Cla97C02G044870 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G044870
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	NAD(P)H-quinone oxidoreductase subunit N
Location	Cla97Chr02 : 33012336 .. 33013115 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCTGTAGCCTCCATGTTGAACGGAGCAGCCCTAGCGCCACCGCTCCATCTTCAGCCAAGGCCGCACCATCCACTCACCTCCCCGGCGATGGTGCCGATGAGCATGCGGAGGTCGAGTTTCGGCGCCGGCAATGGCAGAGCCGCGACGGTGAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGCGGAGATTTGCTTAAGTTCGACCTAGGGCAATGGCTATCGGACGTGGAGGAACACAAAGCCCTAGCTATTTACTCGCCGCATGAAGGCGGATACGAAGGCCGATACCTAAATCGCCTCCGCTACCAGGGCTACCACTTCCTCGATCTATCCGCTCGCGGCCTTGGCGATCCTGAGACCACTCTCACCAAAATTCACCCAGTTTGCCCTGTCCGTTGAATCGAATCATTACGGCTAATTCACCTTCATCATTGTTTTCTAGGGTTTCGTCGATTGTTCTTACTTTGGCTTCGAATTGCAGGCTCATTTGGGGAAGCAGCCGATCGCTCGGTGGTATTTCCCGCCGGAAGTCGATTACAGGCTCGCGGCTCTGCCTCCGAACTCTAAGGGACTCGTTGTGTGGATAATCGAGGCCAAGGTGAGATTCTTTGAAGTGCCATTAACGATTCAGAATCAGCCAATTTGAGAAGAATGGATTACCGAATTGGAAACACTGTTCAGGTTTTGTCCAAGGCGGAGTTGCAGTTCCTTGCTTTGCTGCCGACTCTCCGGCCGAAAGTCCGAGTCATCGCCGAGTGCGGGAATTGGTAG

mRNA sequence

ATGGCCCCTGTAGCCTCCATGTTGAACGGAGCAGCCCTAGCGCCACCGCTCCATCTTCAGCCAAGGCCGCACCATCCACTCACCTCCCCGGCGATGGTGCCGATGAGCATGCGGAGGTCGAGTTTCGGCGCCGGCAATGGCAGAGCCGCGACGGTGAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGCGGAGATTTGCTTAAGTTCGACCTAGGGCAATGGCTATCGGACGTGGAGGAACACAAAGCCCTAGCTATTTACTCGCCGCATGAAGGCGGATACGAAGGCCGATACCTAAATCGCCTCCGCTACCAGGGCTACCACTTCCTCGATCTATCCGCTCGCGGCCTTGGCGATCCTGAGACCACTCTCACCAAAATTCACCCAGTTTGCCCTGCTCATTTGGGGAAGCAGCCGATCGCTCGGTGGTATTTCCCGCCGGAAGTCGATTACAGGCTCGCGGCTCTGCCTCCGAACTCTAAGGGACTCGTTGTGTGGATAATCGAGGCCAAGGTTTTGTCCAAGGCGGAGTTGCAGTTCCTTGCTTTGCTGCCGACTCTCCGGCCGAAAGTCCGAGTCATCGCCGAGTGCGGGAATTGGTAG

Coding sequence (CDS)

ATGGCCCCTGTAGCCTCCATGTTGAACGGAGCAGCCCTAGCGCCACCGCTCCATCTTCAGCCAAGGCCGCACCATCCACTCACCTCCCCGGCGATGGTGCCGATGAGCATGCGGAGGTCGAGTTTCGGCGCCGGCAATGGCAGAGCCGCGACGGTGAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGCGGAGATTTGCTTAAGTTCGACCTAGGGCAATGGCTATCGGACGTGGAGGAACACAAAGCCCTAGCTATTTACTCGCCGCATGAAGGCGGATACGAAGGCCGATACCTAAATCGCCTCCGCTACCAGGGCTACCACTTCCTCGATCTATCCGCTCGCGGCCTTGGCGATCCTGAGACCACTCTCACCAAAATTCACCCAGTTTGCCCTGCTCATTTGGGGAAGCAGCCGATCGCTCGGTGGTATTTCCCGCCGGAAGTCGATTACAGGCTCGCGGCTCTGCCTCCGAACTCTAAGGGACTCGTTGTGTGGATAATCGAGGCCAAGGTTTTGTCCAAGGCGGAGTTGCAGTTCCTTGCTTTGCTGCCGACTCTCCGGCCGAAAGTCCGAGTCATCGCCGAGTGCGGGAATTGGTAG

