Cla97C02G027990 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G027990
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	geranylgeranyl transferase type-2 subunit beta
Location	Cla97Chr02 : 1546793 .. 1547596 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGGGAAAATGGAGAATGGCAATAGAGGAAGGATTATCGGGAGAAGAAGAGAAAGAGGGAAAAATAAAATTAAGGGTAATTTTGTAACTTTGGCCGATAACAATGTAAGAGCAAAATTCTTAAGTTTCAAAGGGTGGGGCAAAAACTGTTTATCTAGTATCCGTTCATTCATACTCTCAGATGGTAGACTGCTATCCATTTATTCTATGTATGCATCCCACCTTAGGTTGTTTTATGTACAGAGAAAGGATGATTTTCAATCTGTGATGATGGAACATATTAGAATGATTGGTGCATACTGGGGGTTAACCACGCTGGATATTCTTGGAAAGCTAGATACTGTGGATATCGATGAAGTTGTTTCGTGGGTCTTGAAATGTCAGCATGAGTCAGGTTCTTAGCATTCTCTACTGTATCTACTTGTATGCCTTTTTTTCTATGTTAATATGGATACATTTTAGTTCGTTTGGAATAGATGTATGTGTTCAGTGTTATGCCATTAGTCTTGCACATCATACACATCAAAGTAACAAAGCTGTTACAGACTCAAGTTGAACAAAATTTCCCTTTTCTGCATGTTTGAGGATTTAGATGTGAATGTTGGATCACTTATAACAAAAGCAGAGAAGTGATACCTGATATATGCAGGTGGTTTTTCTGGAAACATTGGACGTGATCCGCACATACTTTACACCCTTAGTGCTGTACAAGTCTTGGCCCTATTTGACAAGTTGAATGTTTTAGATGTTGATAAGGTGACAGATTGTATCCTTTGGCATTTAGGAGTTGATTTTTAA

mRNA sequence

ATGGAGAAAGGGAAAATGGAGAATGGCAATAGAGGAAGGATTATCGGGAGAAGAAGAGAAAGAGGGAAAAATAAAATTAAGGGTAATTTTGTAACTTTGGCCGATAACAATGTAAGAGCAAAATTCTTAAGTTTCAAAGGGTGGGGCAAAAACTGTTTATCTAGTATCCGTTCATTCATACTCTCAGATGGTAGACTGCTATCCATTTATTCTATGTATGCATCCCACCTTAGGTTGTTTTATGTACAGAGAAAGGATGATTTTCAATCTGTGATGATGGAACATATTAGAATGATTGGTGCATACTGGGGGTTAACCACGCTGGATATTCTTGGAAAGCTAGATACTGTGGATATCGATGAAGTTGTTTCGTGGGTCTTGAAATGTCAGCATGAGTCAGGTGGTTTTTCTGGAAACATTGGACGTGATCCGCACATACTTTACACCCTTAGTGCTGTACAAGTCTTGGCCCTATTTGACAAGTTGAATGTTTTAGATGTTGATAAGGTGACAGATTGTATCCTTTGGCATTTAGGAGTTGATTTTTAA

Coding sequence (CDS)

ATGGAGAAAGGGAAAATGGAGAATGGCAATAGAGGAAGGATTATCGGGAGAAGAAGAGAAAGAGGGAAAAATAAAATTAAGGGTAATTTTGTAACTTTGGCCGATAACAATGTAAGAGCAAAATTCTTAAGTTTCAAAGGGTGGGGCAAAAACTGTTTATCTAGTATCCGTTCATTCATACTCTCAGATGGTAGACTGCTATCCATTTATTCTATGTATGCATCCCACCTTAGGTTGTTTTATGTACAGAGAAAGGATGATTTTCAATCTGTGATGATGGAACATATTAGAATGATTGGTGCATACTGGGGGTTAACCACGCTGGATATTCTTGGAAAGCTAGATACTGTGGATATCGATGAAGTTGTTTCGTGGGTCTTGAAATGTCAGCATGAGTCAGGTGGTTTTTCTGGAAACATTGGACGTGATCCGCACATACTTTACACCCTTAGTGCTGTACAAGTCTTGGCCCTATTTGACAAGTTGAATGTTTTAGATGTTGATAAGGTGACAGATTGTATCCTTTGGCATTTAGGAGTTGATTTTTAA

