Cla97C03G066810 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G066810
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	vesicle-associated protein 1-3-like
Location	Cla97Chr03 : 30344100 .. 30346045 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCATCGAGCCATTATCCACTTGTGAAGTCAGATGTATGCATCCCTTGCATTTAATTTATTACGTGATTTTTACGTTGTTACATTTTAATATAGTTATTGAGTTCGAATATTTAATCTATAAGATTGAGCCATTAATTATTAAGTACCACAATTACTGCCTTATATTATCTAGAAAACCTAACAACAAAAATTGATTCTAACTTAAAACTATTCCTACTCATAATTGAGTGGAGATCAAAATTAGAGAGGTGTCTTATAAAAGTAATTAATCAACAACCTTTATTAGAAAATCTCCAATCTCATATAAGATTCTATTGACACAAATCATGCATTTGCTATTGCAATCTAAAAAATCTTACTCTCTTGAGCTAAAACTTAAACTAAATAAACAATTAATTAAGATATGATAAATACATTCACACATTACGTCAAAATTCTAAGAACAAAGTTATACTACTCAAATTACCATGAAACTTAAAACCTATCTATCCCTCGCACGTGTGTGTGCGAGTCTAATTTTTTTTTTTCAAAGTTATTCATTGCATGATTTGTAAATATTCTTATGGTTTTTTTTTTCACCCTTATACTATTATTCATGATAAAATACCCAAGGGCAAATTGTTTTGGTCTCCGATGTTATGACTTATTGAAAGTTTCAATACTTAATTTGGACATTATATTCAATAGTATAGAGACTAAAATAAAACATACGTTCTATTTGTTATTCTTAATGTAGTTATTATGAAAGCACAAAGTATTCCTCCATCTGACATGACATGCAAAGACAAGTTCTTAATCCAAAGCACAATAGTTCCCATTGAGACAACTGTTGAAGATATAACTTCCAATAATGGCTTGGTAAATGTTTTTGACAGCTTTGTAATTTTAGTTGTTAGTCCTCATTTTTATATCATAATTATTAACTTACCATTTTGTCTTCAGTTTGGGAAAAATAGTAGCAAGAATATAGAAGAAAGGAAATTGGCTACAATTCTTGTTGTTAGGCCATCTAATTCCCCAACAATTGAAGCATTGAGTGTTGGAATTTCAGACCAAAGTAATGATAAGCAAATAGAGGAGTTGAAGTTAAAGAACAATGAACTTGATTTACAGCTCCATCAGGTTAGTCTTTCATAAAAGTTTTCTTCTATATTGTGAACTATTGACCAAAATAATTAATGTCCAATTTGATAACCATTTGGTTTTTGGTTTTCTGTTTTTAAAAGTCAAGTCTATAAACGCCACTTCTATCTATTGGTTTCTATATTTTGTTGCCTAGGTTTTTAAGGAGTGCCTTCAAAATAAAAATAAAAATTTGAAAACTAAGAAAAGAAAGCTCGTTCGGTAACTATTTGATTTTTAATTTTTTTTTTTGTTTTGAAAATTAAATTTATTTCCTATAGTTGTTTGCTTCTTTTTTAAGTAAAAGGGTTGGATTTTTAATCAAGTTCCAAAAATAACAACAAAGTTAAAATTTTTTTTTTTTTAGTTTTCAAAACTTAGTTTGTTTTTTTGAAAATATTAGTAAAAAGTAGATAACATAGTAAAAAAAAATTTAGAGGTAAAAAGGGCATTTTTATATATAGACTTAATTTTCAAAAACTAAAAGCAAAATGGTTATCAAATGGAGCTGTTTGTTTTAAAACTTTATTTTTGTTTTTAGAAATTGACTAAGAAGTCAAATGGAAAATATGAAAATCATGAGTAAGAAATTGTTAAAAACCAAACATAATTTTGAAAAACTAAAAACCAAGAATCAAATAGTTATTAAACCGGTCTAAATAATTTTAAGTATATTTTATTTTGCCAGATAGAAATGTGAATTGATCCTTCAAATTTCCTTTATTTACAGGCTCGGGTTGTTATTTCAAAGCTAGAAAAGGAGAGGACTCGCACTAAAAAAACCAAATCCTTCCAAAAGAATTGCACAATTCTTTGA