Protein sequence

MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNW

Homology

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BLAST of Cla97C02G044870 vs. NCBI nr
Match: XP_008456262.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 2.5e-105
Identity = 188/201 (93.53%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           MAPVASM NGA LAPPLHL    HHPLTSPAMVP++ RRSSF  GNGRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

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BLAST of Cla97C02G044870 vs. NCBI nr
Match: XP_004139925.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46772.1 hypothetical protein Csa_6G133810 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 1.8e-103
Identity = 184/201 (91.54%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           MAP+ASM NGA LAPPLH     HHPLTSPAM+P++ RRSS   GNGRAATVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

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BLAST of Cla97C02G044870 vs. NCBI nr
Match: XP_023007243.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima])

HSP 1 Score: 374.4 bits (960), Expect = 2.4e-100
Identity = 181/201 (90.05%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           M P+ASMLNGAALAP LHL PR   PLTSPA + +  RR+ FG G GRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

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BLAST of Cla97C02G044870 vs. NCBI nr
Match: XP_023533875.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 1.3e-98
Identity = 179/201 (89.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           M P+ASMLNGAALAP LHL PR   P TS A + +  RR+ FG G GRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

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BLAST of Cla97C02G044870 vs. NCBI nr
Match: XP_022947360.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita moschata])

HSP 1 Score: 368.2 bits (944), Expect = 1.7e-98
Identity = 179/201 (89.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           M P+ASMLNGAALAP LHL PR   P TS A + +  RR+ FG G GRAATVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

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BLAST of Cla97C02G044870 vs. TrEMBL
Match: tr|A0A1S3C430|A0A1S3C430_CUCME (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496258 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.7e-105
Identity = 188/201 (93.53%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           MAPVASM NGA LAPPLHL    HHPLTSPAMVP++ RRSSF  GNGRAATVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

[Close]

BLAST of Cla97C02G044870 vs. TrEMBL
Match: tr|A0A0A0KEC3|A0A0A0KEC3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.2e-103
Identity = 184/201 (91.54%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAPVASMLNGAALAPPLHLQPRPHHPLTSPAMVPMSMRRSSFGAGNGRAATVRCEGIGIG 60
           MAP+ASM NGA LAPPLH     HHPLTSPAM+P++ RRSS   GNGRAATVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGY+FLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPN+KGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

[Close]

BLAST of Cla97C02G044870 vs. TrEMBL
Match: tr|A0A2P4HMM4|A0A2P4HMM4_QUESU (Nad(P)h-quinone oxidoreductase subunit n, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_06586 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.4e-80
Identity = 142/163 (87.12%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 39  RSSFGAGNGRAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGR 98
           R  +   N RA  VRC GIGIGDFIGGDL+K DLG+WLSDVEEHKALAIY+PHEGGYEGR
Sbjct: 48  RGRYNKANKRAGMVRCSGIGIGDFIGGDLVKPDLGRWLSDVEEHKALAIYTPHEGGYEGR 107

Query: 99  YLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALP 158
           YLNRLRYQGY+FLDL+ARGLGDPETTLTK+HPVCPAH+GKQPIARWYFPPEVDYRLAALP
Sbjct: 108 YLNRLRYQGYYFLDLTARGLGDPETTLTKVHPVCPAHVGKQPIARWYFPPEVDYRLAALP 167

Query: 159 PNSKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNW 202
           P++KGLVVWIIEAKVLSK+ELQFLALLPTLRPKVRVIAECGNW
Sbjct: 168 PDAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRVIAECGNW 210

[Close]

BLAST of Cla97C02G044870 vs. TrEMBL
Match: tr|A0A2N9HT48|A0A2N9HT48_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43037 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.4e-80
Identity = 146/188 (77.66%), Postives = 164/188 (87.23%), Query Frame = 0


