Cla97C01G023100 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCTCCTATCTCCGCCAGACTTACCAACGGTGCCAAAGTCAAATCACCCTCATCTCCTTTCGCCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTAATACTTCGATCAAACTTCTCTGCTTTTTCGAATTTTGTTATGTGTCTGATGGGTTTTTATTTTGAAGGTCTCCTGTTGAGTTGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTTCTGAAGGTATATTCCTCCCCTTATTTCCGAATTTCTCTATGTAAATATCTGAATTGAATTTTCCCTTTTTTCATTTCTTTGAATTGAGTTTTTCCTATTGTCCTGTTTGGGTTTAGCTCTAGGTGTTGGTGATTCTACCTTCGTTAAGTGGCTAATAAGTTGGTTGGTTCTTATGGTTCTCTTATTCCCTAATTCAAGGTGGGGGTGGGGGGGTTTATACTTTAGGTGTGTTCAAAATGTGGCTGAGTGCAATGTTCATTGAGAATTTGAAAGAACAAATTTGTTCGTCTGGCTGGATAATTTTTAATTTGCATTTTCGTGAACCCATCTTTTACTCTCTTGCGCGATGAAAGAGTGCACATTGCTTTTCCTTTTGTAGGGCAAGACGATACTATTTGAGGTCTAAGCATCAAGGATGGTATGACTGGATTTATTTGTGTCCTCGACGTTTTGGAAATTGTGGTAAAATATTACTCGAGTAGATTATGTTTAAAAAAAAAAAAAAAAAACCATTCTTTTTGTGATGAAATTGAGTTGAGAGACTCAGACCTTTTGTTCCTATGACTTTATGGAATTAATGATCGGTCGTGGCTGATGAAATTCCAAACAATTTATTCAGTTCAGATCTTGTTATTCCGCATTGTTATGTGGAAAATGTTAATTTATGTTTATCCATTGCGTCCTTATAACTTAGACCAATATGATATAATGGTTCCATGTTTTGTTGTCAAAGAATTAGAATCCACTTGTGATGATTTAAGTCTTTCTTCTCTTAATTCTCTATGGTATTGCCGTCTAGCCATTGTCTGAATTTTCAACGATTAGACCCTCAAGATCTCCATCTTGATTTTTTCATTGGGGATGTTGAATTAATAATAGACCATAATAATGAGTCAGTTTGTGCAGTAGGTCGGGTTACTTATGAATTTTCTATTTCTTTTTGTTTGTTGATGGCATTAATTTTAGTAATATGACAAGTATGATATTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGA ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCTCCTATCTCCGCCAGACTTACCAACGGTGCCAAAGTCAAATCACCCTCATCTCCTTTCGCCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAGTTGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTTCTGAAGATTGCAATGATGATGTATGA ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCTCCTATCTCCGCCAGACTTACCAACGGTGCCAAAGTCAAATCACCCTCATCTCCTTTCGCCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAGTTGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTTCTGAAGATTGCAATGATGATGTATGA MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEDCNDDV
BLAST of Cla97C01G023100 vs. NCBI nr
Match: XP_022926143.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita moschata] >XP_022978784.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42 Identity = 96/101 (95.05%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of Cla97C01G023100 vs. NCBI nr
Match: XP_023543072.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.6 bits (449), Expect = 2.2e-41 Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Cla97C01G023100 vs. NCBI nr
Match: XP_004134688.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 7.0e-40 Identity = 92/101 (91.09%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Cla97C01G023100 vs. NCBI nr
Match: XP_022926144.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Cucurbita moschata] >XP_022926146.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Cucurbita moschata] >XP_022978786.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Cucurbita maxima] >XP_022978788.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Cucurbita maxima]) HSP 1 Score: 169.5 bits (428), Expect = 6.0e-39 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Cla97C01G023100 vs. NCBI nr
Match: XP_022926147.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X6 [Cucurbita moschata] >XP_022978789.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X6 [Cucurbita maxima]) HSP 1 Score: 169.5 bits (428), Expect = 6.0e-39 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TrEMBL
Match: tr|A0A0A0KHP8|A0A0A0KHP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518070 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 9.7e-38 Identity = 88/99 (88.89%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TrEMBL
Match: tr|M5WVX8|M5WVX8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.6e-27 Identity = 69/97 (71.13%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TrEMBL
Match: tr|A0A2P4LRX8|A0A2P4LRX8_QUESU (Protein nuclear fusion defective 6, chloroplastic/mitochondrial OS=Quercus suber OX=58331 GN=CFP56_17759 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.5e-27 Identity = 72/100 (72.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TrEMBL
Match: tr|V4U9L3|V4U9L3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017075mg PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 8.5e-26 Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TrEMBL
Match: tr|A0A067GQL9|A0A067GQL9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031795mg PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 8.5e-26 Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Cla97C01G023100 vs. Swiss-Prot
Match: sp|Q93ZJ3|NFD6_ARATH (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 5.9e-14 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TAIR10
Match: AT2G33847.1 (unknown protein) HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21 Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TAIR10
Match: AT1G28395.2 (unknown protein) HSP 1 Score: 84.0 bits (206), Expect = 6.0e-17 Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TAIR10
Match: AT2G20585.1 (nuclear fusion defective 6) HSP 1 Score: 78.2 bits (191), Expect = 3.3e-15 Identity = 50/101 (49.50%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TAIR10
Match: AT1G55205.2 (unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 4.7e-06 Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of Cla97C01G023100 vs. TAIR10
Match: AT5G47455.4 (unknown protein) HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |