Cla97C02G041940 (gene) Watermelon (97103) v2

Overview
NameCla97C02G041940
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionTMV resistance protein N-like isoform X2
LocationCla97Chr02 : 29766071 .. 29766577 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAGGAATATTATGAAGATGGACAATTCAAACAACTCATATTAATGAATTGTGATATTCCAGAATGGTACAGTTACAAGAGTATGAAAAATCCAATAACATTTTTTTTGCCATCTGATTATCCAAGTTGGAAATGGAAAGCTTTTGCACCTTGTGTCAAATTTCAAGTCAATAATGTCGGGCGTGATCTTTGGAGTCAGCTTGAATGTAAAGTGTTTATCAACGATATTCAAGTATGGAGTTCTGGAGAGGTATATTCCTTTCTTGATGAATGGAGAAGGATGAATATAAAACCATCACCATGTGAGTATATGTGGTTGATAGTACTTCATCCTTGTTTAGATTTCCAACCATATTGGGATGATATTAATCCAAGTTTTGGGATTAATTCCTCAGAAAGTACTTGGAATAAATTTACAGTGTCGTTTGAGGTTCCTTCCAGGTTTGAAGACTATAAAGTAAGTGTAAAAAGGTGTGGTGTTCATGTCATCATGGAGGAATGA

mRNA sequence

ATGGTGCAGGAATATTATGAAGATGGACAATTCAAACAACTCATATTAATGAATTGTGATATTCCAGAATGGTACAGTTACAAGAGTATGAAAAATCCAATAACATTTTTTTTGCCATCTGATTATCCAAGTTGGAAATGGAAAGCTTTTGCACCTTGTGTCAAATTTCAAGTCAATAATGTCGGGCGTGATCTTTGGAGTCAGCTTGAATGTAAAGTGTTTATCAACGATATTCAAGTATGGAGTTCTGGAGAGGTATATTCCTTTCTTGATGAATGGAGAAGGATGAATATAAAACCATCACCATGTGAGTATATGTGGTTGATAGTACTTCATCCTTGTTTAGATTTCCAACCATATTGGGATGATATTAATCCAAGTTTTGGGATTAATTCCTCAGAAAGTACTTGGAATAAATTTACAGTGTCGTTTGAGGTTCCTTCCAGGTTTGAAGACTATAAAGTAAGTGTAAAAAGGTGTGGTGTTCATGTCATCATGGAGGAATGA

Coding sequence (CDS)

ATGGTGCAGGAATATTATGAAGATGGACAATTCAAACAACTCATATTAATGAATTGTGATATTCCAGAATGGTACAGTTACAAGAGTATGAAAAATCCAATAACATTTTTTTTGCCATCTGATTATCCAAGTTGGAAATGGAAAGCTTTTGCACCTTGTGTCAAATTTCAAGTCAATAATGTCGGGCGTGATCTTTGGAGTCAGCTTGAATGTAAAGTGTTTATCAACGATATTCAAGTATGGAGTTCTGGAGAGGTATATTCCTTTCTTGATGAATGGAGAAGGATGAATATAAAACCATCACCATGTGAGTATATGTGGTTGATAGTACTTCATCCTTGTTTAGATTTCCAACCATATTGGGATGATATTAATCCAAGTTTTGGGATTAATTCCTCAGAAAGTACTTGGAATAAATTTACAGTGTCGTTTGAGGTTCCTTCCAGGTTTGAAGACTATAAAGTAAGTGTAAAAAGGTGTGGTGTTCATGTCATCATGGAGGAATGA

Protein sequence

MVQEYYEDGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWSQLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWDDINPSFGINSSESTWNKFTVSFEVPSRFEDYKVSVKRCGVHVIMEE
Homology
[Close]
BLAST of Cla97C02G041940 vs. NCBI nr
Match: XP_008465653.2 (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53
Identity = 111/190 (58.42%), Postives = 134/190 (70.53%), Query Frame = 0 

Query: 8   DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
           DGQFKQLILMNCDIP+W+SYKS  NPIT F+PS+ P W+ K FAPCVKFQVN+V R+ + 
Sbjct: 296 DGQFKQLILMNCDIPDWFSYKSRNNPITIFMPSNDPCWELKVFAPCVKFQVNHVDRNRYM 355

Query: 68  QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWDDI--- 127
            LECK+FINDIQVWSS EV  FL+E RR+ I+ SP EYMWL+VL+P +DF    DDI   
Sbjct: 356 DLECKMFINDIQVWSSEEV-PFLEESRRILIEASPYEYMWLLVLYPHIDFPLNSDDIIKR 415

Query: 128 -------NPSFGINSS-------------------ESTWNKFTVSFEVPSRFEDYKVSVK 169
                   PSFGI++S                   ESTW+KFTVSF V S+++D +VS+K
Sbjct: 416 SQEINLHQPSFGISNSMGRDNNNCNVDDDRRNHFGESTWSKFTVSFGVNSKYKDSEVSIK 475

