Carg15308 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15308
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein nuclear fusion defective 6, chloroplastic/mitochondrial
Location	Cucurbita_argyrosperma_scaffold_085 : 271928 .. 273549 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTCCGAATTCCTTTGCTAAATCCCTAGAGCATGTCCTCCGCCGCTGCCATGGCTGCTAGATCAGCCTTCAGATCAACCCTAGCCCGAGCCACTATCTCCCGCAGACTTACCAATGGTGCCAAAGTGAAATCACCCGCATCTCCGTTCAGCATCCCCAAGCAGAATCCACTCTCCCAGTCCCATCGCATTTTGAGGTAAATTTTCGATGAAACTTCTTTGGTATTTCGAATTTTGTTATGTGTCTGATGGATTTTTATCTTGAAGATCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACGTCTATGCTTTCCGTTTCTCGTCGTAGCTACGGTTGGACTTCTGAAGGTACTTTCATGCTCTTATCGCCGGATTTTTCTATGTAAACATCTGTATTGCTTGTTCGTTCGTTTTTTTAATTAAGTTTTCCTCTTGTCCTGTTTAGCTTTTGCTTTGGGTTGGCGATTCTACCTTCTTTTAATGGCTAGGTTCTTATGGTTCCCTTATCCCTAATCCAAGGTGGTGGGGGGGTGTTATATCTTAGGTGCATTCAAAATGTGGTTGAGCAGTAAATGTTCATTGAGAATTTGAAAGAACAATTTTGTTCGTGTGGCTGGAGAATTTTTAATTTTCATTTTCGTCAACCCATCTTTTACTCTCTTGCGCGATGAAAGAGTGCACATTGCTTTTCCTTTTGTAGGACAAGACGAGACTATTTGAGGTCTCAGCATGAACGGTGGAATGACTGGATTTATTTTTGTTGTCGACTTTTTGGAAATTGTGGTAAAATATTTCTCGAGTGGATTGTGTTTGAAAACCATTCTTTTGTGGTGAATCCGAGCTCAGAGATTCAACCTTTTGTTCCTATGACTTTATGGAGTTAGTGGTCAGATTGATGGCTGATGAAATTCCAAATAAATTATTGAATTCAGATCTTGTTATTTTGAATCTTTAAGTGGAAAATTTTATTTGTATTCTATTTGTCCATTGGATCCTTAGGGCTTAGACCAATATGATATTCTGGTTCCATGTTTATAGTCTAAGAATTAGAATTCACTTGCTATGTTTTATGCTTTTCTTCTCTCAAGGCTCTATGGTCTAAGAATTAGAGCTCAATCTTGTTTATTTTATTGGGATCATGAATTAATATTAGACCATATTTAGTAGTCAGCTTTGTGATGAAAGTCAGGTTACCTTTGAATTTTCTTTTTCGTTTTGTGTTCATTGATGGCATTAATTTTAGTAATATGACAAGGGTGATATTGATTTCTTTTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGTTCGAGCACTTGCGCTCTAAAGACAAGATGCTGAAATAAAGTCATGTATTGCTAGTTTTTTCGTGTGCAAGTAGTTCAGTGATATTGGATTTATAGCTATAGGAAGAAACAAACTCATAACTGAGTTCACGTAGGTTGATATTCATGTTGGTGAGGCATAATTTTGTTATATTCACCATTCCTAATGACAGTTCACATCCTTGAGTTATCCTTGCTGTATAACTGTTCTTTCTCTTGAAACTTTGGGGACTTTACTTGAGTTC

