Cla97C03G067110 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G067110
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr03 : 30596869 .. 30597357 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAATCGAGAATGCAAGTTCCAATTCTTCGATATATTTTACCAAATCTTCCATTTCATTATGAGAATCCTATCATCTAAAGCTCAAGAAACTGTTGTTCTTGGAAACCCGGTGTCGCATGAATCGAACGCTTCATCTCAAGAGCTCACAACTACTTTGAATTCAGAGCATTCTGCTTTGTCTCTCACGAACGGTCATCTCGAAGAACCAAAGGAGCTCGATTTGAGAAAAGAAAATGATAAGAATAATGATGATTTTGTATCGTTGCCTTCTACAACAAAACGAGCTCCAAAGAAAATTGTTAGTATCAATGAAAGAGTTGAGGATATTGATGCTATTATGAAGGAAAGGAGGAAGAGAAAAGGAACAAAGAAGTCAAAATCCTTTGATTTTGATAATGGATATGATGCTTCTTTAAAGCCTACTCGCTCCATTCTCAAGGTTGGCTCAATAAGAGATAACTCAGATTTATTAAAAACTCTTTGA

mRNA sequence

ATGGACAATCGAGAATGCAAGTTCCAATTCTTCGATATATTTTACCAAATCTTCCATTTCATTATGAGAATCCTATCATCTAAAGCTCAAGAAACTGTTGTTCTTGGAAACCCGGTGTCGCATGAATCGAACGCTTCATCTCAAGAGCTCACAACTACTTTGAATTCAGAGCATTCTGCTTTGTCTCTCACGAACGGTCATCTCGAAGAACCAAAGGAGCTCGATTTGAGAAAAGAAAATGATAAGAATAATGATGATTTTGTATCGTTGCCTTCTACAACAAAACGAGCTCCAAAGAAAATTGTTAGTATCAATGAAAGAGTTGAGGATATTGATGCTATTATGAAGGAAAGGAGGAAGAGAAAAGGAACAAAGAAGTCAAAATCCTTTGATTTTGATAATGGATATGATGCTTCTTTAAAGCCTACTCGCTCCATTCTCAAGGTTGGCTCAATAAGAGATAACTCAGATTTATTAAAAACTCTTTGA

Coding sequence (CDS)

ATGGACAATCGAGAATGCAAGTTCCAATTCTTCGATATATTTTACCAAATCTTCCATTTCATTATGAGAATCCTATCATCTAAAGCTCAAGAAACTGTTGTTCTTGGAAACCCGGTGTCGCATGAATCGAACGCTTCATCTCAAGAGCTCACAACTACTTTGAATTCAGAGCATTCTGCTTTGTCTCTCACGAACGGTCATCTCGAAGAACCAAAGGAGCTCGATTTGAGAAAAGAAAATGATAAGAATAATGATGATTTTGTATCGTTGCCTTCTACAACAAAACGAGCTCCAAAGAAAATTGTTAGTATCAATGAAAGAGTTGAGGATATTGATGCTATTATGAAGGAAAGGAGGAAGAGAAAAGGAACAAAGAAGTCAAAATCCTTTGATTTTGATAATGGATATGATGCTTCTTTAAAGCCTACTCGCTCCATTCTCAAGGTTGGCTCAATAAGAGATAACTCAGATTTATTAAAAACTCTTTGA

Protein sequence

MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTTLNSEHSALSLTNGHLEEPKELDLRKENDKNNDDFVSLPSTTKRAPKKIVSINERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGSIRDNSDLLKTL

Homology

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BLAST of Cla97C03G067110 vs. NCBI nr
Match: KGN66104.1 (hypothetical protein Csa_1G570780 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 6.6e-56
Identity = 129/188 (68.62%), Postives = 139/188 (73.94%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTTLNSEHSA 60
           MDNR+ KFQFFDIFYQIFHFIMRILSSKA+E V LGN V HE NASS ELTT+ NSEHS 
Sbjct: 1   MDNRQSKFQFFDIFYQIFHFIMRILSSKAREIVTLGNSVPHEPNASSHELTTSSNSEHST 60

Query: 61  LSLTNGHLEEPK---------------------------ELDLRKENDKNNDDFVSLPST 120
            SLTN HL+E                              +DLRKENDK +DDFVSLPST
Sbjct: 61  SSLTNDHLKETNXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLRKENDKKSDDFVSLPST 120

Query: 121 TKRAPKKIVSINERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGSIR 162
           TKRAPKK+VSINERVEDID+IMKERRK+KG  KSKSFDFDN YDASLKP RSILKVGSI+
Sbjct: 121 TKRAPKKMVSINERVEDIDSIMKERRKKKGI-KSKSFDFDNEYDASLKPIRSILKVGSIK 180