[Close]
BLAST of Cla97C02G041940 vs. NCBI nr
Match: KGN60880.1 (hypothetical protein Csa_2G021510 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 109/190 (57.37%), Postives = 130/190 (68.42%), Query Frame = 0 

Query: 8    DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
            DG FKQLILMNCDIP+W+SYKS  N IT F+PS+ PSW+ K FAPCVKFQVN+V R+ + 
Sbjct: 863  DGHFKQLILMNCDIPDWFSYKSRNNHITIFMPSNDPSWEMKVFAPCVKFQVNHVDRNRYM 922

Query: 68   QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDF---------- 127
             LECK+FINDIQVWSS EV   L+E RR+ I+ SP EYMWL+VL+P +DF          
Sbjct: 923  DLECKMFINDIQVWSSEEV-PCLEESRRILIEESPYEYMWLLVLYPHIDFPLNSEDIVKR 982

Query: 128  -QPYWDDINPSFGINS------------------SESTWNKFTVSFEVPSRFEDYKVSVK 169
             Q Y++   PSFGINS                   ES W KFTVSF V S+F+D +VS+K
Sbjct: 983  SQEYFNLHQPSFGINSMGRDNNNCNVDDDRRNHFGESIWRKFTVSFGVNSKFKDSQVSIK 1042

[Close]
BLAST of Cla97C02G041940 vs. NCBI nr
Match: XP_011648801.1 (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 109/190 (57.37%), Postives = 130/190 (68.42%), Query Frame = 0 

Query: 8   DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
           DG FKQLILMNCDIP+W+SYKS  N IT F+PS+ PSW+ K FAPCVKFQVN+V R+ + 
Sbjct: 627 DGHFKQLILMNCDIPDWFSYKSRNNHITIFMPSNDPSWEMKVFAPCVKFQVNHVDRNRYM 686

Query: 68  QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDF---------- 127
            LECK+FINDIQVWSS EV   L+E RR+ I+ SP EYMWL+VL+P +DF          
Sbjct: 687 DLECKMFINDIQVWSSEEV-PCLEESRRILIEESPYEYMWLLVLYPHIDFPLNSEDIVKR 746

Query: 128 -QPYWDDINPSFGINS------------------SESTWNKFTVSFEVPSRFEDYKVSVK 169
            Q Y++   PSFGINS                   ES W KFTVSF V S+F+D +VS+K
Sbjct: 747 SQEYFNLHQPSFGINSMGRDNNNCNVDDDRRNHFGESIWRKFTVSFGVNSKFKDSQVSIK 806

[Close]
BLAST of Cla97C02G041940 vs. NCBI nr
Match: XP_008454955.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 107/178 (60.11%), Postives = 122/178 (68.54%), Query Frame = 0 

Query: 4    EYYEDGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKA-FAPCVKFQVNNVG 63
            E  + G+ KQL+LMNCDIP+WY YKSM + +TFFLP+DYPSWKWKA FAPCVKF+V N  
Sbjct: 899  ECCKGGELKQLVLMNCDIPDWYRYKSMNDSLTFFLPADYPSWKWKALFAPCVKFEVTN-- 958

Query: 64   RDLWSQLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWD 123
             D + +LECKVFINDIQVWSS EVY    E   M  K SP EYMWLIVL P   FQ Y D
Sbjct: 959  DDWFQKLECKVFINDIQVWSSEEVYPNQKERSGMFGKVSPGEYMWLIVLDPHTHFQSYSD 1018

Query: 124  DI------------NPSFGINSSESTWNKFTVSFEVPSRFEDYKVSVKRCGVHVIMEE 169
            DI             PSFGINSS+S   K TVSF+V   ++D  VS+K CGVHVIM E
Sbjct: 1019 DIMDRRSPKIIDLNQPSFGINSSQSILGKITVSFQVTPWYKDV-VSIKMCGVHVIMWE 1073

[Close]
BLAST of Cla97C02G041940 vs. NCBI nr
Match: XP_016901532.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 107/190 (56.32%), Postives = 126/190 (66.32%), Query Frame = 0 

Query: 8    DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
            DGQFKQLILMNCDIP+W+SYKS  NPIT  +PS+ PS + K FA CVKFQVN+V +D + 
Sbjct: 897  DGQFKQLILMNCDIPDWFSYKSRNNPITLLVPSNDPSSELKVFAACVKFQVNHVDQDQYM 956

Query: 68   QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWDDI--- 127
             LECKVFINDIQVWS  EV  F DE R + IK SP EYMWL+VL+P ++F+   DDI   
Sbjct: 957  DLECKVFINDIQVWSYEEV-PFHDESRSILIKASPHEYMWLLVLYPHINFRLNSDDIINR 1016

