Cla97C02G027930 (gene) Watermelon (97103) v2

Overview
NameCla97C02G027930
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr02 : 1508111 .. 1508811 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAAGTTTAGGGTTATCGTTCAGGTACTGTCAGTCTGGCGTTGAATGCAACAATATAAAGCTAAAAGGGGCCTTTCTTTTCGTATTCATTGCCAGAAAAACAGGAGAAGAGCTTCTCTCTTCCATGAGATTGAAGTTTTTTTCATAACTATGTTGGGTGAGAAAGGTTAGATCATCGATTCTTTCATTTGTTTTGTGTGTATATATATTTTTTTAATTGCAACTTGTTTTCCTTAATGGGTTTCTCGTTTCATTGAAGATCAAGTCATCTCTGGATTTTGTTGGATTGTAAATCTTCATTTAAACTGAATCTCTGCCATAAAGTTGCTGAAATCTTGTTCTTGTTATTGCCTGAATTGTTATATAGGATTTGGAAACAGAACCATTTGCTGTATACATCTTCTTTAGATTGTTTTATCCTATGAATGGTTGTTTGTTTTATGAATCGGTATTTATATCTTCTTCTGGTTGTTTATCAGGTCTGCATCTCTTCTACATGTATTGGTTCGGGTTCCCCTAGTGGGCAAAAAAACTCTCTTCACTCTGGCAGCTGCAATTAGCTTGAATCCTTCTCGCACCTTCAAATGGGTGTGGGATAATGGAGTGATATCTCTTGGTGTTTTGAGGAAATCAAGATCATCGCACATTTGGAGATTGTGTCGTGTTTTAGAGGGTCGGTCGCTCGATTATGGTTAA

mRNA sequence

ATGGTGGAAAGTTTAGGGTTATCGTTCAGGTCTGCATCTCTTCTACATGTATTGGTTCGGGTTCCCCTAGTGGGCAAAAAAACTCTCTTCACTCTGGCAGCTGCAATTAGCTTGAATCCTTCTCGCACCTTCAAATGGGTGTGGGATAATGGAGTGATATCTCTTGGTGTTTTGAGGAAATCAAGATCATCGCACATTTGGAGATTGTGTCGTGTTTTAGAGGGTCGGTCGCTCGATTATGGTTAA

Coding sequence (CDS)

ATGGTGGAAAGTTTAGGGTTATCGTTCAGGTCTGCATCTCTTCTACATGTATTGGTTCGGGTTCCCCTAGTGGGCAAAAAAACTCTCTTCACTCTGGCAGCTGCAATTAGCTTGAATCCTTCTCGCACCTTCAAATGGGTGTGGGATAATGGAGTGATATCTCTTGGTGTTTTGAGGAAATCAAGATCATCGCACATTTGGAGATTGTGTCGTGTTTTAGAGGGTCGGTCGCTCGATTATGGTTAA

Protein sequence

MVESLGLSFRSASLLHVLVRVPLVGKKTLFTLAAAISLNPSRTFKWVWDNGVISLGVLRKSRSSHIWRLCRVLEGRSLDYG
Homology
[Close]
BLAST of Cla97C02G027930 vs. NCBI nr
Match: KGN43564.1 (hypothetical protein Csa_7G045530 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 58/70 (82.86%), Postives = 59/70 (84.29%), Query Frame = 0 

Query: 13 SLLHVLV-RVPLVGKKTLFTLAAAISLNPSRTFKWVWDNGVISLGVLRKSRSSHIWRLCR 72
          SLLHV +  V LV KKT FTLAAA S   SRTFKWVWDNGVISLGVLRKSRSSHIWRLCR
Sbjct: 11 SLLHVCIGLVSLVVKKTPFTLAAATSSKSSRTFKWVWDNGVISLGVLRKSRSSHIWRLCR 70

Query: 73 VLEGRSLDYG 82
          VLEG SLDYG
Sbjct: 71 VLEGLSLDYG 80

[Close]
BLAST of Cla97C02G027930 vs. TrEMBL
Match: tr|A0A0A0K3N3|A0A0A0K3N3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045530 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 58/70 (82.86%), Postives = 59/70 (84.29%), Query Frame = 0 