mRNA sequence

AAATTTCCGAATTCCTTTGCTAAATCCCTAGAGCATGTCCTCCGCCGCTGCCATGGCTGCTAGATCAGCCTTCAGATCAACCCTAGCCCGAGCCACTATCTCCCGCAGACTTACCAATGGTGCCAAAGTGAAATCACCCGCATCTCCGTTCAGCATCCCCAAGCAGAATCCACTCTCCCAGTCCCATCGCATTTTGAGATCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACGTCTATGCTTTCCGTTTCTCGTCGTAGCTACGGTTGGACTTCTGAAGGTACTTTCATGCTCTTATCGCCGGATTTTTCTATGTAAACATCTGTATTGCTTGTTCGTTCGTTTTTTTAATTAAGTTTTCCTCTTGTCCTGTTTAGCTTTTGCTTTGGGTTGGCGATTCTACCTTCTTTTAATGGCTAGGTTCTTATGGTTCCCTTATCCCTAATCCAAGGTGGTGGGGGGGTGTTATATCTTAGGTGCATTCAAAATGTGGTTGAGCAGTAAATGTTCATTGAGAATTTGAAAGAACAATTTTGTTCGTGTGGCTGGAGAATTTTTAATTTTCATTTTCGTCAACCCATCTTTTACTCTCTTGCGCGATGAAAGAGTGCACATTGCTTTTCCTTTTGTAGGACAAGACGAGACTATTTGAGGTCTCAGCATGAACGGTGGAATGACTGGATTTATTTTTGTTGTCGACTTTTTGGAAATTGTGGTAAAATATTTCTCGAGTGGATTGTGTTTGAAAACCATTCTTTTGTGGTGAATCCGAGCTCAGAGATTCAACCTTTTGTTCCTATGACTTTATGGAGTTAGTGGTCAGATTGATGGCTGATGAAATTCCAAATAAATTATTGAATTCAGATCTTGTTATTTTGAATCTTTAAGTGGAAAATTTTATTTGTATTCTATTTGTCCATTGGATCCTTAGGGCTTAGACCAATATGATATTCTGGTTCCATGTTTATAGTCTAAGAATTAGAATTCACTTGCTATGTTTTATGCTTTTCTTCTCTCAAGGCTCTATGGTCTAAGAATTAGAGCTCAATCTTGTTTATTTTATTGGGATCATGAATTAATATTAGACCATATTTAGTAGTCAGCTTTGTGATGAAAGTCAGGTTACCTTTGAATTTTCTTTTTCGTTTTGTGTTCATTGATGGCATTAATTTTAGTAATATGACAAGGGTGATATTGATTTCTTTTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGTTCGAGCACTTGCGCTCTAAAGACAAGATGCTGAAATAAAGTCATGTATTGCTAGTTTTTTCGTGTGCAAGTAGTTCAGTGATATTGGATTTATAGCTATAGGAAGAAACAAACTCATAACTGAGTTCACGTAGGTTGATATTCATGTTGGTGAGGCATAATTTTGTTATATTCACCATTCCTAATGACAGTTCACATCCTTGAGTTATCCTTGCTGTATAACTGTTCTTTCTCTTGAAACTTTGGGGACTTTACTTGAGTTC

Coding sequence (CDS)

ATGTCCTCCGCCGCTGCCATGGCTGCTAGATCAGCCTTCAGATCAACCCTAGCCCGAGCCACTATCTCCCGCAGACTTACCAATGGTGCCAAAGTGAAATCACCCGCATCTCCGTTCAGCATCCCCAAGCAGAATCCACTCTCCCAGTCCCATCGCATTTTGAGATCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACGTCTATGCTTTCCGTTTCTCGTCGTAGCTACGGTTGGACTTCTGAAGGTACTTTCATGCTCTTATCGCCGGATTTTTCTATGTAA

Protein sequence

MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFMLLSPDFSM

Homology

[Close]

BLAST of Carg15308 vs. NCBI nr
Match: XP_022926140.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60
           MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM
Sbjct: 1   MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61  SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFMLLSPD 105
           SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  L P+
Sbjct: 61  SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGSYGSLIPN 104

[Close]

BLAST of Carg15308 vs. NCBI nr
Match: XP_022978782.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60
           MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM
Sbjct: 1   MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61  SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFMLLSPD 105
           SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  L P+
Sbjct: 61  SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGSYGSLIPN 104

[Close]

BLAST of Carg15308 vs. NCBI nr
Match: XP_022926145.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Cucurbita moschata] >XP_022978787.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60
          MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM
Sbjct: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGT 98
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG+
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGS 97

[Close]

BLAST of Carg15308 vs. NCBI nr
Match: XP_022926141.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022978785.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-41
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60
          MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM
Sbjct: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG 97
          SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Sbjct: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG 96

