Cla97C02G043590 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G043590
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Retrotransposon gag protein
Location	Cla97Chr02 : 31729802 .. 31730932 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGAAAACTCAGGCGTTCACCGTCGCCATTGCCATTCCGGCGACGTAATGCCGATTATACCACCGCCACCGATTACGATGCTTCTCCATCTCAATCTCTCTATGCATCGAACGAAGACGACTATGACCCCTCTGAATCTGTTAACTCCCACCCCACTGACCCCAAATCAAAATCCCTAGAAATTAAGCCCTCTGATTTAAGAACCGCCGCAGAATCCGCCTCCAAAAACAGCTTAGCGTATTTACAGACTCCAAACGCCGCCCAAACTGTATTTCCATACATCAACGTTGCACCGTTGCCGATTTTTCACGGCAGCGCCGATGAGTGTCCGGTGATACATTTAAGCAGATTCGCCAAAGTCTGCCGTGCGAACAACGCAACCTCCATCGACATGATGATGAGAATCTTCCCGGTGACGTTAGAGGGTGAGGCAGCGCTTTGGTACGACTTGAACATCGAGCCCTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTGTTTCTTGGATGCTTTCAATAAAATTGAATTGACTGACCAGTTGCGATCGGAGCTTATGACGATAAAACAACGGGAAGAGGAGAGTGTACGTTTGTATTTTCTGAGGTTGCAGTTGATTTTGAAGAAATGGCCACCGGGTAATTCACTTTCCGATGGCTTGTTGAAGACGATTTTTGTTGACGGATTGAGGGAAGAGTTCAAGGAATGGATGATTCTACAGAAACCGAGTTCATTGAACGAGGCATTGAGACTTGCATTTGGGTTTGAACAAGTAAGGACCGTCAGTACATCTGGCAAAAGGGGGTTTCTTCGGTGTGGGTTTTGTGAGGGGCCGCACGAGGAATTGGTTTGTGAGGTTAGGGAGAGAATGAGACAGTTGTGGAAGAGTAGGGAAAAGAAGAATACGGTTGACGTGGTGCAGAGTGACGGCCGTGAAGCGGCAATGGCAACGGCGGAGCTTATGCGATCGTCTTCGGCAATTAGTAGAAACGAATCGGAGGTTGAAAATGATGGCGGGGAGATGGTGGGTTTGAAGAAGAAGAGTCAGTGTCAATGTTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGGTATCAAAAAATTCTAAAGGCTGA

mRNA sequence

ATGGCGCGAAAACTCAGGCGTTCACCGTCGCCATTGCCATTCCGGCGACGTAATGCCGATTATACCACCGCCACCGATTACGATGCTTCTCCATCTCAATCTCTCTATGCATCGAACGAAGACGACTATGACCCCTCTGAATCTGTTAACTCCCACCCCACTGACCCCAAATCAAAATCCCTAGAAATTAAGCCCTCTGATTTAAGAACCGCCGCAGAATCCGCCTCCAAAAACAGCTTAGCGTATTTACAGACTCCAAACGCCGCCCAAACTGTATTTCCATACATCAACGTTGCACCGTTGCCGATTTTTCACGGCAGCGCCGATGAGTGTCCGGTGATACATTTAAGCAGATTCGCCAAAGTCTGCCGTGCGAACAACGCAACCTCCATCGACATGATGATGAGAATCTTCCCGGTGACGTTAGAGGGTGAGGCAGCGCTTTGGTACGACTTGAACATCGAGCCCTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTGTTTCTTGGATGCTTTCAATAAAATTGAATTGACTGACCAGTTGCGATCGGAGCTTATGACGATAAAACAACGGGAAGAGGAGAGTGTACGTTTGTATTTTCTGAGGTTGCAGTTGATTTTGAAGAAATGGCCACCGGGTAATTCACTTTCCGATGGCTTGTTGAAGACGATTTTTGTTGACGGATTGAGGGAAGAGTTCAAGGAATGGATGATTCTACAGAAACCGAGTTCATTGAACGAGGCATTGAGACTTGCATTTGGGTTTGAACAAGTAAGGACCGTCAGTACATCTGGCAAAAGGGGGTTTCTTCGGTGTGGGTTTTGTGAGGGGCCGCACGAGGAATTGGTTTGTGAGGTTAGGGAGAGAATGAGACAGTTGTGGAAGAGTAGGGAAAAGAAGAATACGGTTGACGTGGTGCAGAGTGACGGCCGTGAAGCGGCAATGGCAACGGCGGAGCTTATGCGATCGTCTTCGGCAATTAGTAGAAACGAATCGGAGGTTGAAAATGATGGCGGGGAGATGGTGGGTTTGAAGAAGAAGAGTCAGTGTCAATGTTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGGTATCAAAAAATTCTAAAGGCTGA

Coding sequence (CDS)