mRNA sequence

ATGGGTATCATCGAGCCATTATCCACTTGTGAAGTCAGATTTATTATGAAAGCACAAAGTATTCCTCCATCTGACATGACATGCAAAGACAAGTTCTTAATCCAAAGCACAATAGTTCCCATTGAGACAACTGTTGAAGATATAACTTCCAATAATGGCTTGTTTGGGAAAAATAGTAGCAAGAATATAGAAGAAAGGAAATTGGCTACAATTCTTGTTGTTAGGCCATCTAATTCCCCAACAATTGAAGCATTGAGTGTTGGAATTTCAGACCAAAGTAATGATAAGCAAATAGAGGAGTTGAAGTTAAAGAACAATGAACTTGATTTACAGCTCCATCAGGCTCGGGTTGTTATTTCAAAGCTAGAAAAGGAGAGGACTCGCACTAAAAAAACCAAATCCTTCCAAAAGAATTGCACAATTCTTTGA

Coding sequence (CDS)

ATGGGTATCATCGAGCCATTATCCACTTGTGAAGTCAGATTTATTATGAAAGCACAAAGTATTCCTCCATCTGACATGACATGCAAAGACAAGTTCTTAATCCAAAGCACAATAGTTCCCATTGAGACAACTGTTGAAGATATAACTTCCAATAATGGCTTGTTTGGGAAAAATAGTAGCAAGAATATAGAAGAAAGGAAATTGGCTACAATTCTTGTTGTTAGGCCATCTAATTCCCCAACAATTGAAGCATTGAGTGTTGGAATTTCAGACCAAAGTAATGATAAGCAAATAGAGGAGTTGAAGTTAAAGAACAATGAACTTGATTTACAGCTCCATCAGGCTCGGGTTGTTATTTCAAAGCTAGAAAAGGAGAGGACTCGCACTAAAAAAACCAAATCCTTCCAAAAGAATTGCACAATTCTTTGA

Protein sequence

MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSKNIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQARVVISKLEKERTRTKKTKSFQKNCTIL

Homology

[Close]

BLAST of Cla97C03G066810 vs. NCBI nr
Match: XP_023545322.1 (vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.5 bits (410), Expect = 1.0e-36
Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           MGII+PLS+CEV F M+AQS+ P DM CKDKFLIQST+VPIETT++DITS   +FGK+ S
Sbjct: 55  MGIIKPLSSCEVTFTMQAQSVAPLDMVCKDKFLIQSTVVPIETTIDDITSTT-MFGKSGS 114

Query: 61  KNIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQARVVIS 120
           KNIEE KL TI+V+ P+  P  + +++ + DQSND+Q+EELKLK  +L+++LH+A V IS
Sbjct: 115 KNIEETKLNTIIVI-PNVEPLRKEVAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAIS 174

Query: 121 KLEKERTRTKKTKSFQKNCTIL 143
           KLE+ER    K KSF+ NC+IL
Sbjct: 175 KLEQERPSNLKAKSFKNNCSIL 194

[Close]

BLAST of Cla97C03G066810 vs. NCBI nr
Match: XP_008450732.1 (PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 2.3e-36
Identity = 91/142 (64.08%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTV-EDITSNNGLFGKNSS 61
           GII PLS C+V F M+AQ + P DM CKDKFLIQSTIVPIE  + ED+TS   LF KN +
Sbjct: 56  GIINPLSNCKVTFTMQAQKMAPPDMKCKDKFLIQSTIVPIEANLHEDMTSTYNLFEKNGN 115