Query: 128  -------NPSFGINS-------------------SESTWNKFTVSFEVPSRFEDYKVSVK 169
                    PSFGINS                    ES W KFTVSF V S+F+D ++S+K
Sbjct: 1017 SQEINLHQPSFGINSIGRDNNNCNVDDDYRRNHIGESIWRKFTVSFGVTSKFKDSELSIK 1076

[Close]
BLAST of Cla97C02G041940 vs. TrEMBL
Match: tr|A0A1S3CPD4|A0A1S3CPD4_CUCME (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503294 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.6e-53
Identity = 111/190 (58.42%), Postives = 134/190 (70.53%), Query Frame = 0 

Query: 8   DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
           DGQFKQLILMNCDIP+W+SYKS  NPIT F+PS+ P W+ K FAPCVKFQVN+V R+ + 
Sbjct: 296 DGQFKQLILMNCDIPDWFSYKSRNNPITIFMPSNDPCWELKVFAPCVKFQVNHVDRNRYM 355

Query: 68  QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWDDI--- 127
            LECK+FINDIQVWSS EV  FL+E RR+ I+ SP EYMWL+VL+P +DF    DDI   
Sbjct: 356 DLECKMFINDIQVWSSEEV-PFLEESRRILIEASPYEYMWLLVLYPHIDFPLNSDDIIKR 415

Query: 128 -------NPSFGINSS-------------------ESTWNKFTVSFEVPSRFEDYKVSVK 169
                   PSFGI++S                   ESTW+KFTVSF V S+++D +VS+K
Sbjct: 416 SQEINLHQPSFGISNSMGRDNNNCNVDDDRRNHFGESTWSKFTVSFGVNSKYKDSEVSIK 475

[Close]
BLAST of Cla97C02G041940 vs. TrEMBL
Match: tr|A0A0A0LFP7|A0A0A0LFP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-51
Identity = 109/190 (57.37%), Postives = 130/190 (68.42%), Query Frame = 0 

Query: 8    DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
            DG FKQLILMNCDIP+W+SYKS  N IT F+PS+ PSW+ K FAPCVKFQVN+V R+ + 
Sbjct: 863  DGHFKQLILMNCDIPDWFSYKSRNNHITIFMPSNDPSWEMKVFAPCVKFQVNHVDRNRYM 922

Query: 68   QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDF---------- 127
             LECK+FINDIQVWSS EV   L+E RR+ I+ SP EYMWL+VL+P +DF          
Sbjct: 923  DLECKMFINDIQVWSSEEV-PCLEESRRILIEESPYEYMWLLVLYPHIDFPLNSEDIVKR 982

Query: 128  -QPYWDDINPSFGINS------------------SESTWNKFTVSFEVPSRFEDYKVSVK 169
             Q Y++   PSFGINS                   ES W KFTVSF V S+F+D +VS+K
Sbjct: 983  SQEYFNLHQPSFGINSMGRDNNNCNVDDDRRNHFGESIWRKFTVSFGVNSKFKDSQVSIK 1042

[Close]
BLAST of Cla97C02G041940 vs. TrEMBL
Match: tr|A0A1S3C0Y9|A0A1S3C0Y9_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495240 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 107/178 (60.11%), Postives = 122/178 (68.54%), Query Frame = 0 

Query: 4    EYYEDGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKA-FAPCVKFQVNNVG 63
            E  + G+ KQL+LMNCDIP+WY YKSM + +TFFLP+DYPSWKWKA FAPCVKF+V N  
Sbjct: 899  ECCKGGELKQLVLMNCDIPDWYRYKSMNDSLTFFLPADYPSWKWKALFAPCVKFEVTN-- 958

Query: 64   RDLWSQLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWD 123
             D + +LECKVFINDIQVWSS EVY    E   M  K SP EYMWLIVL P   FQ Y D
Sbjct: 959  DDWFQKLECKVFINDIQVWSSEEVYPNQKERSGMFGKVSPGEYMWLIVLDPHTHFQSYSD 1018

Query: 124  DI------------NPSFGINSSESTWNKFTVSFEVPSRFEDYKVSVKRCGVHVIMEE 169
            DI             PSFGINSS+S   K TVSF+V   ++D  VS+K CGVHVIM E
Sbjct: 1019 DIMDRRSPKIIDLNQPSFGINSSQSILGKITVSFQVTPWYKDV-VSIKMCGVHVIMWE 1073

[Close]
BLAST of Cla97C02G041940 vs. TrEMBL
Match: tr|A0A1S4DZW3|A0A1S4DZW3_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495278 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 107/190 (56.32%), Postives = 126/190 (66.32%), Query Frame = 0 

