Cla97C02G037540 (gene) Watermelon (97103) v2

Overview
NameCla97C02G037540
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr02 : 24627332 .. 24627757 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAGCTTGGACGACGAACTGCTGCAAGTTTTAGGTACAACTCATTTGTCGGCTTGTATTTATCTTCTGCTTTATTTGAGTATTCTAATTTCTCACTTGGGGTTTTTTTTTCTTTTCTTATTTATTTATTTATTTTTTAAAGTAGTGGGGTATTGATTTCCTGTTTAATGGTTAGCTTTTTGGATGCGTTATTGGGTTGCTGCTTGTTTTTAAATACTCGTAGCTACATACAAGTTCTTTTTCTTTCTTTCTTTCTTTTTATGGGTGGAATTAGGTTTCTGAATCTTTTGTTGGTTGATTTTGGTGGTAGAGAGTGAAATGGTGGAGGGTTTAAAAAGTGGGGAGTCTCCTAATCAGTGGTTACCTGCTGAAGCCCTGCAAATTGAAGAAGATTCAAAAACTGTGGGGTTTTGGAGATTATAG

mRNA sequence

ATGCTGAGCTTGGACGACGAACTGCTGCAAGTTTTAGAGAGTGAAATGGTGGAGGGTTTAAAAAGTGGGGAGTCTCCTAATCAGTGGTTACCTGCTGAAGCCCTGCAAATTGAAGAAGATTCAAAAACTGTGGGGTTTTGGAGATTATAG

Coding sequence (CDS)

ATGCTGAGCTTGGACGACGAACTGCTGCAAGTTTTAGAGAGTGAAATGGTGGAGGGTTTAAAAAGTGGGGAGTCTCCTAATCAGTGGTTACCTGCTGAAGCCCTGCAAATTGAAGAAGATTCAAAAACTGTGGGGTTTTGGAGATTATAG

Protein sequence

MLSLDDELLQVLESEMVEGLKSGESPNQWLPAEALQIEEDSKTVGFWRL
Homology
[Close]
BLAST of Cla97C02G037540 vs. NCBI nr
Match: KGN61934.1 (hypothetical protein Csa_2G270760 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 6.9e-09
Identity = 39/47 (82.98%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 1  MLSLDDELLQVL-ESEMVEGLKSGESPNQWLPAEALQIEEDSKTVGF 47
          MLSLDDE LQVL ESEMVEG KSGES NQ LPAEA +IEEDSK+VGF
Sbjct: 1  MLSLDDEPLQVLVESEMVEGFKSGESLNQRLPAEAPEIEEDSKSVGF 47

[Close]
BLAST of Cla97C02G037540 vs. TrEMBL
Match: tr|A0A0A0LLN3|A0A0A0LLN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270760 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-09
Identity = 39/47 (82.98%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 1  MLSLDDELLQVL-ESEMVEGLKSGESPNQWLPAEALQIEEDSKTVGF 47
          MLSLDDE LQVL ESEMVEG KSGES NQ LPAEA +IEEDSK+VGF
Sbjct: 1  MLSLDDEPLQVLVESEMVEGFKSGESLNQRLPAEAPEIEEDSKSVGF 47

The following BLAST results are available for this feature:
BLAST of Cla97C02G037540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61934.16.9e-0982.98hypothetical protein Csa_2G270760 [Cucumis sativus][more]
BLAST of Cla97C02G037540 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LLN3|A0A0A0LLN3_CUCSA4.6e-0982.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270760 PE=4 SV=1[more]
BLAST of Cla97C02G037540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G037540 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G037540.1Cla97C02G037540.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G037540Csa2G270760Cucumber (Chinese Long) v2cuwmbB115
Cla97C02G037540CSPI02G13560Wild cucumber (PI 183967)cpiwmbB117
Cla97C02G037540CsaV3_2G016080Cucumber (Chinese Long) v3cucwmbB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G037540Wax gourdwgowmbB254
Cla97C02G037540Wax gourdwgowmbB373
Cla97C02G037540Watermelon (97103) v2wmbwmbB089
Cla97C02G037540Silver-seed gourdcarwmbB0145
Cla97C02G037540Silver-seed gourdcarwmbB0325
Cla97C02G037540Silver-seed gourdcarwmbB0362
Cla97C02G037540Silver-seed gourdcarwmbB0842
Cla97C02G037540Silver-seed gourdcarwmbB1079
Cla97C02G037540Cucumber (Gy14) v2cgybwmbB110
Cla97C02G037540Cucumber (Gy14) v2cgybwmbB496
Cla97C02G037540Cucumber (Gy14) v1cgywmbB411
Cla97C02G037540Cucumber (Gy14) v1cgywmbB639
Cla97C02G037540Cucurbita maxima (Rimu)cmawmbB107
Cla97C02G037540Cucurbita maxima (Rimu)cmawmbB529
Cla97C02G037540Cucurbita maxima (Rimu)cmawmbB579
Cla97C02G037540Cucurbita maxima (Rimu)cmawmbB616
Cla97C02G037540Cucurbita maxima (Rimu)cmawmbB811
Cla97C02G037540Cucurbita moschata (Rifu)cmowmbB092
Cla97C02G037540Cucurbita moschata (Rifu)cmowmbB509
Cla97C02G037540Cucurbita moschata (Rifu)cmowmbB559
Cla97C02G037540Cucurbita moschata (Rifu)cmowmbB590
Cla97C02G037540Wild cucumber (PI 183967)cpiwmbB546
Cla97C02G037540Cucumber (Chinese Long) v3cucwmbB543
Cla97C02G037540Cucumber (Chinese Long) v2cuwmbB522
Cla97C02G037540Bottle gourd (USVL1VR-Ls)lsiwmbB044
Cla97C02G037540Bottle gourd (USVL1VR-Ls)lsiwmbB082
Cla97C02G037540Melon (DHL92) v3.6.1medwmbB101
Cla97C02G037540Melon (DHL92) v3.6.1medwmbB170
Cla97C02G037540Melon (DHL92) v3.5.1mewmbB108
Cla97C02G037540Melon (DHL92) v3.5.1mewmbB184
Cla97C02G037540Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G037540Watermelon (Charleston Gray)wcgwmbB144
Cla97C02G037540Watermelon (97103) v1wmwmbB316
Cla97C02G037540Watermelon (97103) v1wmwmbB327