Query: 62  K-NIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQARVVI 121
           K NIEERKL+TILV   + S TIEALSVG+S+QS DKQIEELKLK  +LD +LH+A + I
Sbjct: 116 KNNIEERKLSTILVKASAASSTIEALSVGVSNQSKDKQIEELKLKITQLDQKLHEAEISI 175

Query: 122 SKLEKERTRTKKTKSFQKNCTI 142
           SKLE+E+ R +K KS QKNC +
Sbjct: 176 SKLEEEKARIQKMKSQQKNCLV 197

[Close]

BLAST of Cla97C03G066810 vs. NCBI nr
Match: XP_022961475.1 (vesicle-associated protein 2-2-like [Cucurbita moschata])

HSP 1 Score: 157.9 bits (398), Expect = 2.5e-35
Identity = 85/142 (59.86%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           MGII+PLS+C V F M+AQS+ P DM CKDKFLIQST+VP ETTV+DITS   +FGK+ S
Sbjct: 55  MGIIKPLSSCLVTFTMQAQSVAPLDMVCKDKFLIQSTVVPTETTVDDITSTT-MFGKSGS 114

Query: 61  KNIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQARVVIS 120
           KNIEE KL TI+V+ P+  P  + +++ + DQSND+Q+EELKLK  +L+++LH+A V IS
Sbjct: 115 KNIEETKLNTIIVI-PNVEPLRKEVAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAIS 174

Query: 121 KLEKERTRTKKTKSFQKNCTIL 143
           KLE+ER    K KSF+ NC+IL
Sbjct: 175 KLEQERPSNLKAKSFKNNCSIL 194

[Close]

BLAST of Cla97C03G066810 vs. NCBI nr
Match: XP_022968793.1 (vesicle-associated protein 2-2-like [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 9.6e-35
Identity = 84/142 (59.15%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           MGII+PL++CEV F  +AQS+ P DM CKDKFLIQST+VPIET V+DITS   +FGK+ S
Sbjct: 55  MGIIKPLNSCEVIFTRQAQSVAPLDMVCKDKFLIQSTVVPIETNVDDITSTT-MFGKSGS 114

Query: 61  KNIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQARVVIS 120
           KNIEE KL TI +V P+  P  + +++ + DQSND+Q+EELKLK  +L+++LH+A V IS
Sbjct: 115 KNIEETKLNTI-IVSPNVEPLRKEMAIEVLDQSNDEQMEELKLKITKLEVKLHEAMVAIS 174

Query: 121 KLEKERTRTKKTKSFQKNCTIL 143
           KLE+ER    K KSF+ NC+IL
Sbjct: 175 KLEQERPSNPKAKSFKNNCSIL 194

[Close]

BLAST of Cla97C03G066810 vs. NCBI nr
Match: XP_022154612.1 (vesicle-associated protein 2-2-like [Momordica charantia])

HSP 1 Score: 139.4 bits (350), Expect = 9.3e-30
Identity = 81/148 (54.73%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           MGII+PLS CEV F M+ Q + P DM CKDKFLI STIVP ETTVEDITS+N LFG++  
Sbjct: 55  MGIIKPLSACEVTFTMQGQGVAPPDMICKDKFLILSTIVPAETTVEDITSSN-LFGEDER 114

Query: 61  KNIEERKLATILVVRPSNSPTIEAL-----SVGISDQSN--DKQIEELKLKNNELDLQLH 120
           K IE++KL   LV   + SP  EAL     ++G+SD  +  DK +E+LKL   EL+L+LH
Sbjct: 115 KYIEKKKLIPTLVRASNYSPYYEALNNEVMALGVSDHPSNYDKYVEKLKLNITELELKLH 174

Query: 121 QARVVISKLEKERTRTKKTKSFQKNCTI 142
           +A+  I KLE+ERTR ++ KS +KNC +
Sbjct: 175 EAQDAICKLEEERTRIQRKKSLEKNCLV 201

[Close]