Protein sequence

MEKGKMENGNRGRIIGRRRERGKNKIKGNFVTLADNNVRAKFLSFKGWGKNCLSSIRSFILSDGRLLSIYSMYASHLRLFYVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGRDPHILYTLSAVQVLALFDKLNVLDVDKVTDCILWHLGVDF

Homology

[Close]

BLAST of Cla97C02G027990 vs. NCBI nr
Match: PPD73053.1 (hypothetical protein GOBAR_DD30048 [Gossypium barbadense])

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 71/94 (75.53%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           + KD F+SV+M+H+RM GAYWGLT LD+LGKLD+V++DEV+SW+LKCQHESGGFSGNIG 
Sbjct: 18  KNKDSFESVVMDHLRMNGAYWGLTALDLLGKLDSVNVDEVISWILKCQHESGGFSGNIGH 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKVTDCILW 177
           DPHILYTLSAVQVLALF+KL+VLD+DKV  C L+
Sbjct: 78  DPHILYTLSAVQVLALFNKLDVLDIDKVATCWLY 111

[Close]

BLAST of Cla97C02G027990 vs. NCBI nr
Match: OIW19192.1 (hypothetical protein TanjilG_04935 [Lupinus angustifolius])

HSP 1 Score: 161.0 bits (406), Expect = 3.8e-36
Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           +RKDDF+SV+MEH+RM GAYWGLT LD++GKL+TVD+DEVVSWVL CQHESGGF GN+G 
Sbjct: 18  KRKDDFESVVMEHLRMNGAYWGLTALDLMGKLNTVDVDEVVSWVLSCQHESGGFGGNVGH 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKVT 172
           DPH+LYTLSAVQVLALF KL+++DVDKVT
Sbjct: 78  DPHLLYTLSAVQVLALFHKLDIIDVDKVT 106

[Close]

BLAST of Cla97C02G027990 vs. NCBI nr
Match: POE80651.1 (tricyclene synthase ebos, chloroplastic [Quercus suber])

HSP 1 Score: 161.0 bits (406), Expect = 3.8e-36
Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           +RKDDF SV+MEH+RM GAYW LTTLD+LGKLDTVD+DEVVSW +KCQHESGGF GNIG 
Sbjct: 18  KRKDDFVSVVMEHLRMNGAYWVLTTLDLLGKLDTVDLDEVVSWFMKCQHESGGFGGNIGD 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKV 171
           DPH++YTLSAVQVLALFDKLNVLD+DK+
Sbjct: 78  DPHVVYTLSAVQVLALFDKLNVLDIDKI 105

[Close]

BLAST of Cla97C02G027990 vs. NCBI nr
Match: POE80652.1 (tricyclene synthase ebos, chloroplastic [Quercus suber])

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-36
Identity = 72/87 (82.76%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           +RKDDF SV+MEH+RM GAYW LTTLD+LGKLDTVD+DEVVSW +KCQHESGGF GNIG 
Sbjct: 18  KRKDDFVSVVMEHLRMNGAYWVLTTLDLLGKLDTVDLDEVVSWFMKCQHESGGFGGNIGD 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDK 170
           DPH++YTLSAVQVLALFDKLNVLD+DK
Sbjct: 78  DPHVVYTLSAVQVLALFDKLNVLDIDK 104

[Close]

BLAST of Cla97C02G027990 vs. NCBI nr
Match: KJB31783.1 (hypothetical protein B456_005G208400 [Gossypium raimondii])

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 71/94 (75.53%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           + KD F+SV+M+H+RM GAYWGLT LD+LGKLD+V++DEV+SW+LKCQHESGGFSGNIG 
Sbjct: 18  KNKDSFESVVMDHLRMNGAYWGLTALDLLGKLDSVNVDEVISWILKCQHESGGFSGNIGH 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKVTDCILW 177
           DPHILYTLSAVQVLALF+KL+VLD+DKV  C  W
Sbjct: 78  DPHILYTLSAVQVLALFNKLDVLDIDKV--CYSW 109

[Close]

BLAST of Cla97C02G027990 vs. TrEMBL
Match: tr|A0A2P5QES8|A0A2P5QES8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD30048 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 71/94 (75.53%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           + KD F+SV+M+H+RM GAYWGLT LD+LGKLD+V++DEV+SW+LKCQHESGGFSGNIG 
Sbjct: 18  KNKDSFESVVMDHLRMNGAYWGLTALDLLGKLDSVNVDEVISWILKCQHESGGFSGNIGH 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKVTDCILW 177
           DPHILYTLSAVQVLALF+KL+VLD+DKV  C L+
Sbjct: 78  DPHILYTLSAVQVLALFNKLDVLDIDKVATCWLY 111

[Close]

BLAST of Cla97C02G027990 vs. TrEMBL
Match: tr|A0A2P4JIW2|A0A2P4JIW2_QUESU (Tricyclene synthase ebos, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_39290 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           +RKDDF SV+MEH+RM GAYW LTTLD+LGKLDTVD+DEVVSW +KCQHESGGF GNIG 
Sbjct: 18  KRKDDFVSVVMEHLRMNGAYWVLTTLDLLGKLDTVDLDEVVSWFMKCQHESGGFGGNIGD 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKV 171
           DPH++YTLSAVQVLALFDKLNVLD+DK+
Sbjct: 78  DPHVVYTLSAVQVLALFDKLNVLDIDKI 105

[Close]

BLAST of Cla97C02G027990 vs. TrEMBL
Match: tr|A0A1J7IXC4|A0A1J7IXC4_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_04935 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           +RKDDF+SV+MEH+RM GAYWGLT LD++GKL+TVD+DEVVSWVL CQHESGGF GN+G 
Sbjct: 18  KRKDDFESVVMEHLRMNGAYWGLTALDLMGKLNTVDVDEVVSWVLSCQHESGGFGGNVGH 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKVT 172
           DPH+LYTLSAVQVLALF KL+++DVDKVT
Sbjct: 78  DPHLLYTLSAVQVLALFHKLDIIDVDKVT 106

[Close]

BLAST of Cla97C02G027990 vs. TrEMBL
Match: tr|A0A2P4JIS6|A0A2P4JIS6_QUESU (Tricyclene synthase ebos, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_39290 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.3e-36
Identity = 72/87 (82.76%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           +RKDDF SV+MEH+RM GAYW LTTLD+LGKLDTVD+DEVVSW +KCQHESGGF GNIG 
Sbjct: 18  KRKDDFVSVVMEHLRMNGAYWVLTTLDLLGKLDTVDLDEVVSWFMKCQHESGGFGGNIGD 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDK 170
           DPH++YTLSAVQVLALFDKLNVLD+DK
Sbjct: 78  DPHVVYTLSAVQVLALFDKLNVLDIDK 104

[Close]

BLAST of Cla97C02G027990 vs. TrEMBL
Match: tr|A0A0D2PWN9|A0A0D2PWN9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G208400 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.6e-36
Identity = 71/94 (75.53%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 83  QRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNIGR 142
           + KD F+SV+M+H+RM GAYWGLT LD+LGKLD+V++DEV+SW+LKCQHESGGFSGNIG 
Sbjct: 18  KNKDSFESVVMDHLRMNGAYWGLTALDLLGKLDSVNVDEVISWILKCQHESGGFSGNIGH 77

Query: 143 DPHILYTLSAVQVLALFDKLNVLDVDKVTDCILW 177
           DPHILYTLSAVQVLALF+KL+VLD+DKV  C  W
Sbjct: 78  DPHILYTLSAVQVLALFNKLDVLDIDKV--CYSW 109

[Close]

BLAST of Cla97C02G027990 vs. Swiss-Prot
Match: sp|Q84J75|PGTB1_ARATH (Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana OX=3702 GN=RGTB1 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-25
Identity = 52/81 (64.20%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 76  HLR--LFYVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHES 135
           H+R  L   ++K+ F+SV+M+H+RM GAYWGLTTLD+L KL  V  +EV+SW++ CQHES
Sbjct: 17  HVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHES 76

Query: 136 GGFSGNIGRDPHILYTLSAVQ 155
           GGF+GN G DPHILYTLSAVQ
Sbjct: 77  GGFAGNTGHDPHILYTLSAVQ 97

[Close]

BLAST of Cla97C02G027990 vs. Swiss-Prot
Match: sp|Q9LHL5|PGTB2_ARATH (Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana OX=3702 GN=RGTB2 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-25
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 77  LRLFYVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGF 136
           L L   ++K+ F+SV+M+H+RM GAYWGLTTL +L KL +V  DEVVSWV+ CQHESGGF
Sbjct: 15  LNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGF 74

Query: 137 SGNIGRDPHILYTLSAV 154
           +GN G DPH+LYTLSAV
Sbjct: 75  AGNTGHDPHVLYTLSAV 91

[Close]