ATGGCGCGAAAACTCAGGCGTTCACCGTCGCCATTGCCATTCCGGCGACGTAATGCCGATTATACCACCGCCACCGATTACGATGCTTCTCCATCTCAATCTCTCTATGCATCGAACGAAGACGACTATGACCCCTCTGAATCTGTTAACTCCCACCCCACTGACCCCAAATCAAAATCCCTAGAAATTAAGCCCTCTGATTTAAGAACCGCCGCAGAATCCGCCTCCAAAAACAGCTTAGCGTATTTACAGACTCCAAACGCCGCCCAAACTGTATTTCCATACATCAACGTTGCACCGTTGCCGATTTTTCACGGCAGCGCCGATGAGTGTCCGGTGATACATTTAAGCAGATTCGCCAAAGTCTGCCGTGCGAACAACGCAACCTCCATCGACATGATGATGAGAATCTTCCCGGTGACGTTAGAGGGTGAGGCAGCGCTTTGGTACGACTTGAACATCGAGCCCTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTGTTTCTTGGATGCTTTCAATAAAATTGAATTGACTGACCAGTTGCGATCGGAGCTTATGACGATAAAACAACGGGAAGAGGAGAGTGTACGTTTGTATTTTCTGAGGTTGCAGTTGATTTTGAAGAAATGGCCACCGGGTAATTCACTTTCCGATGGCTTGTTGAAGACGATTTTTGTTGACGGATTGAGGGAAGAGTTCAAGGAATGGATGATTCTACAGAAACCGAGTTCATTGAACGAGGCATTGAGACTTGCATTTGGGTTTGAACAAGTAAGGACCGTCAGTACATCTGGCAAAAGGGGGTTTCTTCGGTGTGGGTTTTGTGAGGGGCCGCACGAGGAATTGGTTTGTGAGGTTAGGGAGAGAATGAGACAGTTGTGGAAGAGTAGGGAAAAGAAGAATACGGTTGACGTGGTGCAGAGTGACGGCCGTGAAGCGGCAATGGCAACGGCGGAGCTTATGCGATCGTCTTCGGCAATTAGTAGAAACGAATCGGAGGTTGAAAATGATGGCGGGGAGATGGTGGGTTTGAAGAAGAAGAGTCAGTGTCAATGTTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGGTATCAAAAAATTCTAAAGGCTGA

Protein sequence

MARKLRRSPSPLPFRRRNADYTTATDYDASPSQSLYASNEDDYDPSESVNSHPTDPKSKSLEIKPSDLRTAAESASKNSLAYLQTPNAAQTVFPYINVAPLPIFHGSADECPVIHLSRFAKVCRANNATSIDMMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQREEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRLAFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLWKSREKKNTVDVVQSDGREAAMATAELMRSSSAISRNESEVENDGGEMVGLKKKSQCQCWKHQCGMKKLDRNLSMVSKNSKG

Homology

[Close]

BLAST of Cla97C02G043590 vs. NCBI nr
Match: POE94094.1 (hypothetical protein CFP56_47498 [Quercus suber])

HSP 1 Score: 329.7 bits (844), Expect = 1.3e-86
Identity = 185/338 (54.73%), Postives = 234/338 (69.23%), Query Frame = 0


Query: 39  NEDDYDPSESVNSHPTDPKSKSLEIKPS---DLRTAAESASKNSLAYLQTPNAAQTVFPY 98
           N+D Y  SES  S P D  S  L    S   +L T     S ++   +  P +   +  Y
Sbjct: 152 NDDAYIGSESETSAPGDRFSSQLRDPDSQSINLSTTVFPNSTSNFPKISQPPSTH-LASY 211

Query: 99  INVAPLPIFHGSADECPVIHLSRFAKVCRANNATSIDMMMRIFPVTLEGEAALWYDLNIE 158
           +N+AP PIFHG+ +ECPV H+SRFAKVC ANN ++ DMMMRIFPVTLE EAALWYDLNIE
Sbjct: 212 MNIAPFPIFHGNPNECPVKHVSRFAKVCVANNVSTTDMMMRIFPVTLEDEAALWYDLNIE 271

Query: 159 PYPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQREEESVRLYFLRLQLILKKWPPGN 218
           PYP ++WEE+KS FL A++KIE+ DQLRSELM I Q +EESVR YFLRLQ ILK+W P +
Sbjct: 272 PYPSLTWEEIKSSFLHAYHKIEVVDQLRSELMMINQGDEESVRSYFLRLQWILKQW-PDH 331

Query: 219 SLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRLAFGFEQVRTVSTSGKRGFLRCGF 278
            +SDGLLK +F+DGLREEF++W+I QKP SL+EALRLAFGFEQV+++    K   L+CGF
Sbjct: 332 GISDGLLKGVFIDGLREEFRDWIIPQKPDSLHEALRLAFGFEQVKSIRAVRKE--LKCGF 391