BLAST of Cla97C03G066810 vs. TrEMBL
Match: tr|A0A1S3BPU6|A0A1S3BPU6_CUCME (vesicle-associated protein 1-3-like OS=Cucumis melo OX=3656 GN=LOC103492223 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 91/142 (64.08%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTV-EDITSNNGLFGKNSS 61
           GII PLS C+V F M+AQ + P DM CKDKFLIQSTIVPIE  + ED+TS   LF KN +
Sbjct: 56  GIINPLSNCKVTFTMQAQKMAPPDMKCKDKFLIQSTIVPIEANLHEDMTSTYNLFEKNGN 115

Query: 62  K-NIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQARVVI 121
           K NIEERKL+TILV   + S TIEALSVG+S+QS DKQIEELKLK  +LD +LH+A + I
Sbjct: 116 KNNIEERKLSTILVKASAASSTIEALSVGVSNQSKDKQIEELKLKITQLDQKLHEAEISI 175

Query: 122 SKLEKERTRTKKTKSFQKNCTI 142
           SKLE+E+ R +K KS QKNC +
Sbjct: 176 SKLEEEKARIQKMKSQQKNCLV 197

[Close]

BLAST of Cla97C03G066810 vs. TrEMBL
Match: tr|A0A0A0LWK4|A0A0A0LWK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573570 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.6e-23
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 16  MKAQSIPPSDMTCKDKFLIQSTIVPIETTVED--ITSNNGLFGKNSSK-NIEERKLATIL 75
           M+AQ + P DM CKDKFLIQSTIVPIET + +  +TS   LF KN SK NIEER+L+TIL
Sbjct: 1   MQAQQMAPPDMKCKDKFLIQSTIVPIETNLHEDYVTSTYNLFEKNGSKNNIEERRLSTIL 60

Query: 76  VVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQ 115
           V   S+SPTIE L+VG+S+QS DK+IEELKLK  +LD +LH+
Sbjct: 61  VKDESSSPTIETLNVGVSNQSKDKEIEELKLKITQLDQKLHE 102

[Close]

BLAST of Cla97C03G066810 vs. TrEMBL
Match: tr|A0A151U511|A0A151U511_CAJCA (Vesicle-associated membrane protein-associated protein SCS2 OS=Cajanus cajan OX=3821 GN=KK1_007090 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-14
Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +G++ P +TCE    M+AQ +PP DM CKDKFLIQST+VP ETT ED+TS+  LF K+ S
Sbjct: 56  VGVLMPKATCEFIVTMQAQRVPPDDMVCKDKFLIQSTMVPGETTSEDVTSS--LFVKDGS 115

Query: 61  KNIEERKLATILVVRPSNSPTIEALS 87
           K IEE KL  + ++ P NSP +  ++
Sbjct: 116 KYIEENKL-KVTLISPPNSPVLSPIN 138

[Close]

BLAST of Cla97C03G066810 vs. TrEMBL
Match: tr|A0A2C9UDY0|A0A2C9UDY0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G017600 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-13
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +GII P +TCE    M+AQ + P D+ CKDKFLIQST+VP  TT EDITS  G+F K S 
Sbjct: 60  IGIIRPKATCEFTVTMQAQKVAPPDLQCKDKFLIQSTVVPFGTTDEDITS--GMFSKESG 119

Query: 61  KNIEERKLATILVVRPSNSPTI 83
           K I+E+KL  +L + P +SP +
Sbjct: 120 KYIDEKKLRVVL-ISPPHSPVL 138

[Close]

BLAST of Cla97C03G066810 vs. TrEMBL
Match: tr|V4T9W5|V4T9W5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001215mg PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-13
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +GII P STC+    M+AQ++ P DM CKDKFLIQST+VP+ TT EDIT++  +F K+  
Sbjct: 55  VGIILPKSTCDFNVTMQAQAVAPPDMVCKDKFLIQSTVVPVGTTDEDITAS--MFAKDDG 114