Query: 8    DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
            DGQFKQLILMNCDIP+W+SYKS  NPIT  +PS+ PS + K FA CVKFQVN+V +D + 
Sbjct: 897  DGQFKQLILMNCDIPDWFSYKSRNNPITLLVPSNDPSSELKVFAACVKFQVNHVDQDQYM 956

Query: 68   QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWDDI--- 127
             LECKVFINDIQVWS  EV  F DE R + IK SP EYMWL+VL+P ++F+   DDI   
Sbjct: 957  DLECKVFINDIQVWSYEEV-PFHDESRSILIKASPHEYMWLLVLYPHINFRLNSDDIINR 1016

Query: 128  -------NPSFGINS-------------------SESTWNKFTVSFEVPSRFEDYKVSVK 169
                    PSFGINS                    ES W KFTVSF V S+F+D ++S+K
Sbjct: 1017 SQEINLHQPSFGINSIGRDNNNCNVDDDYRRNHIGESIWRKFTVSFGVTSKFKDSELSIK 1076

[Close]
BLAST of Cla97C02G041940 vs. TrEMBL
Match: tr|A0A1S3C131|A0A1S3C131_CUCME (TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495278 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 107/190 (56.32%), Postives = 126/190 (66.32%), Query Frame = 0 

Query: 8   DGQFKQLILMNCDIPEWYSYKSMKNPITFFLPSDYPSWKWKAFAPCVKFQVNNVGRDLWS 67
           DGQFKQLILMNCDIP+W+SYKS  NPIT  +PS+ PS + K FA CVKFQVN+V +D + 
Sbjct: 794 DGQFKQLILMNCDIPDWFSYKSRNNPITLLVPSNDPSSELKVFAACVKFQVNHVDQDQYM 853

Query: 68  QLECKVFINDIQVWSSGEVYSFLDEWRRMNIKPSPCEYMWLIVLHPCLDFQPYWDDI--- 127
            LECKVFINDIQVWS  EV  F DE R + IK SP EYMWL+VL+P ++F+   DDI   
Sbjct: 854 DLECKVFINDIQVWSYEEV-PFHDESRSILIKASPHEYMWLLVLYPHINFRLNSDDIINR 913

Query: 128 -------NPSFGINS-------------------SESTWNKFTVSFEVPSRFEDYKVSVK 169
                   PSFGINS                    ES W KFTVSF V S+F+D ++S+K
Sbjct: 914 SQEINLHQPSFGINSIGRDNNNCNVDDDYRRNHIGESIWRKFTVSFGVTSKFKDSELSIK 973

The following BLAST results are available for this feature:
BLAST of Cla97C02G041940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465653.22.4e-5358.42PREDICTED: TMV resistance protein N-like [Cucumis melo][more]
KGN60880.12.3e-5157.37hypothetical protein Csa_2G021510 [Cucumis sativus][more]
XP_011648801.12.3e-5157.37PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis sativus][more]
XP_008454955.12.4e-4860.11PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
XP_016901532.12.4e-4856.32PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
BLAST of Cla97C02G041940 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CPD4|A0A1S3CPD4_CUCME1.6e-5358.42TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503294 PE=4 SV=1[more]
tr|A0A0A0LFP7|A0A0A0LFP7_CUCSA1.5e-5157.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1[more]
tr|A0A1S3C0Y9|A0A1S3C0Y9_CUCME1.6e-4860.11TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495240... [more]
tr|A0A1S4DZW3|A0A1S4DZW3_CUCME1.6e-4856.32TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495278... [more]
tr|A0A1S3C131|A0A1S3C131_CUCME1.6e-4856.32TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495278... [more]
BLAST of Cla97C02G041940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G041940 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043531 ADP binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G041940.1Cla97C02G041940.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G041940CsGy2G003670Cucumber (Gy14) v2cgybwmbB114
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G041940Silver-seed gourdcarwmbB0746
Cla97C02G041940Cucumber (Gy14) v1cgywmbB100
Cla97C02G041940Cucumber (Chinese Long) v2cuwmbB118
Cla97C02G041940Cucurbita maxima (Rimu)cmawmbB175
Cla97C02G041940Cucurbita maxima (Rimu)cmawmbB810
Cla97C02G041940Cucurbita moschata (Rifu)cmowmbB161
Cla97C02G041940Cucurbita moschata (Rifu)cmowmbB785
Cla97C02G041940Wild cucumber (PI 183967)cpiwmbB120
Cla97C02G041940Cucumber (Chinese Long) v3cucwmbB123
Cla97C02G041940Bottle gourd (USVL1VR-Ls)lsiwmbB087
Cla97C02G041940Melon (DHL92) v3.6.1medwmbB367
Cla97C02G041940Melon (DHL92) v3.5.1mewmbB376
Cla97C02G041940Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G041940Watermelon (97103) v1wmwmbB316