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BLAST of Cla97C03G067110 vs. NCBI nr
Match: XP_022159281.1 (uncharacterized protein LOC111025690 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 113/196 (57.65%), Postives = 128/196 (65.31%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNA--------------- 60
           MDN ECKFQ FDI Y++FHF+M+ILSSKAQETV LG   S ESNA               
Sbjct: 1   MDNGECKFQLFDICYRLFHFLMKILSSKAQETVTLGGSRSSESNASTLEVGLCSHHDENQ 60

Query: 61  --SSQELTTTLNSEHSALSLTNGHLEEPKELDLRKEN------DKNN----------DDF 120
             SSQE T  LNS+H   SLTN H E  KEL   +EN      DKN+          ++ 
Sbjct: 61  DNSSQESTAKLNSDHPISSLTNDHQEGRKELHSIEENGSPRIEDKNDSNGNATQKVEEEG 120

Query: 121 VSLPSTTKRAPKKIVSINERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDASLKPTRSIL 163
           V LPS TK  PKKIVSI E VEDI++IM +RRK KGTKKSKSFDFDNGYD SLKP+RSIL
Sbjct: 121 VPLPSATKGPPKKIVSIKETVEDINSIMLQRRKSKGTKKSKSFDFDNGYDGSLKPSRSIL 180

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BLAST of Cla97C03G067110 vs. NCBI nr
Match: XP_022961566.1 (uncharacterized protein LOC111462109 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-24
Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 79  ENDKNNDDFVSLPSTTKRAPKKIVSINERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDA 138
           ++DKN+  FV LPST K APKKIVSI E VEDID+IMKERRK KGTKKSKSFDFDN YD 
Sbjct: 48  KSDKNH-HFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGTKKSKSFDFDNEYDG 107

Query: 139 SLKPTRSILKVGSIRDNSDLLKTL 163
           SLKPTRSILKVGS+ D SDLL +L
Sbjct: 108 SLKPTRSILKVGSLNDKSDLLNSL 130

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BLAST of Cla97C03G067110 vs. NCBI nr
Match: XP_006577258.1 (uncharacterized protein LOC100777942 [Glycine max] >KHN04018.1 hypothetical protein glysoja_022704 [Glycine soja] >KRH68598.1 hypothetical protein GLYMA_03G240500 [Glycine max])

HSP 1 Score: 62.0 bits (149), Expect = 2.1e-06
Identity = 54/154 (35.06%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTT---LNSE 60
           MD RE       I Y++++FIM+ L+S+A +TV LG    + S+++  E+T      N+E
Sbjct: 1   MDQRELN---LGICYRLYNFIMKTLASQAMKTVTLGRSSHYSSSSTEVEITQRGFGTNTE 60

Query: 61  HSALSLTNGHLEEPKELDLRKENDKNNDDFVSLPSTTKRAPKKIVSINERVEDIDAIMKE 120
              L+ T     E K +  R   + N D+ V +      APKK+VSIN+ VE+I  I+  
Sbjct: 61  KMVLAETPC---EEKNIPCR---NNNIDEKVLMVGDLPHAPKKMVSINDNVEEI--ILPS 120

Query: 121 RRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGS 152
           +++ K  ++S S D         KP RSILKVG+
Sbjct: 121 KKRSKTFQESNSLD----QQEHPKPLRSILKVGA 139

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BLAST of Cla97C03G067110 vs. NCBI nr
Match: XP_019428087.1 (PREDICTED: uncharacterized protein LOC109336135 isoform X1 [Lupinus angustifolius])

HSP 1 Score: 60.8 bits (146), Expect = 4.8e-06
Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTTLNSE--- 60
           MD RE   Q   I Y+++HFI + L+S+A +TV LG P  H S++S    T T +SE   
Sbjct: 1   MDPREFHLQPMGICYKLYHFIRKTLASQALKTVTLGGP-PHSSSSS----TATRDSEDYG 60

Query: 61  HSALSLTNGHLEEPKELDLRKEND--KNNDDFVSLPST---TKRAPKKIVSINERVEDID 120
           +  L  T+G+          K+N+   N D+  +   T     + PKK VSIN+ VE+I 
Sbjct: 61  NKELLPTHGNFLSSLAAQAEKKNNAFMNIDEIATKNMTCLSQAKPPKKTVSINDNVEEIA 120

Query: 121 AIMKERRKRKGTKKSKSFDFDNGYDASL----KPTRSILKVGS 152
              K++R      +SKSF              KP RSILKVGS
Sbjct: 121 PFNKKKR------RSKSFQXXXXXXXXXXXXPKPLRSILKVGS 152