[Close]

BLAST of Carg15308 vs. NCBI nr
Match: XP_023543071.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 3.9e-41
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 1   MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60
           MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQS RILRSPVEM
Sbjct: 1   MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSPRILRSPVEM 60

Query: 61  SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTFMLLSPD 105
           SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG++  L P+
Sbjct: 61  SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGSYGSLIPN 104

[Close]

BLAST of Carg15308 vs. TAIR10
Match: AT2G33847.1 (unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 4.4e-18
Identity = 52/86 (60.47%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 8  AARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCVESL 67
          AARS FRS + RA ++   +      S  S F +PKQ+PL  SHRI RSPVE+SCCVE++
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPL--SHRIFRSPVELSCCVETM 62

Query: 68 LPYHSATASALLTSMLSVSRRSYGWT 94
          LPYH+ATASALL SMLSVS RS  WT
Sbjct: 63 LPYHTATASALLNSMLSVSGRSI-WT 85

[Close]

BLAST of Carg15308 vs. TAIR10
Match: AT1G28395.2 (unknown protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-16
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 8  AARSAFRSTLARATISR-RLTNGAK--VKSPASPFSIPKQNPLSQSHRILRSPVEMSCCV 67
          AARS FRS  +RA+ +  R + G K    S  + F +PKQ+PL  ++RI RSPVE+SCCV
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPL--TNRIFRSPVELSCCV 62

Query: 68 ESLLPYHSATASALLTSMLSVSRRSYGWTSEG 97
          E++LPYH+ATASALL SMLSVSRR  GW  +G
Sbjct: 63 ETMLPYHTATASALLNSMLSVSRR--GWIVDG 90

[Close]

BLAST of Carg15308 vs. TAIR10
Match: AT2G20585.1 (nuclear fusion defective 6)

HSP 1 Score: 64.3 bits (155), Expect = 5.2e-11
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 2  SSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPF-SIPKQNPLSQSHRILRSPVEM 61
          +SA    ARS  R+  +R+  +      ++ KS    F +  +++PL      LR+PVE+
Sbjct: 3  TSAVLSGARSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSP---LRNPVEL 62

Query: 62 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 96
          S CVESLLPYHSATASAL+TS LS+S ++YGW S+
Sbjct: 63 SFCVESLLPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]

BLAST of Carg15308 vs. TAIR10
Match: AT1G55205.2 (unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.0e-06
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 38 PFSIPKQNPLSQSHRI---LRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTS 97
          P  I   +P S + RI    R PVE+SCC+ S+LP HSA ASA L S LSV  +S+G   
Sbjct: 32 PSPIKSSSPSSATSRINQSFRLPVELSCCL-SMLPLHSAIASARLISSLSVESKSWGLVP 91

[Close]

BLAST of Carg15308 vs. TAIR10
Match: AT4G17310.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 5.5e-05
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 39  FSIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGTF 98
           F +P Q   ++     R P E+  CV+SLLP HS  A+A LTS LS + RS    S+GT 
Sbjct: 36  FRLPSQP--TRHFSFSRCPSELG-CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTL 95

Query: 99  MLLSPD 105
              SPD
Sbjct: 96  CCTSPD 98

[Close]

BLAST of Carg15308 vs. Swiss-Prot
Match: sp|Q93ZJ3|NFD6_ARATH (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 9.3e-10
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 2  SSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPF-SIPKQNPLSQSHRILRSPVEM 61
          +SA    ARS  R+  +R+  +      ++ KS    F +  +++PL      LR+PVE+
Sbjct: 3  TSAVLSGARSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSP---LRNPVEL 62

Query: 62 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 96
          S CVESLLPYHSATASAL+TS LS+S ++YGW S+
Sbjct: 63 SFCVESLLPYHSATASALMTSKLSISGQTYGWLSD 94

[Close]

BLAST of Carg15308 vs. TrEMBL
Match: tr|A0A0A0KHP8|A0A0A0KHP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518070 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.9e-34
Identity = 83/95 (87.37%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MSSAAAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEM 60
          MSSAAAMAARSAFRSTLARA IS R T+ AK KS  SPF+IPKQNPLSQSHRILRSPVE+
Sbjct: 1  MSSAAAMAARSAFRSTLARAPISGRFTSSAKTKSAPSPFAIPKQNPLSQSHRILRSPVEL 60