Query: 279 CEGPHEELVCEVRERMRQLWKSREKKNTVDVVQSDGREAAMATAELMRSSSAISRNESEV 338
           C+G HEE  CEVRERMR+LW+  ++K    V+    R       EL+RS S I  + S  
Sbjct: 392 CDGMHEERDCEVRERMRKLWRESKEKEEAVVLAKSTRSDDELGKELVRSVS-IGASSSVG 451

Query: 339 ENDGGEMVGLK--KKSQCQCWKHQCGMKKLDRNLSMVS 372
           +N+ GE  G    KK+Q Q WK+Q  MKKL+RN S++S
Sbjct: 452 KNNEGEEGGFMDGKKNQFQYWKYQRWMKKLERNNSLIS 484

[Close]

BLAST of Cla97C02G043590 vs. NCBI nr
Match: EXB78111.1 (hypothetical protein L484_004813 [Morus notabilis])

HSP 1 Score: 324.7 bits (831), Expect = 4.1e-85
Identity = 176/318 (55.35%), Postives = 222/318 (69.81%), Query Frame = 0


Query: 74  SASKNSLAYLQTPNAAQTVF-PYINVAPLPIFHGSADECPVIHLSRFAKVCRANNATSID 133
           SAS + + +L     +QT +  Y+N+A  PIF G ++ECP  HLSRFAKVCRANN +SID
Sbjct: 92  SASHSPILHLPQQPVSQTGYNSYMNIAQFPIFRGGSEECPFAHLSRFAKVCRANNVSSID 151

Query: 134 MMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQR 193
           MMM+IFPVTLE EAALWYDLN+EPY  +SWEE+KS F  A+ KIELT+QLRS+LMTI Q 
Sbjct: 152 MMMKIFPVTLEDEAALWYDLNVEPYEELSWEEIKSSFYHAYGKIELTEQLRSQLMTINQG 211

Query: 194 EEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRL 253
           + ESVR YFLRLQ ILKKWP  + LSD LLK +FVDGLR +F+EWM  QKP SLN+ALRL
Sbjct: 212 DAESVRSYFLRLQWILKKWPE-HGLSDDLLKGVFVDGLRGDFQEWMAPQKPGSLNKALRL 271

Query: 254 AFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLW----------KSREKKN 313
           AF FEQV+++    +   ++CGFC G HEE  CEVRERMR+LW          K   ++N
Sbjct: 272 AFCFEQVKSIRNVRRNASVKCGFCGGLHEERGCEVRERMRELWLKSNKDDGLGKGMLERN 331

Query: 314 TVDV---VQSDGREAAMATAELMRSSSAISRNESEVENDG----GEMVGLKKKSQCQCWK 373
            ++    V+  GR  +MAT+   RS+  + +N+ +VE DG     E+   KK+SQCQC K
Sbjct: 332 LIEKSEGVKELGRSVSMATS---RSTCVVGKND-QVEEDGKEEEDELGSKKKRSQCQCGK 391

[Close]

BLAST of Cla97C02G043590 vs. NCBI nr
Match: CAN62167.1 (hypothetical protein VITISV_007470 [Vitis vinifera])

HSP 1 Score: 318.5 bits (815), Expect = 3.0e-83
Identity = 192/370 (51.89%), Postives = 245/370 (66.22%), Query Frame = 0


Query: 20  DYTTATDYDASPSQSLYASNE------DDYDPSESVN--SHPTDPKS-KSLEIKPSDLRT 79
           DYT     + SPSQS Y  +E        Y  +ES +  + P D  S  +LE  P   ++
Sbjct: 161 DYT-----EQSPSQSPYEFDEXXXXXQSXYTDNESASGTNAPGDQFSLPALESIPKG-KS 220

Query: 80  AAESASKNSLAYLQTPNAAQTVFPYINVAPLPIFHGSADECPVIHLSRFAKVCRANNATS 139
              S+S NS +    P    +   YIN+APLPIF GS+DECPV HLSRF KVCRANN +S
Sbjct: 221 FRPSSSLNSSSNSLNPFXQSS---YINIAPLPIFRGSSDECPVTHLSRFTKVCRANNVSS 280

Query: 140 IDMMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELMTIK 199
           ++M+MRIFPVTL+GEAALWYDLNIEPY  +SWEE+KS FL A++++ LTD+LRSELM I 
Sbjct: 281 VEMIMRIFPVTLDGEAALWYDLNIEPYSSLSWEEIKSSFLQAYHRJGLTDELRSELMMIN 340

Query: 200 QREEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEAL 259
           Q  EESVR YFLRLQ ILK+W P + L DGLL+ IF+DGLR++F++W+I QKPSSLNEAL
Sbjct: 341 QGTEESVRSYFLRLQWILKRW-PDHGLPDGLLEGIFIDGLRKDFQDWIIPQKPSSLNEAL 400