Query: 13 SLLHVLV-RVPLVGKKTLFTLAAAISLNPSRTFKWVWDNGVISLGVLRKSRSSHIWRLCR 72
          SLLHV +  V LV KKT FTLAAA S   SRTFKWVWDNGVISLGVLRKSRSSHIWRLCR
Sbjct: 11 SLLHVCIGLVSLVVKKTPFTLAAATSSKSSRTFKWVWDNGVISLGVLRKSRSSHIWRLCR 70

Query: 73 VLEGRSLDYG 82
          VLEG SLDYG
Sbjct: 71 VLEGLSLDYG 80

The following BLAST results are available for this feature:
BLAST of Cla97C02G027930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43564.12.0e-2182.86hypothetical protein Csa_7G045530 [Cucumis sativus][more]
BLAST of Cla97C02G027930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K3N3|A0A0A0K3N3_CUCSA1.3e-2182.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045530 PE=4 SV=1[more]
BLAST of Cla97C02G027930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G027930 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G027930.1Cla97C02G027930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G027930Csa7G045530Cucumber (Chinese Long) v2cuwmbB529
Cla97C02G027930CSPI07G04110Wild cucumber (PI 183967)cpiwmbB553
Cla97C02G027930CmaCh19G009490Cucurbita maxima (Rimu)cmawmbB531
Cla97C02G027930CmoCh19G009800Cucurbita moschata (Rifu)cmowmbB512
Cla97C02G027930CsGy7G003750Cucumber (Gy14) v2cgybwmbB502
Cla97C02G027930Carg19201Silver-seed gourdcarwmbB0915
Cla97C02G027930CsaV3_7G003970Cucumber (Chinese Long) v3cucwmbB549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G027930Watermelon (97103) v2wmbwmbB096
Cla97C02G027930Silver-seed gourdcarwmbB0027
Cla97C02G027930Silver-seed gourdcarwmbB0348
Cla97C02G027930Silver-seed gourdcarwmbB0752
Cla97C02G027930Silver-seed gourdcarwmbB0914
Cla97C02G027930Silver-seed gourdcarwmbB0974
Cla97C02G027930Cucumber (Gy14) v2cgybwmbB499
Cla97C02G027930Cucumber (Gy14) v1cgywmbB248
Cla97C02G027930Cucurbita maxima (Rimu)cmawmbB105
Cla97C02G027930Cucurbita maxima (Rimu)cmawmbB221
Cla97C02G027930Cucurbita maxima (Rimu)cmawmbB530
Cla97C02G027930Cucurbita maxima (Rimu)cmawmbB582
Cla97C02G027930Cucurbita maxima (Rimu)cmawmbB618
Cla97C02G027930Cucurbita maxima (Rimu)cmawmbB883
Cla97C02G027930Cucurbita moschata (Rifu)cmowmbB094
Cla97C02G027930Cucurbita moschata (Rifu)cmowmbB510
Cla97C02G027930Cucurbita moschata (Rifu)cmowmbB552
Cla97C02G027930Cucurbita moschata (Rifu)cmowmbB593
Cla97C02G027930Cucurbita moschata (Rifu)cmowmbB650
Cla97C02G027930Wild cucumber (PI 183967)cpiwmbB030
Cla97C02G027930Wild cucumber (PI 183967)cpiwmbB550
Cla97C02G027930Cucumber (Chinese Long) v3cucwmbB546
Cla97C02G027930Cucumber (Chinese Long) v2cuwmbB029
Cla97C02G027930Cucumber (Chinese Long) v2cuwmbB526
Cla97C02G027930Bottle gourd (USVL1VR-Ls)lsiwmbB085
Cla97C02G027930Bottle gourd (USVL1VR-Ls)lsiwmbB086
Cla97C02G027930Melon (DHL92) v3.6.1medwmbB164
Cla97C02G027930Melon (DHL92) v3.5.1mewmbB178
Cla97C02G027930Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G027930Watermelon (Charleston Gray)wcgwmbB184
Cla97C02G027930Watermelon (97103) v1wmwmbB122
Cla97C02G027930Watermelon (97103) v1wmwmbB324
Cla97C02G027930Wax gourdwgowmbB241
Cla97C02G027930Wax gourdwgowmbB365