Query: 61 SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE 96
          SCC+ESLLPYHSATASALLTSMLSVSRRSYGWT E
Sbjct: 61 SCCLESLLPYHSATASALLTSMLSVSRRSYGWTPE 95

[Close]

BLAST of Carg15308 vs. TrEMBL
Match: tr|M5WIE2|M5WIE2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 5  AAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCV 64
          A+ AARS  RST ARAT+  RL + A+ K  +SPF IPK N  S S RI RSPVE+SCCV
Sbjct: 2  ASFAARSVLRSTAARATVGSRLASAARPKPASSPFRIPKLNQSSTSPRIFRSPVELSCCV 61

Query: 65 ESLLPYHSATASALLTSMLSVSRRSYGWTSEG 97
          E++LPYH+ATASALLTSMLSVS+RSYGWT EG
Sbjct: 62 ETMLPYHTATASALLTSMLSVSQRSYGWTPEG 93

[Close]

BLAST of Carg15308 vs. TrEMBL
Match: tr|A0A251PG24|A0A251PG24_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 5  AAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCV 64
          A+ AARS  RST ARAT+  RL + A+ K  +SPF IPK N  S S RI RSPVE+SCCV
Sbjct: 2  ASFAARSVLRSTAARATVGSRLASAARPKPASSPFRIPKLNQSSTSPRIFRSPVELSCCV 61

Query: 65 ESLLPYHSATASALLTSMLSVSRRSYGWTSEG 97
          E++LPYH+ATASALLTSMLSVS+RSYGWT EG
Sbjct: 62 ETMLPYHTATASALLTSMLSVSQRSYGWTPEG 93

[Close]

BLAST of Carg15308 vs. TrEMBL
Match: tr|A0A251PG47|A0A251PG47_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 5  AAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCV 64
          A+ AARS  RST ARAT+  RL + A+ K  +SPF IPK N  S S RI RSPVE+SCCV
Sbjct: 2  ASFAARSVLRSTAARATVGSRLASAARPKPASSPFRIPKLNQSSTSPRIFRSPVELSCCV 61

Query: 65 ESLLPYHSATASALLTSMLSVSRRSYGWTSEG 97
          E++LPYH+ATASALLTSMLSVS+RSYGWT EG
Sbjct: 62 ETMLPYHTATASALLTSMLSVSQRSYGWTPEG 93

[Close]

BLAST of Carg15308 vs. TrEMBL
Match: tr|A0A251PG35|A0A251PG35_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 5  AAMAARSAFRSTLARATISRRLTNGAKVKSPASPFSIPKQNPLSQSHRILRSPVEMSCCV 64
          A+ AARS  RST ARAT+  RL + A+ K  +SPF IPK N  S S RI RSPVE+SCCV
Sbjct: 2  ASFAARSVLRSTAARATVGSRLASAARPKPASSPFRIPKLNQSSTSPRIFRSPVELSCCV 61

Query: 65 ESLLPYHSATASALLTSMLSVSRRSYGWTSEG 97
          E++LPYH+ATASALLTSMLSVS+RSYGWT EG
Sbjct: 62 ETMLPYHTATASALLTSMLSVSQRSYGWTPEG 93

The following BLAST results are available for this feature:

BLAST of Carg15308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926140.1	2.7e-42	94.23	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_022978782.1	2.7e-42	94.23	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
XP_022926145.1	2.3e-41	98.97	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 ...	[more]
XP_022926141.1	3.0e-41	100.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
XP_023543071.1	3.9e-41	93.27	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]

BLAST of Carg15308 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33847.1	4.4e-18	60.47	unknown protein	[more]
AT1G28395.2	1.1e-16	57.61	unknown protein	[more]
AT2G20585.1	5.2e-11	45.26	nuclear fusion defective 6	[more]
AT1G55205.2	5.0e-06	48.39	unknown protein	[more]
AT4G17310.1	5.5e-05	43.94	unknown protein	[more]

BLAST of Carg15308 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93ZJ3\|NFD6_ARATH	9.3e-10	45.26	Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]

BLAST of Carg15308 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHP8\|A0A0A0KHP8_CUCSA	6.9e-34	87.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518070 PE=4 SV=1	[more]
tr\|M5WIE2\|M5WIE2_PRUPE	1.4e-23	68.48	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1	[more]
tr\|A0A251PG24\|A0A251PG24_PRUPE	1.4e-23	68.48	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1	[more]
tr\|A0A251PG47\|A0A251PG47_PRUPE	1.4e-23	68.48	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1	[more]
tr\|A0A251PG35\|A0A251PG35_PRUPE	1.4e-23	68.48	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G051800 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000741	karyogamy

Vocabulary: **INTERPRO**
Term	Definition
IPR033251	NFD6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15308-RA	Carg15308-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..47
None	No IPR available	PANTHER	PTHR33156	FAMILY NOT NAMED	coord: 5..96
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial	PANTHER	PTHR33156:SF10	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 5..96

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15308	Cla009638	Watermelon (97103) v1	carwmB0545
Carg15308	Csa6G518070	Cucumber (Chinese Long) v2	carcuB0578
Carg15308	ClCG01G023210	Watermelon (Charleston Gray)	carwcgB0531
Carg15308	CSPI06G34860	Wild cucumber (PI 183967)	carcpiB0584
Carg15308	Cucsa.046430	Cucumber (Gy14) v1	carcgyB0623
Carg15308	CmaCh07G002240	Cucurbita maxima (Rimu)	carcmaB0766
Carg15308	CmoCh03G012810	Cucurbita moschata (Rifu)	carcmoB0742
Carg15308	Lsi01G002960	Bottle gourd (USVL1VR-Ls)	carlsiB496
Carg15308	Cp4.1LG10g05240	Cucurbita pepo (Zucchini)	carcpeB0772
Carg15308	CsGy6G034380	Cucumber (Gy14) v2	carcgybB0554
Carg15308	MELO3C032902.2	Melon (DHL92) v3.6.1	carmedB0560
Carg15308	CsaV3_6G050360	Cucumber (Chinese Long) v3	carcucB0585
Carg15308	Cla97C01G023100	Watermelon (97103) v2	carwmbB0571
Carg15308	Bhi10G001051	Wax gourd	carwgoB0655

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15308	Carg07767	Silver-seed gourd	carcarB507

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15308	Silver-seed gourd	carcarB174
Carg15308	Silver-seed gourd	carcarB509
Carg15308	Cucumber (Gy14) v2	carcgybB0551
Carg15308	Cucumber (Gy14) v1	carcgyB0625
Carg15308	Cucurbita maxima (Rimu)	carcmaB0761
Carg15308	Cucurbita maxima (Rimu)	carcmaB0762
Carg15308	Cucurbita maxima (Rimu)	carcmaB0763
Carg15308	Cucurbita moschata (Rifu)	carcmoB0739
Carg15308	Cucurbita moschata (Rifu)	carcmoB0741
Carg15308	Cucurbita moschata (Rifu)	carcmoB0745
Carg15308	Cucurbita pepo (Zucchini)	carcpeB0771
Carg15308	Cucurbita pepo (Zucchini)	carcpeB0773
Carg15308	Wild cucumber (PI 183967)	carcpiB0581
Carg15308	Cucumber (Chinese Long) v2	carcuB0575
Carg15308	Cucumber (Chinese Long) v3	carcucB0582
Carg15308	Bottle gourd (USVL1VR-Ls)	carlsiB497
Carg15308	Melon (DHL92) v3.5.1	carmeB0551
Carg15308	Melon (DHL92) v3.5.1	carmeB0554
Carg15308	Melon (DHL92) v3.6.1	carmedB0557
Carg15308	Watermelon (Charleston Gray)	carwcgB0532
Carg15308	Watermelon (97103) v1	carwmB0544
Carg15308	Watermelon (97103) v2	carwmbB0573
Carg15308	Wax gourd	carwgoB0657
Carg15308	Wax gourd	carwgoB0659