Query: 260 RLAFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLWKSREKKNTVD----- 319
           RLAF +E+V+++    ++    CGFC G H+E  CE+RERMR LW  + KK T D     
Sbjct: 401 RLAFAWEKVQSIRGGREK---ECGFCSGGHDEEGCEIRERMRXLW-VKSKKQTRDYSGRI 460

Query: 320 VVQSDGREAAMATAELMRSSSAISRNESEVENDGGEMVGLKKKSQCQCWKHQCGMKKLDR 375
           V   DG +       +   S  + +NE E E      +G KKKSQCQC KHQC  KKL+R
Sbjct: 461 VNDEDGEKEFERRVSVGGESRBVGKNEEEGEEG---XMGWKKKSQCQCGKHQCWKKKLER 513

[Close]

BLAST of Cla97C02G043590 vs. NCBI nr
Match: EOX92844.1 (Uncharacterized protein TCM_001704 [Theobroma cacao])

HSP 1 Score: 317.8 bits (813), Expect = 5.0e-83
Identity = 185/370 (50.00%), Postives = 238/370 (64.32%), Query Frame = 0


Query: 20  DYTTATDYDASPSQS-----LYASNEDDYD-------PSESVNSHPTDPKSKSLEIKPSD 79
           +Y   T    SP +S         NE+DYD        SES+ + P  PK+    ++ + 
Sbjct: 41  NYVDNTSLSHSPDESNGDDLEQPRNENDYDDFDASDFQSESMTNAPNAPKTL---LRGNG 100

Query: 80  LRTAAESASKNSLAYLQTPNAAQTVFPYINVAPLPIFHGSADECPVIHLSRFAKVCRANN 139
           L  AA   S ++ A     N  +    YIN+APLPIF GS  +CPV HLSRFAKVCRANN
Sbjct: 101 LSAAASLNSVSNSAIWSRSNLIEAT-SYINIAPLPIFQGSPSDCPVTHLSRFAKVCRANN 160

Query: 140 ATSIDMMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELM 199
            +S+DMMMRIFPVTLE EA LWYDLNIEPYP + WEE+KS FL A++K ++T+QLR ELM
Sbjct: 161 VSSVDMMMRIFPVTLENEAGLWYDLNIEPYPSLRWEEIKSSFLQAYHKTQVTEQLRHELM 220

Query: 200 TIKQREEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLN 259
            I Q  EE VR YFLRLQ  L++W P + + + LLK IFVDGLRE+F++W++ QKP SL 
Sbjct: 221 MINQGSEERVRSYFLRLQWSLQRW-PDHGIPENLLKEIFVDGLREDFQDWIVPQKPDSLV 280

Query: 260 EALRLAFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLWKSREKKNTVDVV 319
           EALRLA  FEQ++++  S K+  L+C FCEG HEE  C+VRERM++LW+  + K  +D  
Sbjct: 281 EALRLAIAFEQLKSIKISRKKD-LKCDFCEGSHEERNCQVRERMKELWRKTKDKEWMDSS 340

Query: 320 Q-SDGREAAMATAELMRSSSAISRNESEVENDGGEMVG--LKKKSQCQCWKHQCGMKKLD 375
           + +   EA   +AE     SA  R E E   +G  + G   KKKS CQC KHQC  K+LD
Sbjct: 341 EKNQSNEAVNESAE----GSAEDRIEEENVVEGEMLSGRKQKKKSPCQCCKHQCWKKQLD 400

[Close]

BLAST of Cla97C02G043590 vs. NCBI nr
Match: OMO61075.1 (Retrotransposon gag protein [Corchorus olitorius])

HSP 1 Score: 310.5 bits (794), Expect = 8.0e-81
Identity = 169/347 (48.70%), Postives = 228/347 (65.71%), Query Frame = 0


Query: 40  EDDYDPSESVNSHPTDPKSKSLEIKPSDLRTAAESASKNSLAYLQ---TPNAAQTVFPYI 99
           EDDYD    V++     +S + + KPS+  +   SAS NS+   +     +  + +  YI
Sbjct: 73  EDDYD--NEVDASEYQSESMANDPKPSNNGSLGASASSNSITNSEIWTQSHVTEAISSYI 132

Query: 100 NVAPLPIFHGSADECPVIHLSRFAKVCRANNATSIDMMMRIFPVTLEGEAALWYDLNIEP 159
           N+AP PIF G  +ECPV HLSRFAKVCRANN +S+DMMMRIFP+TLE EA +WYDLNIEP
Sbjct: 133 NIAPFPIFRGGPNECPVTHLSRFAKVCRANNVSSVDMMMRIFPITLEDEAGIWYDLNIEP 192