Query: 61  KNIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELK 103
           + I+E KL  IL + P NSP +  ++ G+  Q    +   LK
Sbjct: 115 RYIQENKLRVIL-ISPPNSPVLSPIN-GVLKQGPTYESSSLK 152

[Close]

BLAST of Cla97C03G066810 vs. Swiss-Prot
Match: sp|B9DHD7|VAP22_ARATH (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-14
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +G++ P STCE   IM+A   PP DM CKDKFLIQST V  ETT EDIT++  +F K   
Sbjct: 55  VGVVAPKSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS--MFSKAEG 114

Query: 61  KNIEERKLATILVVRPSNSPTIEALS 87
           K+IEE KL  + +V PS+SP +  ++
Sbjct: 115 KHIEENKL-RVTLVPPSDSPELSPIN 137

[Close]

BLAST of Cla97C03G066810 vs. Swiss-Prot
Match: sp|Q8VZ95|VAP11_ARATH (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.0e-09
Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSK 61
           G++ P STCEV   M+AQ   PSDM CKDKFL+Q  I     T +++T    +F K +  
Sbjct: 73  GVVLPRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPE--MFSKEAGH 132

Query: 62  NIEERKLATILVVRP-SNSPTIEALSVG------ISDQSNDKQIE-ELKLKNNELDLQ-- 121
            +EE KL    V  P   SP  E    G      +SD  +  +   E  + +N+   Q  
Sbjct: 133 RVEETKLRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQEN 192

Query: 122 LHQARVVISKLEKER 127
             +AR +I+KL +E+
Sbjct: 193 TSEARALITKLTEEK 205

[Close]

BLAST of Cla97C03G066810 vs. Swiss-Prot
Match: sp|Q9SYC9|VAP14_ARATH (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +G++ P S+CEV  IM+A    P+DM C+DK L Q  +V  ETT +D+TS   +F K + 
Sbjct: 226 VGVVLPRSSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSE--MFSKEAG 285

Query: 61  KNIEERKLATILVVRPS-NSPTIEALSVGISDQSN 95
              EE +L  + V  P   SP  E    G S +++
Sbjct: 286 HPAEETRLKVMYVTPPQPPSPVQEGTEEGSSPRAS 318

[Close]

BLAST of Cla97C03G066810 vs. Swiss-Prot
Match: sp|Q9LVU1|VAP21_ARATH (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSK 61
           G+I+P  +C +R  ++AQ   P DM CKDKFL+QSTIVP  T V+++  +   F K+S K
Sbjct: 60  GVIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDT--FTKDSGK 119

Query: 62  NIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQ 115
            + E KL  +  + PS +           D  + + I  ++    E D  + Q
Sbjct: 120 TLTECKL-KVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQ 169

[Close]

BLAST of Cla97C03G066810 vs. Swiss-Prot
Match: sp|Q9SHC8|VAP12_ARATH (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSK 61
           G++ P S+ EV   M+AQ   P+D+ CKDKFL+Q  +     T +D+T  + +F K +  
Sbjct: 56  GVVHPRSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVT--HEMFSKEAGH 115

Query: 62  NIEERKLATILVVRP-SNSPTIEALSVG------ISDQSNDKQIEEL-KLKNNELDLQ-- 121
            +EE KL  + V  P   SP  E    G      +SD  N        +   + +D Q  
Sbjct: 116 RVEETKLRVVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDN 175

Query: 122 LHQARVVISKLEKER 127
             +AR +++KL +E+
Sbjct: 176 SSEARALVTKLTEEK 188

[Close]

BLAST of Cla97C03G066810 vs. TAIR10
Match: AT1G08820.1 (vamp/synaptobrevin-associated protein 27-2)

HSP 1 Score: 80.5 bits (197), Expect = 9.3e-16
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +G++ P STCE   IM+A   PP DM CKDKFLIQST V  ETT EDIT++  +F K   
Sbjct: 55  VGVVAPKSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITAS--MFSKAEG 114