Query: 17  LHLQPRPHHP-LTSPAMVPMSMRRSSFGA--GNGRAATVRCEGIGIGDFIGGDLLKFDLG 76
           L+LQ + H P   +  ++ ++M R   G    N R   VRC G GIGDFIGGDL+KFDLG
Sbjct: 15  LNLQQKQHSPRARNNCLIDITMMRKRGGTNKANKRVGRVRCSGRGIGDFIGGDLVKFDLG 74

Query: 77  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCP 136
           +WLSDVEEHKALAIY+PHEGGYEGRYLNRL YQGY+FLDL+ARGLGDPE+TLTKIHPVCP
Sbjct: 75  RWLSDVEEHKALAIYTPHEGGYEGRYLNRLTYQGYYFLDLTARGLGDPESTLTKIHPVCP 134

Query: 137 AHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQFLALLPTLRPKVR 196
           AHLGKQPI+RWYFPPEVDYRLAALPP++KGLVVW+IEAKVLSK+ELQFLALLPTLRPKVR
Sbjct: 135 AHLGKQPISRWYFPPEVDYRLAALPPDAKGLVVWVIEAKVLSKSELQFLALLPTLRPKVR 194

Query: 197 VIAECGNW 202
           VIAECGNW
Sbjct: 195 VIAECGNW 202

[Close]

BLAST of Cla97C02G044870 vs. TrEMBL
Match: tr|A0A2C9U2Y8|A0A2C9U2Y8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G123900 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.4e-80
Identity = 150/202 (74.26%), Postives = 165/202 (81.68%), Query Frame = 0


Query: 5   ASMLNGAALAPPLHLQPRPHH---PLTSPAMVPMSMRRSSFGAGNGR--AATVRCEGIGI 64
           A+ L      P ++LQ + HH         M+ +    SS    NGR     VRC GIGI
Sbjct: 4   ATCLQHVGTPPSVNLQQKQHHHQPTKQKTVMMGLGTGWSSLKCKNGRRVGGVVRCSGIGI 63

Query: 65  GDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLG 124
            DFIGGDL+KFDLG+WLSDVEEHKALAIY+PHEGGYEGRY  RLRYQGY+FLDL+ARGLG
Sbjct: 64  EDFIGGDLVKFDLGRWLSDVEEHKALAIYTPHEGGYEGRYFTRLRYQGYYFLDLTARGLG 123

Query: 125 DPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAEL 184
           DPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPP++KGL+VWIIEAKVLSKAEL
Sbjct: 124 DPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPDAKGLIVWIIEAKVLSKAEL 183

Query: 185 QFLALLPTLRPKVRVIAECGNW 202
           QFLALLP+LRPKVRVIAECGNW
Sbjct: 184 QFLALLPSLRPKVRVIAECGNW 205

[Close]

BLAST of Cla97C02G044870 vs. Swiss-Prot
Match: sp|Q9LVM2|NDHN_ARATH (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhN PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 9.5e-72
Identity = 123/154 (79.87%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 48  RAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQG 107
           R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL+ QG
Sbjct: 40  RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRLKMQG 99

Query: 108 YHFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVW 167
           Y+FLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAALPP++KGLVVW
Sbjct: 100 YYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKGLVVW 159

Query: 168 IIEAKVLSKAELQFLALLPTLRPKVRVIAECGNW 202
           ++EAKVLSK+ELQFLALLP+LRP VRVIAECGNW
Sbjct: 160 VLEAKVLSKSELQFLALLPSLRPNVRVIAECGNW 191

[Close]

BLAST of Cla97C02G044870 vs. Swiss-Prot
Match: sp|B7JYJ3|NDHN_CYAP8 (NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 8801) OX=41431 GN=ndhN PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 0


Query: 79  VEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCPAHLGK 138
           +E+  +LA+Y+P EGG+EGRY  RLR  GYH   L+ARGLGD    L  +H V P HLGK
Sbjct: 14  LEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPPHLGK 73

Query: 139 QPIAR-------WYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQFLALLPTLRPK 198
           + I +       ++ PP   Y+L  LPP SKGLV+WI+E  +LS+ EL++LA LPTL P+
Sbjct: 74  KNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPTLEPR 133