BLAST of Cla97C02G027990 vs. Swiss-Prot
Match: sp|Q5E9B3|PGTB2_BOVIN (Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus OX=9913 GN=RABGGTB PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.6e-20
Identity = 38/75 (50.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 81  YVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNI 140
           Y  +KDD++  M E++RM G YWGLT +D++G+L  ++ +E+++++  CQHE GG S +I
Sbjct: 30  YGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASI 89

Query: 141 GRDPHILYTLSAVQV 156
           G DPH+LYTLSAVQ+
Sbjct: 90  GHDPHLLYTLSAVQI 104

[Close]

BLAST of Cla97C02G027990 vs. Swiss-Prot
Match: sp|P53611|PGTB2_HUMAN (Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens OX=9606 GN=RABGGTB PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 7.6e-20
Identity = 38/75 (50.67%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 81  YVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNI 140
           Y  +KDD++  M E++RM G YWGLT +D++G+L  ++ +E+++++  CQHE GG S +I
Sbjct: 30  YGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASI 89

Query: 141 GRDPHILYTLSAVQV 156
           G DPH+LYTLSAVQ+
Sbjct: 90  GHDPHLLYTLSAVQI 104

[Close]

BLAST of Cla97C02G027990 vs. Swiss-Prot
Match: sp|P53612|PGTB2_MOUSE (Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus OX=10090 GN=Rabggtb PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18
Identity = 37/73 (50.68%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 81  YVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGFSGNI 140
           Y  +KDD++  M E++RM G YWGLT +D++G+L  ++ +E++ ++  CQHE GG S +I
Sbjct: 38  YGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASI 97

Query: 141 GRDPHILYTLSAV 154
           G DPH+LYTLSAV
Sbjct: 98  GHDPHLLYTLSAV 110

[Close]

BLAST of Cla97C02G027990 vs. TAIR10
Match: AT5G12210.1 (RAB geranylgeranyl transferase beta subunit 1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 52/81 (64.20%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 76  HLR--LFYVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHES 135
           H+R  L   ++K+ F+SV+M+H+RM GAYWGLTTLD+L KL  V  +EV+SW++ CQHES
Sbjct: 17  HVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHES 76

Query: 136 GGFSGNIGRDPHILYTLSAVQ 155
           GGF+GN G DPHILYTLSAVQ
Sbjct: 77  GGFAGNTGHDPHILYTLSAVQ 97

[Close]

BLAST of Cla97C02G027990 vs. TAIR10
Match: AT3G12070.1 (RAB geranylgeranyl transferase beta subunit 2)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-26
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 77  LRLFYVQRKDDFQSVMMEHIRMIGAYWGLTTLDILGKLDTVDIDEVVSWVLKCQHESGGF 136
           L L   ++K+ F+SV+M+H+RM GAYWGLTTL +L KL +V  DEVVSWV+ CQHESGGF
Sbjct: 15  LNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGF 74

Query: 137 SGNIGRDPHILYTLSAV 154
           +GN G DPH+LYTLSAV
Sbjct: 75  AGNTGHDPHVLYTLSAV 91

The following BLAST results are available for this feature:

BLAST of Cla97C02G027990 vs. NCBI nr


Match Name	E-value	Identity	Description
PPD73053.1	1.7e-36	75.53	hypothetical protein GOBAR_DD30048 [Gossypium barbadense]	[more]
OIW19192.1	3.8e-36	78.65	hypothetical protein TanjilG_04935 [Lupinus angustifolius]	[more]
POE80651.1	3.8e-36	81.82	tricyclene synthase ebos, chloroplastic [Quercus suber]	[more]
POE80652.1	6.5e-36	82.76	tricyclene synthase ebos, chloroplastic [Quercus suber]	[more]
KJB31783.1	1.4e-35	75.53	hypothetical protein B456_005G208400 [Gossypium raimondii]	[more]

BLAST of Cla97C02G027990 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5QES8\|A0A2P5QES8_GOSBA	1.1e-36	75.53	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD30048 PE=4 SV...	[more]
tr\|A0A2P4JIW2\|A0A2P4JIW2_QUESU	2.5e-36	81.82	Tricyclene synthase ebos, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_39290...	[more]
tr\|A0A1J7IXC4\|A0A1J7IXC4_LUPAN	2.5e-36	78.65	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_04935 PE=4 S...	[more]
tr\|A0A2P4JIS6\|A0A2P4JIS6_QUESU	4.3e-36	82.76	Tricyclene synthase ebos, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_39290...	[more]
tr\|A0A0D2PWN9\|A0A0D2PWN9_GOSRA	9.6e-36	75.53	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G208400 PE=4 ...	[more]