Query: 61  KNIEERKLATILVVRPSNSPTIEALS 87
           K+IEE KL  + +V PS+SP +  ++
Sbjct: 115 KHIEENKL-RVTLVPPSDSPELSPIN 137

[Close]

BLAST of Cla97C03G066810 vs. TAIR10
Match: AT3G60600.1 (vesicle associated protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.5e-10
Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSK 61
           G++ P STCEV   M+AQ   PSDM CKDKFL+Q  I     T +++T    +F K +  
Sbjct: 73  GVVLPRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPE--MFSKEAGH 132

Query: 62  NIEERKLATILVVRP-SNSPTIEALSVG------ISDQSNDKQIE-ELKLKNNELDLQ-- 121
            +EE KL    V  P   SP  E    G      +SD  +  +   E  + +N+   Q  
Sbjct: 133 RVEETKLRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQEN 192

Query: 122 LHQARVVISKLEKER 127
             +AR +I+KL +E+
Sbjct: 193 TSEARALITKLTEEK 205

[Close]

BLAST of Cla97C03G066810 vs. TAIR10
Match: AT1G51270.3 (structural molecules;transmembrane receptors;structural molecules)

HSP 1 Score: 61.2 bits (147), Expect = 5.8e-10
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 1   MGIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSS 60
           +G++ P S+CEV  IM+A    P+DM C+DK L Q  +V  ETT +D+TS   +F K + 
Sbjct: 226 VGVVLPRSSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSE--MFSKEAG 285

Query: 61  KNIEERKLATILVVRPS-NSPTIEALSVGISDQSN 95
              EE +L  + V  P   SP  E    G S +++
Sbjct: 286 HPAEETRLKVMYVTPPQPPSPVQEGTEEGSSPRAS 318

[Close]

BLAST of Cla97C03G066810 vs. TAIR10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein)

HSP 1 Score: 60.5 bits (145), Expect = 9.9e-10
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSK 61
           G+I+P  +C +R  ++AQ   P DM CKDKFL+QSTIVP  T V+++  +   F K+S K
Sbjct: 60  GVIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDT--FTKDSGK 119

Query: 62  NIEERKLATILVVRPSNSPTIEALSVGISDQSNDKQIEELKLKNNELDLQLHQ 115
            + E KL  +  + PS +           D  + + I  ++    E D  + Q
Sbjct: 120 TLTECKL-KVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQ 169

[Close]

BLAST of Cla97C03G066810 vs. TAIR10
Match: AT2G45140.1 (plant VAP homolog 12)

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-09
Identity = 42/135 (31.11%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 2   GIIEPLSTCEVRFIMKAQSIPPSDMTCKDKFLIQSTIVPIETTVEDITSNNGLFGKNSSK 61
           G++ P S+ EV   M+AQ   P+D+ CKDKFL+Q  +     T +D+T  + +F K +  
Sbjct: 56  GVVHPRSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVT--HEMFSKEAGH 115

Query: 62  NIEERKLATILVVRP-SNSPTIEALSVG------ISDQSNDKQIEEL-KLKNNELDLQ-- 121
            +EE KL  + V  P   SP  E    G      +SD  N        +   + +D Q  
Sbjct: 116 RVEETKLRVVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDN 175

Query: 122 LHQARVVISKLEKER 127
             +AR +++KL +E+
Sbjct: 176 SSEARALVTKLTEEK 188

The following BLAST results are available for this feature:

BLAST of Cla97C03G066810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545322.1	1.0e-36	60.56	vesicle-associated protein 2-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_008450732.1	2.3e-36	64.08	PREDICTED: vesicle-associated protein 1-3-like [Cucumis melo]	[more]
XP_022961475.1	2.5e-35	59.86	vesicle-associated protein 2-2-like [Cucurbita moschata]	[more]
XP_022968793.1	9.6e-35	59.15	vesicle-associated protein 2-2-like [Cucurbita maxima]	[more]
XP_022154612.1	9.3e-30	54.73	vesicle-associated protein 2-2-like [Momordica charantia]	[more]