Query: 160 YPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQREEESVRLYFLRLQLILKKWPPGNS 219
           YP +SWEE+KS FL A+NK ++++QLR EL  I Q  EE VR YFLRLQ  L++W P + 
Sbjct: 193 YPSLSWEEIKSSFLQAYNKTQVSEQLRHELTMINQGSEECVRSYFLRLQWSLRRW-PDHG 252

Query: 220 LSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRLAFGFEQVRTVSTSGKRGFLRCGFC 279
           + + L+K IFVDGL+E+F++W+I QKP SL EALRLAF +EQV+ +    K+  L+C FC
Sbjct: 253 IPETLIKEIFVDGLKEDFQDWIIPQKPDSLAEALRLAFAYEQVKNIKLLRKKD-LKCDFC 312

Query: 280 EGPHEELVCEVRERMRQLWKSREKKNTVDVVQSDGREAAMATAELMRSSSAISRNESEVE 339
            G HEE  C VRE+M+ LW+  + K  +D                  SSS++ ++ES  E
Sbjct: 313 GGQHEERSCLVREKMKGLWQRAKDKQLID------------------SSSSLKKDESNEE 372

Query: 340 -------NDGGEMV--GLKKKSQCQCWKHQCGMKKLDRNLSMVSKNS 375
                  ++ GEM+  G KKKSQCQC KH+C  K+L R+ S++S+NS
Sbjct: 373 VKETIDGDEEGEMMLNGKKKKSQCQCSKHRCWKKQLQRSSSLISRNS 397

[Close]

BLAST of Cla97C02G043590 vs. TrEMBL
Match: tr|A0A2P4KM35|A0A2P4KM35_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47498 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.5e-87
Identity = 185/338 (54.73%), Postives = 234/338 (69.23%), Query Frame = 0


Query: 39  NEDDYDPSESVNSHPTDPKSKSLEIKPS---DLRTAAESASKNSLAYLQTPNAAQTVFPY 98
           N+D Y  SES  S P D  S  L    S   +L T     S ++   +  P +   +  Y
Sbjct: 152 NDDAYIGSESETSAPGDRFSSQLRDPDSQSINLSTTVFPNSTSNFPKISQPPSTH-LASY 211

Query: 99  INVAPLPIFHGSADECPVIHLSRFAKVCRANNATSIDMMMRIFPVTLEGEAALWYDLNIE 158
           +N+AP PIFHG+ +ECPV H+SRFAKVC ANN ++ DMMMRIFPVTLE EAALWYDLNIE
Sbjct: 212 MNIAPFPIFHGNPNECPVKHVSRFAKVCVANNVSTTDMMMRIFPVTLEDEAALWYDLNIE 271

Query: 159 PYPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQREEESVRLYFLRLQLILKKWPPGN 218
           PYP ++WEE+KS FL A++KIE+ DQLRSELM I Q +EESVR YFLRLQ ILK+W P +
Sbjct: 272 PYPSLTWEEIKSSFLHAYHKIEVVDQLRSELMMINQGDEESVRSYFLRLQWILKQW-PDH 331

Query: 219 SLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRLAFGFEQVRTVSTSGKRGFLRCGF 278
            +SDGLLK +F+DGLREEF++W+I QKP SL+EALRLAFGFEQV+++    K   L+CGF
Sbjct: 332 GISDGLLKGVFIDGLREEFRDWIIPQKPDSLHEALRLAFGFEQVKSIRAVRKE--LKCGF 391

Query: 279 CEGPHEELVCEVRERMRQLWKSREKKNTVDVVQSDGREAAMATAELMRSSSAISRNESEV 338
           C+G HEE  CEVRERMR+LW+  ++K    V+    R       EL+RS S I  + S  
Sbjct: 392 CDGMHEERDCEVRERMRKLWRESKEKEEAVVLAKSTRSDDELGKELVRSVS-IGASSSVG 451

Query: 339 ENDGGEMVGLK--KKSQCQCWKHQCGMKKLDRNLSMVS 372
           +N+ GE  G    KK+Q Q WK+Q  MKKL+RN S++S
Sbjct: 452 KNNEGEEGGFMDGKKNQFQYWKYQRWMKKLERNNSLIS 484

[Close]

BLAST of Cla97C02G043590 vs. TrEMBL
Match: tr|W9R9S0|W9R9S0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004813 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85
Identity = 176/318 (55.35%), Postives = 222/318 (69.81%), Query Frame = 0


Query: 74  SASKNSLAYLQTPNAAQTVF-PYINVAPLPIFHGSADECPVIHLSRFAKVCRANNATSID 133
           SAS + + +L     +QT +  Y+N+A  PIF G ++ECP  HLSRFAKVCRANN +SID
Sbjct: 92  SASHSPILHLPQQPVSQTGYNSYMNIAQFPIFRGGSEECPFAHLSRFAKVCRANNVSSID 151