Query: 199 VRVIAECG 200
           ++V+ E G
Sbjct: 134 LKVVIELG 141

[Close]

BLAST of Cla97C02G044870 vs. Swiss-Prot
Match: sp|B8HUU1|NDHN_CYAP4 (NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=ndhN PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.4e-29
Identity = 62/133 (46.62%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCP 133
           Q++ D+E+  AL IY P EGG+EGRY  RLR  GY  L +SA GLGD  + LT++H V P
Sbjct: 9   QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68

Query: 134 AHLGKQP-------IARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGK         +  ++ PP V+Y L  LPP ++GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69  PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128

Query: 194 TLRPKVRVIAECG 200
              PKV+++ E G
Sbjct: 129 AQEPKVKIVIELG 141

[Close]

BLAST of Cla97C02G044870 vs. Swiss-Prot
Match: sp|B2ITQ6|NDHN_NOSP7 (NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=ndhN PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.4e-29
Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 76  LSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCPAH 135
           + D+E+  AL +Y P EGGYEGRY  RLR  GY  L ++A+GLGD    LT+IH V P H
Sbjct: 11  IRDLEKFGALGVYVPLEGGYEGRYQRRLRAAGYTTLHITAKGLGDVAAYLTRIHGVRPPH 70

Query: 136 LGKQPIAR-------WYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQFLALLPTL 195
           LGK+           +Y PP +D  L  LPP SKGLV+WIIE  +LS  EL++L  LP L
Sbjct: 71  LGKKSTGSGAAVGQVYYLPPILDSHLEQLPPKSKGLVLWIIEGHILSNEELEYLTNLPQL 130

Query: 196 RPKVRVIAECG 200
            P+V+V+ E G
Sbjct: 131 EPRVKVVIERG 141

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BLAST of Cla97C02G044870 vs. Swiss-Prot
Match: sp|Q8DJU2|NDHN_THEEB (NAD(P)H-quinone oxidoreductase subunit N OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhN PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.9e-29
Identity = 63/126 (50.00%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYHFLDLSARGLGDPETTLTKIHPVCP 133
           Q++ D+E   ALA++ P EGG+EGRY  RLR +GY  L +SA GLGD    LT+ H + P
Sbjct: 8   QFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRP 67

Query: 134 AHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVWIIEAKVLSKAELQFLALLPTLRPKVR 193
           AH GK+ I  ++ PP V Y L  LPPN+KGLV+W+I+ K LSK E  +LA L    PK +
Sbjct: 68  AHTGKEDIRVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFK 127

Query: 194 VIAECG 200
           V+ E G
Sbjct: 128 VVVEVG 133

[Close]

BLAST of Cla97C02G044870 vs. TAIR10
Match: AT5G58260.1 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor)

HSP 1 Score: 271.2 bits (692), Expect = 5.2e-73
Identity = 123/154 (79.87%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 48  RAATVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQG 107
           R+  V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYEGRYLNRL+ QG
Sbjct: 40  RSTGVKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYEGRYLNRLKMQG 99

Query: 108 YHFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNSKGLVVW 167
           Y+FLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAALPP++KGLVVW
Sbjct: 100 YYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAALPPSAKGLVVW 159

Query: 168 IIEAKVLSKAELQFLALLPTLRPKVRVIAECGNW 202
           ++EAKVLSK+ELQFLALLP+LRP VRVIAECGNW
Sbjct: 160 VLEAKVLSKSELQFLALLPSLRPNVRVIAECGNW 191

The following BLAST results are available for this feature:

BLAST of Cla97C02G044870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456262.1	2.5e-105	93.53	PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo...	[more]
XP_004139925.1	1.8e-103	91.54	PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sati...	[more]
XP_023007243.1	2.4e-100	90.05	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima]	[more]
XP_023533875.1	1.3e-98	89.05	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita pepo subsp. p...	[more]
XP_022947360.1	1.7e-98	89.05	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cla97C02G044870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C430\|A0A1S3C430_CUCME	1.7e-105	93.53	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0KEC3\|A0A0A0KEC3_CUCSA	1.2e-103	91.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1	[more]
tr\|A0A2P4HMM4\|A0A2P4HMM4_QUESU	1.4e-80	87.12	Nad(P)h-quinone oxidoreductase subunit n, chloroplastic OS=Quercus suber OX=5833...	[more]
tr\|A0A2N9HT48\|A0A2N9HT48_FAGSY	5.4e-80	77.66	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43037 PE=4 SV=1	[more]
tr\|A0A2C9U2Y8\|A0A2C9U2Y8_MANES	5.4e-80	74.26	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G123900 PE=4 SV=...	[more]

BLAST of Cla97C02G044870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LVM2\|NDHN_ARATH	9.5e-72	79.87	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana ...	[more]
sp\|B7JYJ3\|NDHN_CYAP8	1.2e-29	49.22	NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 8801) OX=...	[more]
sp\|B8HUU1\|NDHN_CYAP4	4.4e-29	46.62	NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / AT...	[more]
sp\|B2ITQ6\|NDHN_NOSP7	4.4e-29	49.62	NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc punctiforme (strain ATCC 2913...	[more]
sp\|Q8DJU2\|NDHN_THEEB	9.9e-29	50.00	NAD(P)H-quinone oxidoreductase subunit N OS=Thermosynechococcus elongatus (strai...	[more]

BLAST of Cla97C02G044870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58260.1	5.2e-73	79.87	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR020874	NAD(P)H-quinone_OxRdtase_su_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009817	defense response to fungus, incompatible interaction
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G044870.1	Cla97C02G044870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PFAM	PF11909	NdhN	coord: 74..200 e-value: 6.9E-51 score: 171.8
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PANTHER	PTHR35515	FAMILY NOT NAMED	coord: 44..201
None	No IPR available	PANTHER	PTHR35515:SF1	NAD P H-QUINONE OXIDOREDUCTASE SUBUNIT N, CHLOROPLASTIC	coord: 44..201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G044870	Cla013428	Watermelon (97103) v1	wmwmbB316
Cla97C02G044870	Csa6G133810	Cucumber (Chinese Long) v2	cuwmbB442
Cla97C02G044870	MELO3C019595	Melon (DHL92) v3.5.1	mewmbB109
Cla97C02G044870	ClCG02G018940	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G044870	CSPI06G10800	Wild cucumber (PI 183967)	cpiwmbB465
Cla97C02G044870	Cucsa.118810	Cucumber (Gy14) v1	cgywmbB174
Cla97C02G044870	CmaCh02G006850	Cucurbita maxima (Rimu)	cmawmbB637
Cla97C02G044870	CmoCh02G006850	Cucurbita moschata (Rifu)	cmowmbB588
Cla97C02G044870	Lsi10G014920	Bottle gourd (USVL1VR-Ls)	lsiwmbB052
Cla97C02G044870	CsGy6G010890	Cucumber (Gy14) v2	cgybwmbB419
Cla97C02G044870	MELO3C019595.2	Melon (DHL92) v3.6.1	medwmbB086
Cla97C02G044870	Carg11747	Silver-seed gourd	carwmbB1119
Cla97C02G044870	CsaV3_6G013250	Cucumber (Chinese Long) v3	cucwmbB459
Cla97C02G044870	Bhi10G000705	Wax gourd	wgowmbB368

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G044870	Silver-seed gourd	carwmbB0346
Cla97C02G044870	Silver-seed gourd	carwmbB1114
Cla97C02G044870	Cucumber (Gy14) v2	cgybwmbB495
Cla97C02G044870	Cucurbita maxima (Rimu)	cmawmbB568
Cla97C02G044870	Cucurbita maxima (Rimu)	cmawmbB614
Cla97C02G044870	Cucurbita moschata (Rifu)	cmowmbB545
Cla97C02G044870	Wild cucumber (PI 183967)	cpiwmbB548
Cla97C02G044870	Cucumber (Chinese Long) v3	cucwmbB544
Cla97C02G044870	Cucumber (Chinese Long) v2	cuwmbB524
Cla97C02G044870	Melon (DHL92) v3.5.1	mewmbB186