BLAST of Cla97C02G027990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84J75\|PGTB1_ARATH	2.7e-25	64.20	Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9LHL5\|PGTB2_ARATH	3.5e-25	66.23	Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q5E9B3\|PGTB2_BOVIN	7.6e-20	50.67	Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus OX=9913 GN=RABGGTB ...	[more]
sp\|P53611\|PGTB2_HUMAN	7.6e-20	50.67	Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens OX=9606 GN=RABGGT...	[more]
sp\|P53612\|PGTB2_MOUSE	1.4e-18	50.68	Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus OX=10090 GN=Rabgg...	[more]

BLAST of Cla97C02G027990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12210.1	1.5e-26	64.20	RAB geranylgeranyl transferase beta subunit 1	[more]
AT3G12070.1	2.0e-26	66.23	RAB geranylgeranyl transferase beta subunit 2	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR008930	Terpenoid_cyclase/PrenylTrfase
IPR001330	PFTB_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018344	protein geranylgeranylation
biological_process	GO:0018342	protein prenylation
cellular_component	GO:0005968	Rab-protein geranylgeranyltransferase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004663	Rab geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G027990.1	Cla97C02G027990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001330	PFTB repeat	PFAM	PF00432	Prenyltrans	coord: 118..158 e-value: 3.3E-11 score: 42.6
None	No IPR available	GENE3D	G3DSA:1.50.10.20		coord: 74..177 e-value: 2.6E-24 score: 87.8
None	No IPR available	PANTHER	PTHR11774:SF11	GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETA	coord: 82..174
None	No IPR available	PANTHER	PTHR11774	GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT	coord: 82..174
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	SSF48239	Terpenoid cyclases/Protein prenyltransferases	coord: 82..174

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G027990	Cla007703	Watermelon (97103) v1	wmwmbB324
Cla97C02G027990	MELO3C018787	Melon (DHL92) v3.5.1	mewmbB178
Cla97C02G027990	ClCG02G001540	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G027990	MELO3C018787.2	Melon (DHL92) v3.6.1	medwmbB164
Cla97C02G027990	Bhi05G001139	Wax gourd	wgowmbB241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G027990	Watermelon (97103) v2	wmbwmbB096
Cla97C02G027990	Silver-seed gourd	carwmbB0027
Cla97C02G027990	Silver-seed gourd	carwmbB0348
Cla97C02G027990	Silver-seed gourd	carwmbB0752
Cla97C02G027990	Silver-seed gourd	carwmbB0915
Cla97C02G027990	Silver-seed gourd	carwmbB0974
Cla97C02G027990	Cucumber (Gy14) v2	cgybwmbB502
Cla97C02G027990	Cucumber (Gy14) v1	cgywmbB248
Cla97C02G027990	Cucurbita maxima (Rimu)	cmawmbB105
Cla97C02G027990	Cucurbita maxima (Rimu)	cmawmbB221
Cla97C02G027990	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G027990	Cucurbita maxima (Rimu)	cmawmbB582
Cla97C02G027990	Cucurbita maxima (Rimu)	cmawmbB618
Cla97C02G027990	Cucurbita maxima (Rimu)	cmawmbB883
Cla97C02G027990	Cucurbita moschata (Rifu)	cmowmbB094
Cla97C02G027990	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G027990	Cucurbita moschata (Rifu)	cmowmbB552
Cla97C02G027990	Cucurbita moschata (Rifu)	cmowmbB593
Cla97C02G027990	Cucurbita moschata (Rifu)	cmowmbB650
Cla97C02G027990	Wild cucumber (PI 183967)	cpiwmbB030
Cla97C02G027990	Wild cucumber (PI 183967)	cpiwmbB553
Cla97C02G027990	Cucumber (Chinese Long) v3	cucwmbB549
Cla97C02G027990	Cucumber (Chinese Long) v2	cuwmbB029
Cla97C02G027990	Cucumber (Chinese Long) v2	cuwmbB529
Cla97C02G027990	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G027990	Watermelon (Charleston Gray)	wcgwmbB184
Cla97C02G027990	Watermelon (97103) v1	wmwmbB122