Query: 134 MMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQR 193
           MMM+IFPVTLE EAALWYDLN+EPY  +SWEE+KS F  A+ KIELT+QLRS+LMTI Q 
Sbjct: 152 MMMKIFPVTLEDEAALWYDLNVEPYEELSWEEIKSSFYHAYGKIELTEQLRSQLMTINQG 211

Query: 194 EEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRL 253
           + ESVR YFLRLQ ILKKWP  + LSD LLK +FVDGLR +F+EWM  QKP SLN+ALRL
Sbjct: 212 DAESVRSYFLRLQWILKKWPE-HGLSDDLLKGVFVDGLRGDFQEWMAPQKPGSLNKALRL 271

Query: 254 AFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLW----------KSREKKN 313
           AF FEQV+++    +   ++CGFC G HEE  CEVRERMR+LW          K   ++N
Sbjct: 272 AFCFEQVKSIRNVRRNASVKCGFCGGLHEERGCEVRERMRELWLKSNKDDGLGKGMLERN 331

Query: 314 TVDV---VQSDGREAAMATAELMRSSSAISRNESEVENDG----GEMVGLKKKSQCQCWK 373
            ++    V+  GR  +MAT+   RS+  + +N+ +VE DG     E+   KK+SQCQC K
Sbjct: 332 LIEKSEGVKELGRSVSMATS---RSTCVVGKND-QVEEDGKEEEDELGSKKKRSQCQCGK 391

[Close]

BLAST of Cla97C02G043590 vs. TrEMBL
Match: tr|A0A061DJI4|A0A061DJI4_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001704 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.3e-83
Identity = 185/370 (50.00%), Postives = 238/370 (64.32%), Query Frame = 0


Query: 20  DYTTATDYDASPSQS-----LYASNEDDYD-------PSESVNSHPTDPKSKSLEIKPSD 79
           +Y   T    SP +S         NE+DYD        SES+ + P  PK+    ++ + 
Sbjct: 41  NYVDNTSLSHSPDESNGDDLEQPRNENDYDDFDASDFQSESMTNAPNAPKTL---LRGNG 100

Query: 80  LRTAAESASKNSLAYLQTPNAAQTVFPYINVAPLPIFHGSADECPVIHLSRFAKVCRANN 139
           L  AA   S ++ A     N  +    YIN+APLPIF GS  +CPV HLSRFAKVCRANN
Sbjct: 101 LSAAASLNSVSNSAIWSRSNLIEAT-SYINIAPLPIFQGSPSDCPVTHLSRFAKVCRANN 160

Query: 140 ATSIDMMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELM 199
            +S+DMMMRIFPVTLE EA LWYDLNIEPYP + WEE+KS FL A++K ++T+QLR ELM
Sbjct: 161 VSSVDMMMRIFPVTLENEAGLWYDLNIEPYPSLRWEEIKSSFLQAYHKTQVTEQLRHELM 220

Query: 200 TIKQREEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLN 259
            I Q  EE VR YFLRLQ  L++W P + + + LLK IFVDGLRE+F++W++ QKP SL 
Sbjct: 221 MINQGSEERVRSYFLRLQWSLQRW-PDHGIPENLLKEIFVDGLREDFQDWIVPQKPDSLV 280

Query: 260 EALRLAFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLWKSREKKNTVDVV 319
           EALRLA  FEQ++++  S K+  L+C FCEG HEE  C+VRERM++LW+  + K  +D  
Sbjct: 281 EALRLAIAFEQLKSIKISRKKD-LKCDFCEGSHEERNCQVRERMKELWRKTKDKEWMDSS 340

Query: 320 Q-SDGREAAMATAELMRSSSAISRNESEVENDGGEMVG--LKKKSQCQCWKHQCGMKKLD 375
           + +   EA   +AE     SA  R E E   +G  + G   KKKS CQC KHQC  K+LD
Sbjct: 341 EKNQSNEAVNESAE----GSAEDRIEEENVVEGEMLSGRKQKKKSPCQCCKHQCWKKQLD 400

[Close]

BLAST of Cla97C02G043590 vs. TrEMBL
Match: tr|A5C7E6|A5C7E6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007470 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.7e-83
Identity = 192/370 (51.89%), Postives = 244/370 (65.95%), Query Frame = 0


Query: 20  DYTTATDYDASPSQSLYASNE------DDYDPSESVN--SHPTDPKS-KSLEIKPSDLRT 79
           DYT     + SPSQS Y  +E        Y  +ES +  + P D  S  +LE  P   ++
Sbjct: 161 DYT-----EQSPSQSPYEFDEXXXXXQSXYTDNESASGTNAPGDQFSLPALESIPKG-KS 220

