.1	mewmbB340
Cla97C05G083370	Watermelon (Charleston Gray)	wcgwmbB020
Cla97C05G083370	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G083370	Watermelon (Charleston Gray)	wcgwmbB264
Cla97C05G083370	Watermelon (97103) v1	wmwmbB206
Cla97C05G083370	Watermelon (97103) v1	wmwmbB398
Cla97C05G083370	Wax gourd	wgowmbB041
Cla97C05G083370	Wax gourd	wgowmbB080