BLAST of Cla97C03G066810 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPU6\|A0A1S3BPU6_CUCME	1.5e-36	64.08	vesicle-associated protein 1-3-like OS=Cucumis melo OX=3656 GN=LOC103492223 PE=4...	[more]
tr\|A0A0A0LWK4\|A0A0A0LWK4_CUCSA	5.6e-23	63.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573570 PE=4 SV=1	[more]
tr\|A0A151U511\|A0A151U511_CAJCA	4.7e-14	52.33	Vesicle-associated membrane protein-associated protein SCS2 OS=Cajanus cajan OX=...	[more]
tr\|A0A2C9UDY0\|A0A2C9UDY0_MANES	1.4e-13	53.66	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G017600 PE=4 SV=...	[more]
tr\|V4T9W5\|V4T9W5_9ROSI	4.0e-13	46.08	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001215mg PE=4 ...	[more]

BLAST of Cla97C03G066810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9DHD7\|VAP22_ARATH	1.7e-14	51.16	Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=...	[more]
sp\|Q8VZ95\|VAP11_ARATH	8.0e-09	34.81	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
sp\|Q9SYC9\|VAP14_ARATH	1.0e-08	37.89	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]
sp\|Q9LVU1\|VAP21_ARATH	1.8e-08	33.63	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]
sp\|Q9SHC8\|VAP12_ARATH	1.5e-07	31.11	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]

BLAST of Cla97C03G066810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08820.1	9.3e-16	51.16	vamp/synaptobrevin-associated protein 27-2	[more]
AT3G60600.1	4.5e-10	34.81	vesicle associated protein	[more]
AT1G51270.3	5.8e-10	37.89	structural molecules;transmembrane receptors;structural molecules	[more]
AT5G47180.1	9.9e-10	33.63	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT2G45140.1	8.4e-09	31.11	plant VAP homolog 12	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005789	endoplasmic reticulum membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR008962	PapD-like_sf
IPR000535	MSP_dom
IPR016763	VAP
IPR013783	Ig-like_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0044464	cell part
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G066810.1	Cla97C03G066810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 98..125
None	No IPR available	PANTHER	PTHR10809:SF45	VESICLE-ASSOCIATED PROTEIN 2-2	coord: 1..84
IPR013783	Immunoglobulin-like fold	GENE3D	G3DSA:2.60.40.10		coord: 1..76 e-value: 3.7E-10 score: 41.7
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 1..84
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 1..73 score: 10.997
IPR008962	PapD-like superfamily	SUPERFAMILY	SSF49354	PapD-like	coord: 1..81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G066810	Cla011302	Watermelon (97103) v1	wmwmbB125
Cla97C03G066810	Csa1G573570	Cucumber (Chinese Long) v2	cuwmbB042
Cla97C03G066810	MELO3C015371	Melon (DHL92) v3.5.1	mewmbB249
Cla97C03G066810	ClCG03G016500	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G066810	CSPI01G27160	Wild cucumber (PI 183967)	cpiwmbB043
Cla97C03G066810	Cucsa.289190	Cucumber (Gy14) v1	cgywmbB506
Cla97C03G066810	CmaCh10G010970	Cucurbita maxima (Rimu)	cmawmbB062
Cla97C03G066810	CmoCh10G011740	Cucurbita moschata (Rifu)	cmowmbB049
Cla97C03G066810	Lsi06G001800	Bottle gourd (USVL1VR-Ls)	lsiwmbB365
Cla97C03G066810	CsGy1G026360	Cucumber (Gy14) v2	cgybwmbB041
Cla97C03G066810	MELO3C015371.2	Melon (DHL92) v3.6.1	medwmbB235
Cla97C03G066810	Carg27087	Silver-seed gourd	carwmbB0799
Cla97C03G066810	CsaV3_1G039480	Cucumber (Chinese Long) v3	cucwmbB041
Cla97C03G066810	Bhi02G001764	Wax gourd	wgowmbB633

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None