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BLAST of Cla97C03G067110 vs. TrEMBL
Match: tr|A0A0A0LYJ0|A0A0A0LYJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570780 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.4e-56
Identity = 129/188 (68.62%), Postives = 139/188 (73.94%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTTLNSEHSA 60
           MDNR+ KFQFFDIFYQIFHFIMRILSSKA+E V LGN V HE NASS ELTT+ NSEHS 
Sbjct: 1   MDNRQSKFQFFDIFYQIFHFIMRILSSKAREIVTLGNSVPHEPNASSHELTTSSNSEHST 60

Query: 61  LSLTNGHLEEPK---------------------------ELDLRKENDKNNDDFVSLPST 120
            SLTN HL+E                              +DLRKENDK +DDFVSLPST
Sbjct: 61  SSLTNDHLKETNXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLRKENDKKSDDFVSLPST 120

Query: 121 TKRAPKKIVSINERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGSIR 162
           TKRAPKK+VSINERVEDID+IMKERRK+KG  KSKSFDFDN YDASLKP RSILKVGSI+
Sbjct: 121 TKRAPKKMVSINERVEDIDSIMKERRKKKGI-KSKSFDFDNEYDASLKPIRSILKVGSIK 180

[Close]

BLAST of Cla97C03G067110 vs. TrEMBL
Match: tr|I1JRF7|I1JRF7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777942 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-06
Identity = 54/154 (35.06%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTT---LNSE 60
           MD RE       I Y++++FIM+ L+S+A +TV LG    + S+++  E+T      N+E
Sbjct: 1   MDQRELN---LGICYRLYNFIMKTLASQAMKTVTLGRSSHYSSSSTEVEITQRGFGTNTE 60

Query: 61  HSALSLTNGHLEEPKELDLRKENDKNNDDFVSLPSTTKRAPKKIVSINERVEDIDAIMKE 120
              L+ T     E K +  R   + N D+ V +      APKK+VSIN+ VE+I  I+  
Sbjct: 61  KMVLAETPC---EEKNIPCR---NNNIDEKVLMVGDLPHAPKKMVSINDNVEEI--ILPS 120

Query: 121 RRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGS 152
           +++ K  ++S S D         KP RSILKVG+
Sbjct: 121 KKRSKTFQESNSLD----QQEHPKPLRSILKVGA 139

[Close]

BLAST of Cla97C03G067110 vs. TrEMBL
Match: tr|A0A151TW58|A0A151TW58_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010505 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06
Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTTLNSEHSA 60
           M+ RE      +I Y+++HFIM+ L+S+A +TV LG    H S+++  E+T        +
Sbjct: 1   MEQREL---HLNICYKLYHFIMKTLASQAMKTVTLGARSHHGSSSTEVEIT----QREES 60

Query: 61  LSLTNGHLEEPKELDLRKENDKNNDDFVSLPSTTKRAPKKIVSINERVEDIDAIMKERRK 120
           ++  N +++E    DL             LP    RAPKKIVSIN+ VE+I +       
Sbjct: 61  VACRNINIDENVVGDL-------------LP----RAPKKIVSINDNVEEIIS------- 116

Query: 121 RKGTKKSKSFDFDNGYDASLKPTRSILKVGS 152
             G K+SK F  D   D   KP RSILKVGS
Sbjct: 121 -TGKKRSKLF-MDQQEDP--KPLRSILKVGS 116

[Close]

BLAST of Cla97C03G067110 vs. TrEMBL
Match: tr|A0A067JHY1|A0A067JHY1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23389 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05
Identity = 59/178 (33.15%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNAS-------------- 60
           MD RE +FQ   I  ++++F+ + L+  A ++V LG+P+ H++ A               
Sbjct: 1   MDQREDQFQTKGICSRLYNFMTKTLAIYALKSVKLGHPL-HKNFARARTRPPCNSDLMVQ 60

Query: 61  --SQELT------TTLNSEHS-----ALSLTNGHLEEPKELDLRKENDKNNDDFVSLPST 120
             +QE T       TLN ++S       S  NG  +E KEL   +EN+ N +        
Sbjct: 61  PVTQEETPFEGVEQTLNIKNSDPFFPNSSSINGLKQEGKELQEVQENNSNFNG----EKI 120

Query: 121 TKRAPKKIVSINERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGS 152
             + PKK+VSIN+RVE+ID   K  R++K  +   SF+ +   +   KP +SILKVGS
Sbjct: 121 EAKVPKKVVSINDRVEEIDTSKKRIRRKKSKENLTSFEQE---EEEPKPLKSILKVGS 170