Query: 80  AAESASKNSLAYLQTPNAAQTVFPYINVAPLPIFHGSADECPVIHLSRFAKVCRANNATS 139
              S+S NS +    P    +   YIN+APLPIF GS+DECPV HLSRF KVCRANN +S
Sbjct: 221 FRPSSSLNSSSNSLNPFXQSS---YINIAPLPIFRGSSDECPVTHLSRFTKVCRANNVSS 280

Query: 140 IDMMMRIFPVTLEGEAALWYDLNIEPYPPISWEELKSCFLDAFNKIELTDQLRSELMTIK 199
           ++M+MRIFPVTL+GEAALWYDLNIEPY  +SWEE+KS FL A+++  LTD+LRSELM I 
Sbjct: 281 VEMIMRIFPVTLDGEAALWYDLNIEPYSSLSWEEIKSSFLQAYHRXGLTDELRSELMMIN 340

Query: 200 QREEESVRLYFLRLQLILKKWPPGNSLSDGLLKTIFVDGLREEFKEWMILQKPSSLNEAL 259
           Q  EESVR YFLRLQ ILK+W P + L DGLL+ IF+DGLR++F++W+I QKPSSLNEAL
Sbjct: 341 QGTEESVRSYFLRLQWILKRW-PDHGLPDGLLEGIFIDGLRKDFQDWIIPQKPSSLNEAL 400

Query: 260 RLAFGFEQVRTVSTSGKRGFLRCGFCEGPHEELVCEVRERMRQLWKSREKKNTVD----- 319
           RLAF +E+V+++    ++    CGFC G H+E  CE+RERMR LW  + KK T D     
Sbjct: 401 RLAFAWEKVQSIRGGREK---ECGFCSGGHDEEGCEIRERMRXLW-VKSKKQTRDYSGRI 460

Query: 320 VVQSDGREAAMATAELMRSSSAISRNESEVENDGGEMVGLKKKSQCQCWKHQCGMKKLDR 375
           V   DG +       +   S  + +NE E E      +G KKKSQCQC KHQC  KKL+R
Sbjct: 461 VNDEDGEKEFERRVSVGGESRBVGKNEEEGEEG---XMGWKKKSQCQCGKHQCWKKKLER 513

[Close]

BLAST of Cla97C02G043590 vs. TrEMBL
Match: tr|A0A1R3GSI9|A0A1R3GSI9_9ROSI (Retrotransposon gag protein OS=Corchorus olitorius OX=93759 GN=COLO4_33577 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.3e-81
Identity = 169/347 (48.70%), Postives = 228/347 (65.71%), Query Frame = 0


Query: 40  EDDYDPSESVNSHPTDPKSKSLEIKPSDLRTAAESASKNSLAYLQ---TPNAAQTVFPYI 99
           EDDYD    V++     +S + + KPS+  +   SAS NS+   +     +  + +  YI
Sbjct: 73  EDDYD--NEVDASEYQSESMANDPKPSNNGSLGASASSNSITNSEIWTQSHVTEAISSYI 132

Query: 100 NVAPLPIFHGSADECPVIHLSRFAKVCRANNATSIDMMMRIFPVTLEGEAALWYDLNIEP 159
           N+AP PIF G  +ECPV HLSRFAKVCRANN +S+DMMMRIFP+TLE EA +WYDLNIEP
Sbjct: 133 NIAPFPIFRGGPNECPVTHLSRFAKVCRANNVSSVDMMMRIFPITLEDEAGIWYDLNIEP 192

Query: 160 YPPISWEELKSCFLDAFNKIELTDQLRSELMTIKQREEESVRLYFLRLQLILKKWPPGNS 219
           YP +SWEE+KS FL A+NK ++++QLR EL  I Q  EE VR YFLRLQ  L++W P + 
Sbjct: 193 YPSLSWEEIKSSFLQAYNKTQVSEQLRHELTMINQGSEECVRSYFLRLQWSLRRW-PDHG 252

Query: 220 LSDGLLKTIFVDGLREEFKEWMILQKPSSLNEALRLAFGFEQVRTVSTSGKRGFLRCGFC 279
           + + L+K IFVDGL+E+F++W+I QKP SL EALRLAF +EQV+ +    K+  L+C FC
Sbjct: 253 IPETLIKEIFVDGLKEDFQDWIIPQKPDSLAEALRLAFAYEQVKNIKLLRKKD-LKCDFC 312

Query: 280 EGPHEELVCEVRERMRQLWKSREKKNTVDVVQSDGREAAMATAELMRSSSAISRNESEVE 339
            G HEE  C VRE+M+ LW+  + K  +D                  SSS++ ++ES  E
Sbjct: 313 GGQHEERSCLVREKMKGLWQRAKDKQLID------------------SSSSLKKDESNEE 372

Query: 340 -------NDGGEMV--GLKKKSQCQCWKHQCGMKKLDRNLSMVSKNS 375
                  ++ GEM+  G KKKSQCQC KH+C  K+L R+ S++S+NS
Sbjct: 373 VKETIDGDEEGEMMLNGKKKKSQCQCSKHRCWKKQLQRSSSLISRNS 397