[Close]

BLAST of Cla97C03G067110 vs. TrEMBL
Match: tr|A0A1S3E330|A0A1S3E330_CICAR (uncharacterized protein LOC105851864 OS=Cicer arietinum OX=3827 GN=LOC105851864 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.5e-05
Identity = 51/166 (30.72%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 1   MDNRECKFQFFDIFYQIFHFIMRILSSKAQETVVLGNPVSHESNASSQELTTT--LNSEH 60
           MD RE   Q   I Y+++HFI + L+S+  +TV LG    + S +++   + T   +   
Sbjct: 1   MDQREIHLQNMGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGND 60

Query: 61  SALSLTNGHL----------EEPKELDLRKENDKNNDDFVSLPST---TKRAPKKIVSIN 120
              S T G L           + K+   +  ++K  ++  +LP+T    + + +K+VSIN
Sbjct: 61  KEFSHTQGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENTTTLPTTPLPKRISLRKVVSIN 120

Query: 121 ERVEDIDAIMKERRKRKGTKKSKSFDFDNGYDASLKPTRSILKVGS 152
           + VE+I    K +R+ K  +KS S D     +   +P RSILKVGS
Sbjct: 121 DNVEEILPGKKNKRRIKSFQKSSSLD----QEEEPEPLRSILKVGS 162

The following BLAST results are available for this feature:

BLAST of Cla97C03G067110 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66104.1	6.6e-56	68.62	hypothetical protein Csa_1G570780 [Cucumis sativus]	[more]
XP_022159281.1	1.6e-41	57.65	uncharacterized protein LOC111025690 [Momordica charantia]	[more]
XP_022961566.1	3.0e-24	77.38	uncharacterized protein LOC111462109 [Cucurbita moschata]	[more]
XP_006577258.1	2.1e-06	35.06	uncharacterized protein LOC100777942 [Glycine max] >KHN04018.1 hypothetical prot...	[more]
XP_019428087.1	4.8e-06	36.20	PREDICTED: uncharacterized protein LOC109336135 isoform X1 [Lupinus angustifoliu...	[more]

BLAST of Cla97C03G067110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYJ0\|A0A0A0LYJ0_CUCSA	4.4e-56	68.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570780 PE=4 SV=1	[more]
tr\|I1JRF7\|I1JRF7_SOYBN	1.4e-06	35.06	Uncharacterized protein OS=Glycine max OX=3847 GN=100777942 PE=4 SV=1	[more]
tr\|A0A151TW58\|A0A151TW58_CAJCA	7.0e-06	37.09	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010505 PE=4 SV=1	[more]
tr\|A0A067JHY1\|A0A067JHY1_JATCU	2.7e-05	33.15	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23389 PE=4 SV=1	[more]
tr\|A0A1S3E330\|A0A1S3E330_CICAR	3.5e-05	30.72	uncharacterized protein LOC105851864 OS=Cicer arietinum OX=3827 GN=LOC105851864 ...	[more]

BLAST of Cla97C03G067110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C03G067110 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G067110.1	Cla97C03G067110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..94

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G067110	Cla011324	Watermelon (97103) v1	wmwmbB125
Cla97C03G067110	Csa1G570780	Cucumber (Chinese Long) v2	cuwmbB042
Cla97C03G067110	MELO3C015344	Melon (DHL92) v3.5.1	mewmbB249
Cla97C03G067110	ClCG03G016780	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G067110	CSPI01G26860	Wild cucumber (PI 183967)	cpiwmbB043
Cla97C03G067110	CmaCh10G010640	Cucurbita maxima (Rimu)	cmawmbB061
Cla97C03G067110	CmoCh10G011440	Cucurbita moschata (Rifu)	cmowmbB048
Cla97C03G067110	MELO3C015344.2	Melon (DHL92) v3.6.1	medwmbB235
Cla97C03G067110	CsaV3_1G039200	Cucumber (Chinese Long) v3	cucwmbB041
Cla97C03G067110	Bhi02G001663	Wax gourd	wgowmbB632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G067110	Silver-seed gourd	carwmbB0576
Cla97C03G067110	Cucumber (Gy14) v2	cgybwmbB041
Cla97C03G067110	Cucumber (Gy14) v1	cgywmbB287
Cla97C03G067110	Cucurbita maxima (Rimu)	cmawmbB110
Cla97C03G067110	Cucurbita moschata (Rifu)	cmowmbB096
Cla97C03G067110	Bottle gourd (USVL1VR-Ls)	lsiwmbB365