The following BLAST results are available for this feature:

BLAST of Cla97C02G043590 vs. NCBI nr


Match Name	E-value	Identity	Description
POE94094.1	1.3e-86	54.73	hypothetical protein CFP56_47498 [Quercus suber]	[more]
EXB78111.1	4.1e-85	55.35	hypothetical protein L484_004813 [Morus notabilis]	[more]
CAN62167.1	3.0e-83	51.89	hypothetical protein VITISV_007470 [Vitis vinifera]	[more]
EOX92844.1	5.0e-83	50.00	Uncharacterized protein TCM_001704 [Theobroma cacao]	[more]
OMO61075.1	8.0e-81	48.70	Retrotransposon gag protein [Corchorus olitorius]	[more]

BLAST of Cla97C02G043590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P4KM35\|A0A2P4KM35_QUESU	8.5e-87	54.73	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47498 PE=4 SV=1	[more]
tr\|W9R9S0\|W9R9S0_9ROSA	2.7e-85	55.35	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004813 PE=4 SV=1	[more]
tr\|A0A061DJI4\|A0A061DJI4_THECC	3.3e-83	50.00	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001704 PE=4 SV=1	[more]
tr\|A5C7E6\|A5C7E6_VITVI	5.7e-83	51.89	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007470 PE=4 SV=1	[more]
tr\|A0A1R3GSI9\|A0A1R3GSI9_9ROSI	5.3e-81	48.70	Retrotransposon gag protein OS=Corchorus olitorius OX=93759 GN=COLO4_33577 PE=4 ...	[more]

BLAST of Cla97C02G043590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G043590 vs. TAIR10


Match Name	E-value	Identity	Description

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005162	Retrotrans_gag_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G043590.1	Cla97C02G043590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 136..232 e-value: 2.9E-10 score: 40.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..341
None	No IPR available	PANTHER	PTHR33223	FAMILY NOT NAMED	coord: 95..260

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G043590	Cla013544	Watermelon (97103) v1	wmwmbB316
Cla97C02G043590	ClCG02G017800	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G043590	CmaCh02G000800	Cucurbita maxima (Rimu)	cmawmbB622
Cla97C02G043590	CmoCh02G000780	Cucurbita moschata (Rifu)	cmowmbB597
Cla97C02G043590	Lsi10G015890	Bottle gourd (USVL1VR-Ls)	lsiwmbB050
Cla97C02G043590	Bhi10G000829	Wax gourd	wgowmbB361

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G043590	Watermelon (97103) v2	wmbwmbB105
Cla97C02G043590	Silver-seed gourd	carwmbB0024
Cla97C02G043590	Silver-seed gourd	carwmbB0751
Cla97C02G043590	Silver-seed gourd	carwmbB0438
Cla97C02G043590	Cucumber (Gy14) v2	cgybwmbB497
Cla97C02G043590	Cucurbita maxima (Rimu)	cmawmbB103
Cla97C02G043590	Cucurbita maxima (Rimu)	cmawmbB222
Cla97C02G043590	Cucurbita maxima (Rimu)	cmawmbB528
Cla97C02G043590	Cucurbita maxima (Rimu)	cmawmbB568
Cla97C02G043590	Cucurbita maxima (Rimu)	cmawmbB587
Cla97C02G043590	Cucurbita maxima (Rimu)	cmawmbB630
Cla97C02G043590	Cucurbita moschata (Rifu)	cmowmbB090
Cla97C02G043590	Cucurbita moschata (Rifu)	cmowmbB205
Cla97C02G043590	Cucurbita moschata (Rifu)	cmowmbB508
Cla97C02G043590	Cucurbita moschata (Rifu)	cmowmbB545
Cla97C02G043590	Cucurbita moschata (Rifu)	cmowmbB566
Cla97C02G043590	Cucurbita moschata (Rifu)	cmowmbB603
Cla97C02G043590	Wild cucumber (PI 183967)	cpiwmbB547
Cla97C02G043590	Cucumber (Chinese Long) v3	cucwmbB542
Cla97C02G043590	Cucumber (Chinese Long) v2	cuwmbB523
Cla97C02G043590	Bottle gourd (USVL1VR-Ls)	lsiwmbB052
Cla97C02G043590	Bottle gourd (USVL1VR-Ls)	lsiwmbB083
Cla97C02G043590	Melon (DHL92) v3.6.1	medwmbB171
Cla97C02G043590	Melon (DHL92) v3.5.1	mewmbB185
Cla97C02G043590	Watermelon (Charleston Gray)	wcgwmbB298
Cla97C02G043590	Watermelon (97103) v1	wmwmbB156
Cla97C02G043590	Wax gourd	wgowmbB245
Cla97C02G043590	Wax gourd	wgowmbB368